RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 BEST4Q8NFU0 473 aa4.15□□□□□ -1.75
ECHDC1-222ENST00000531967 OR10AD1Q8NGE0 317 aa4.15□□□□□ -1.75
ECHDC1-222ENST00000531967 APOBEC3DQ96AK3 386 aaPredicted RBP4.15□□□□□ -1.75
ECHDC1-222ENST00000531967 CMBLQ96DG6 245 aa4.15□□□□□ -1.75
ECHDC1-222ENST00000531967 OR2M2Q96R28 347 aa4.15□□□□□ -1.75
ECHDC1-222ENST00000531967 OR4K3Q96R72 315 aa4.15□□□□□ -1.75
ECHDC1-222ENST00000531967 KLK15Q9H2R5 256 aa4.15□□□□□ -1.75
ECHDC1-222ENST00000531967 CALML5Q9NZT1 146 aa4.15□□□□□ -1.75
ECHDC1-222ENST00000531967 TRMT112Q9UI30 125 aaKnown RBP4.15□□□□□ -1.75
ECHDC1-222ENST00000531967 ZNF230Q9UIE0 474 aaPredicted RBP4.15□□□□□ -1.75
ECHDC1-222ENST00000531967 NHSL1Q5SYE7 1610 aa4.15□□□□□ -1.75
ECHDC1-222ENST00000531967 SIPA1L1O43166 1804 aa4.15□□□□□ -1.75
ECHDC1-222ENST00000531967 C8orf87E5RJ46 101 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 MRPS14O60783 128 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 APOC3P02656 99 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 C1QTNF8P60827 252 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 ERVK-16P61578 105 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 Q0VFX4 171 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 FCN2Q15485 313 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 GSG1Q2KHT4 349 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 IAH1Q2TAA2 248 aaPredicted RBP4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 GOLT1AQ6ZVE7 132 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 OOSP2Q86WS3 158 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 C9orf40Q8IXQ3 194 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 OR2T4Q8NH00 348 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 RPUSD4Q96CM3 377 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 BMFQ96LC9 184 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 EBPLQ9BY08 206 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 POMKQ9H5K3 350 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 GNB4Q9HAV0 340 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 SIX2Q9NPC8 291 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 LYRM2Q9NU23 88 aaPredicted RBP4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 HDGFL3Q9Y3E1 203 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 XIRP1Q702N8 1843 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 POLR2AP24928 1970 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 PTPRFP10586 1907 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 BAZ2AQ9UIF9 1905 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 TRAV8-6A0A0B4J262 113 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 H0Y9J4 135 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 K7EQD1 137 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 TNFSF15O95150 251 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 NXPH4O95158 308 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 ATP5G1P05496 136 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 CELA2AP08217 269 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 H2AFZP0C0S5 128 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 OR4A8P0C604 315 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 CERS1P27544 350 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 H2BFSP57053 126 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 PRR3P79522 188 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 SLC10A1Q14973 349 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 TSPO2Q5TGU0 170 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 H2AFVQ71UI9 128 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 PTAR1Q7Z6K3 402 aaPredicted RBP4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 OR5AP2Q8NGF4 316 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 ORAOV1Q8WV07 137 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 CNRIP1Q96F85 164 aaPredicted RBP4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 HSPB9Q9BQS6 159 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 ZNF436Q9C0F3 470 aaPredicted RBP4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 SH3BGRL3Q9H299 93 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 OR51I2Q9H344 312 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 PRO1933Q9H354 126 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 MED29Q9NX70 200 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 XCL2Q9UBD3 114 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 PHLPP1O60346 1717 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 ROBO3Q96MS0 1386 aa4.14□□□□□ -1.75
ECHDC1-222ENST00000531967 CACNA1SQ13698 1873 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 CDK5RAP2Q96SN8 1893 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 TRAV39A0A0B4J263 110 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 IGHV3OR16-9A0A0B4J2B5 98 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 PDCD6O75340 191 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 IGHG1P01857 330 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 PIGPP57054 158 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 SNRPD2P62316 118 aaKnown RBP4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 MRPS10P82664 201 aaKnown RBP4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 C1orf194Q5T5A4 169 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 ZFAND6Q6FIF0 208 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 FA2HQ7L5A8 372 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 FAM71E2Q8N5Q1 922 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 GPR26Q8NDV2 337 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 OR2A12Q8NGT7 310 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 OR10J6PQ8NGY7 276 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 RHOXF1Q8NHV9 184 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 REEP6Q96HR9 211 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 FCRL1Q96LA6 429 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 CCDC115Q96NT0 180 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 HIST1H4GQ99525 98 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 ZNF747Q9BV97 191 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 GNB1LQ9BYB4 327 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 UQCC1Q9NVA1 299 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 DOCK3Q8IZD9 2030 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 RGPD3A6NKT7 1758 aaPredicted RBP4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 RGPD4Q7Z3J3 1758 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 A0A0G2JN53 185 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 TEX48A0A1B0GUV7 120 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 hADV38S2A0JD32 116 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 PDCD5O14737 125 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 OR2A4O95047 310 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 CT45A10P0DMU9 189 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 IL1RNP18510 177 aa4.13□□□□□ -1.75
ECHDC1-222ENST00000531967 BTCP35070 178 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms