RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 ANXA10Q9UJ72 324 aa19.91■□□□□ 0.78
USP48-214ENST00000532737 TMEM89A2RUT3 159 aa19.9■□□□□ 0.78
USP48-214ENST00000532737 FAM90A9PA6NNJ1 464 aa19.9■□□□□ 0.78
USP48-214ENST00000532737 LANCL1O43813 399 aa19.9■□□□□ 0.78
USP48-214ENST00000532737 CBX5P45973 191 aa19.9■□□□□ 0.78
USP48-214ENST00000532737 MOB3BQ86TA1 216 aa19.9■□□□□ 0.78
USP48-214ENST00000532737 TGIF2LXQ8IUE1 241 aa19.9■□□□□ 0.78
USP48-214ENST00000532737 SNX29P2Q8IUI4 249 aa19.9■□□□□ 0.78
USP48-214ENST00000532737 BEST4Q8NFU0 473 aa19.9■□□□□ 0.78
USP48-214ENST00000532737 CAPSLQ8WWF8 208 aa19.9■□□□□ 0.78
USP48-214ENST00000532737 EDARADDQ8WWZ3 215 aa19.9■□□□□ 0.78
USP48-214ENST00000532737 ABHD14BQ96IU4 210 aa19.9■□□□□ 0.78
USP48-214ENST00000532737 DCUN1D5Q9BTE7 237 aa19.9■□□□□ 0.78
USP48-214ENST00000532737 RNF150Q9ULK6 438 aa19.9■□□□□ 0.78
USP48-214ENST00000532737 DPPA5A6NC42 116 aa19.89■□□□□ 0.77
USP48-214ENST00000532737 RPL15P61313 204 aaKnown RBP19.89■□□□□ 0.77
USP48-214ENST00000532737 CNIH2Q6PI25 160 aa19.89■□□□□ 0.77
USP48-214ENST00000532737 LIAT1Q6ZQX7 453 aa19.89■□□□□ 0.77
USP48-214ENST00000532737 H1FOOQ8IZA3 346 aaPredicted RBP19.89■□□□□ 0.77
USP48-214ENST00000532737 ZNF251Q9BRH9 671 aa19.89■□□□□ 0.77
USP48-214ENST00000532737 GINS4Q9BRT9 223 aa19.89■□□□□ 0.77
USP48-214ENST00000532737 NXF2Q9GZY0 626 aaKnown RBP19.89■□□□□ 0.77
USP48-214ENST00000532737 PITPNC1Q9UKF7 332 aa19.89■□□□□ 0.77
USP48-214ENST00000532737 SAA2-SAA4A0A096LPE2 208 aa19.88■□□□□ 0.77
USP48-214ENST00000532737 IGHV3-72A0A0B4J1Y9 119 aa19.88■□□□□ 0.77
USP48-214ENST00000532737 CTXN2P0C2S0 81 aa19.88■□□□□ 0.77
USP48-214ENST00000532737 SAA2P0DJI9 122 aaPredicted RBP19.88■□□□□ 0.77
USP48-214ENST00000532737 HABP2Q14520 560 aaPredicted RBP19.88■□□□□ 0.77
USP48-214ENST00000532737 DHRS7BQ6IAN0 325 aaPredicted RBP19.88■□□□□ 0.77
USP48-214ENST00000532737 ZNF833PQ6ZTB9 187 aa19.88■□□□□ 0.77
USP48-214ENST00000532737 THNSL2Q86YJ6 484 aa19.88■□□□□ 0.77
USP48-214ENST00000532737 MCFD2Q8NI22 146 aa19.88■□□□□ 0.77
USP48-214ENST00000532737 SNAPC3Q92966 411 aa19.88■□□□□ 0.77
USP48-214ENST00000532737 C6orf62Q9GZU0 229 aaPredicted RBP19.88■□□□□ 0.77
USP48-214ENST00000532737 ANAPC10Q9UM13 185 aa19.88■□□□□ 0.77
USP48-214ENST00000532737 SNRNP70P08621 437 aaKnown RBP19.87■□□□□ 0.77
USP48-214ENST00000532737 RPL39P5Q59GN2 51 aa19.87■□□□□ 0.77
USP48-214ENST00000532737 GPX8Q8TED1 209 aa19.87■□□□□ 0.77
USP48-214ENST00000532737 PIPOXQ9P0Z9 390 aa19.87■□□□□ 0.77
USP48-214ENST00000532737 ADAM30Q9UKF2 790 aa19.87■□□□□ 0.77
USP48-214ENST00000532737 ZNF736B4DX44 427 aaPredicted RBP19.86■□□□□ 0.77
USP48-214ENST00000532737 RAB29O14966 203 aa19.86■□□□□ 0.77
USP48-214ENST00000532737 TXNL1O43396 289 aa19.86■□□□□ 0.77
USP48-214ENST00000532737 LPLP06858 475 aa19.86■□□□□ 0.77
USP48-214ENST00000532737 OR8U9P0C7N5 309 aa19.86■□□□□ 0.77
USP48-214ENST00000532737 FAM106CPP0CH98 169 aa19.86■□□□□ 0.77
USP48-214ENST00000532737 FOXB2Q5VYV0 432 aa19.86■□□□□ 0.77
USP48-214ENST00000532737 OR8U1Q8NH10 309 aa19.86■□□□□ 0.77
USP48-214ENST00000532737 DGCR14Q96DF8 476 aaKnown RBP19.86■□□□□ 0.77
USP48-214ENST00000532737 RBMXL1Q96E39 390 aaKnown RBP19.86■□□□□ 0.77
USP48-214ENST00000532737 MRPL20Q9BYC9 149 aaKnown RBP19.86■□□□□ 0.77
USP48-214ENST00000532737 RAB18Q9NP72 206 aa19.86■□□□□ 0.77
USP48-214ENST00000532737 IFT46Q9NQC8 304 aa19.86■□□□□ 0.77
USP48-214ENST00000532737 NDUFA13Q9P0J0 144 aa19.86■□□□□ 0.77
USP48-214ENST00000532737 HAX1O00165 279 aa19.85■□□□□ 0.77
USP48-214ENST00000532737 PROP1O75360 226 aa19.85■□□□□ 0.77
USP48-214ENST00000532737 NDUFA7O95182 113 aa19.85■□□□□ 0.77
USP48-214ENST00000532737 NFYAP23511 347 aaPredicted RBP19.85■□□□□ 0.77
USP48-214ENST00000532737 RAG2P55895 527 aa19.85■□□□□ 0.77
USP48-214ENST00000532737 ARPC4P59998 168 aa19.85■□□□□ 0.77
USP48-214ENST00000532737 Q6ZSV7 163 aa19.85■□□□□ 0.77
USP48-214ENST00000532737 ABHD1Q96SE0 405 aa19.85■□□□□ 0.77
USP48-214ENST00000532737 NABP2Q9BQ15 211 aa19.85■□□□□ 0.77
USP48-214ENST00000532737 GHITMQ9H3K2 345 aa19.85■□□□□ 0.77
USP48-214ENST00000532737 SCPEP1Q9HB40 452 aa19.85■□□□□ 0.77
USP48-214ENST00000532737 TENM1Q9UKZ4 2725 aa19.85■□□□□ 0.77
USP48-214ENST00000532737 TPPPO94811 219 aa19.84■□□□□ 0.77
USP48-214ENST00000532737 IGKV1D-33P01593 117 aa19.84■□□□□ 0.77
USP48-214ENST00000532737 IGKV1-33P01594 117 aa19.84■□□□□ 0.77
USP48-214ENST00000532737 NAT1P18440 290 aa19.84■□□□□ 0.77
USP48-214ENST00000532737 CD1BP29016 333 aa19.84■□□□□ 0.77
USP48-214ENST00000532737 S1PR3Q99500 378 aa19.84■□□□□ 0.77
USP48-214ENST00000532737 ZNF221Q9UK13 617 aa19.84■□□□□ 0.77
USP48-214ENST00000532737 GPR12P47775 334 aa19.83■□□□□ 0.77
USP48-214ENST00000532737 FOXL1Q12952 345 aa19.83■□□□□ 0.77
USP48-214ENST00000532737 LSAMPQ13449 338 aa19.83■□□□□ 0.77
USP48-214ENST00000532737 EBI3Q14213 229 aa19.83■□□□□ 0.77
USP48-214ENST00000532737 HES1Q14469 280 aa19.83■□□□□ 0.77
USP48-214ENST00000532737 HNF4GQ14541 408 aa19.83■□□□□ 0.77
USP48-214ENST00000532737 FAM71F2Q6NXP2 309 aa19.83■□□□□ 0.77
USP48-214ENST00000532737 OR5AP2Q8NGF4 316 aa19.83■□□□□ 0.77
USP48-214ENST00000532737 DIRAS2Q96HU8 199 aa19.83■□□□□ 0.77
USP48-214ENST00000532737 RBM14Q96PK6 669 aaKnown RBP19.83■□□□□ 0.77
USP48-214ENST00000532737 SLC25A33Q9BSK2 321 aa19.83■□□□□ 0.77
USP48-214ENST00000532737 OR2W1Q9Y3N9 320 aa19.83■□□□□ 0.77
USP48-214ENST00000532737 J3QRK9 145 aa19.82■□□□□ 0.76
USP48-214ENST00000532737 SULT1C2O00338 296 aa19.82■□□□□ 0.76
USP48-214ENST00000532737 TUSC2O75896 110 aa19.82■□□□□ 0.76
USP48-214ENST00000532737 TSPAN9O75954 239 aa19.82■□□□□ 0.76
USP48-214ENST00000532737 OR2F2O95006 317 aa19.82■□□□□ 0.76
USP48-214ENST00000532737 CT45A6P0DMU7 189 aa19.82■□□□□ 0.76
USP48-214ENST00000532737 CT45A5P0DMU8 189 aa19.82■□□□□ 0.76
USP48-214ENST00000532737 CT45A7P0DMV0 189 aa19.82■□□□□ 0.76
USP48-214ENST00000532737 TMEM11P17152 192 aa19.82■□□□□ 0.76
USP48-214ENST00000532737 MDKP21741 143 aaPredicted RBP19.82■□□□□ 0.76
USP48-214ENST00000532737 TNFSF8P32971 234 aa19.82■□□□□ 0.76
USP48-214ENST00000532737 COMPP49747 757 aaPredicted RBP19.82■□□□□ 0.76
USP48-214ENST00000532737 RNASE12Q5GAN4 147 aaKnown RBP19.82■□□□□ 0.76
USP48-214ENST00000532737 LYSMD2Q8IV50 215 aa19.82■□□□□ 0.76
USP48-214ENST00000532737 OR4F5Q8NH21 305 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms