RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 ZNF714Q96N38 554 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 DUX5Q96PT3 197 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 RAB40CQ96S21 281 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 UQCC2Q9BRT2 126 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 YTHDF1Q9BYJ9 559 aaKnown RBP4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 SLITRK2Q9H156 845 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 PPA2Q9H2U2 334 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 HEXA-AS1Q9H8Q6 139 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 ACOT13Q9NPJ3 140 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 ESM1Q9NQ30 184 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 ST3GAL6Q9Y274 331 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 MRPS28Q9Y2Q9 187 aaKnown RBP4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 LINC00312Q9Y6C7 94 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 CUBNO60494 3623 aa4.7□□□□□ -1.66
HMGB1P42-201ENST00000532126 TRGV10A0A0A0MS01 117 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 LOC100506127A0A0U1RQW1 187 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 ODAMA1E959 279 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 MEIOCA2RUB1 952 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 C17orf98A8MV24 154 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 CLDN34H7C241 214 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 GEMIN2O14893 280 aaKnown RBP4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 SC5DO75845 299 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 ARL6IP5O75915 188 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 OR7C1O76099 320 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 CSN2P05814 226 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 MELTFP08582 738 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 FBP1P09467 338 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 UCHL1P09936 223 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 IGHV1-8P0DP01 117 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 SRMP19623 302 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 COX7A1P24310 79 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 SAA4P35542 130 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 GLIPR1P48060 266 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 DLX6P56179 175 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 RBM11P57052 281 aaKnown RBP4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 EMX1Q04741 257 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 FGL1Q08830 312 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 ATXN7L3Q14CW9 347 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 SLC9A3R2Q15599 337 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 Q3ZCU0 254 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 MIDNQ504T8 468 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 PDLIM3Q53GG5 364 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 PAN3Q58A45 887 aaKnown RBP4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 NHLRC3Q5JS37 347 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 GLT8D1Q68CQ7 371 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 AWAT2Q6E213 333 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 HCP5Q6MZN7 132 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 ZNF782Q6ZMW2 699 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 TCF23Q7RTU1 214 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 LINC00596Q86U02 117 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 LRRTM1Q86UE6 522 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 CROCCP3Q8IVE0 287 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 OR4D6Q8NGJ1 314 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 OR13D1Q8NGV5 346 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 C17orf50Q8WW18 174 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 MRPS24Q96EL2 167 aaKnown RBP4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 C1orf147Q96MC9 270 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 BARHL1Q9BZE3 327 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 GAL3ST2Q9H3Q3 398 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 AUNIPQ9H7T9 357 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 TNFRSF19Q9NS68 423 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 GHRLQ9UBU3 117 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 PEF1Q9UBV8 284 aaKnown RBP4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 LRRC42Q9Y546 428 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 ARHGAP32A7KAX9 2087 aa4.69□□□□□ -1.66
HMGB1P42-201ENST00000532126 MEIKINA0A087WXM9 373 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 LOC100996750A0A140TA64 210 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 A0A1W2PP11 408 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 BTBD17A6NE02 478 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 RRHO14718 337 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 CRTAPO75718 401 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 CLPXO76031 633 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 SCGNO76038 276 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 IGHV4-59P01825 116 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 ARG1P05089 322 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 S100A6P06703 90 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 UBBP0CG47 229 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 MGMTP16455 207 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 JUNBP17275 347 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 PSMB9P28065 219 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 KCNJ3P48549 501 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 FABP5Q01469 135 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 DYNC1I2Q13409 638 aaKnown RBP4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 SSX1Q16384 188 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 TAF9Q16594 264 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 MPV17LQ2QL34 196 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 ATAD3CQ5T2N8 411 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 ZNF773Q6PK81 442 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 TMEM91Q6ZNR0 172 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 LYPD6Q86Y78 171 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 LDLRAD3Q86YD5 345 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 TMEM86BQ8N661 226 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 ZNF565Q8N9K5 539 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 SUMF2Q8NBJ7 301 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 OR5M8Q8NGP6 311 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 MITD1Q8WV92 249 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 TMEM18Q96B42 140 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 COQ2Q96H96 371 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 GRAMD2BQ96HH9 432 aa4.68□□□□□ -1.66
HMGB1P42-201ENST00000532126 ALKBH7Q9BT30 221 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms