RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 DUSP18Q8NEJ0 188 aa13.58□□□□□ -0.24
PKP3-208ENST00000531857 RFESDQ8TAC1 157 aa13.58□□□□□ -0.24
PKP3-208ENST00000531857 ENKURQ8TC29 256 aa13.58□□□□□ -0.24
PKP3-208ENST00000531857 LGALS14Q8TCE9 139 aa13.58□□□□□ -0.24
PKP3-208ENST00000531857 THAP7Q9BT49 309 aaPredicted RBP13.58□□□□□ -0.24
PKP3-208ENST00000531857 LINC00574Q9H8X3 128 aa13.58□□□□□ -0.24
PKP3-208ENST00000531857 RHOFQ9HBH0 211 aa13.58□□□□□ -0.24
PKP3-208ENST00000531857 TMEM138Q9NPI0 162 aa13.58□□□□□ -0.24
PKP3-208ENST00000531857 TBC1D24Q9ULP9 559 aa13.58□□□□□ -0.24
PKP3-208ENST00000531857 hCG_2014768A0A024R1R8 64 aa13.57□□□□□ -0.24
PKP3-208ENST00000531857 TRAV39A0A0B4J263 110 aa13.57□□□□□ -0.24
PKP3-208ENST00000531857 TRAV24A0A0B4J272 114 aa13.57□□□□□ -0.24
PKP3-208ENST00000531857 NAP1L6A6NFF2 107 aa13.57□□□□□ -0.24
PKP3-208ENST00000531857 NPIPB11E5RHQ5 1161 aa13.57□□□□□ -0.24
PKP3-208ENST00000531857 TMEM225BP0DP42 221 aa13.57□□□□□ -0.24
PKP3-208ENST00000531857 SNRPBP14678 240 aaKnown RBP13.57□□□□□ -0.24
PKP3-208ENST00000531857 GPR12P47775 334 aa13.57□□□□□ -0.24
PKP3-208ENST00000531857 ZP1P60852 638 aa13.57□□□□□ -0.24
PKP3-208ENST00000531857 DYRK1AQ13627 763 aa13.57□□□□□ -0.24
PKP3-208ENST00000531857 PNLIPRP3Q17RR3 467 aa13.57□□□□□ -0.24
PKP3-208ENST00000531857 C1orf100Q5SVJ3 147 aa13.57□□□□□ -0.24
PKP3-208ENST00000531857 C9orf66Q5T8R8 295 aa13.57□□□□□ -0.24
PKP3-208ENST00000531857 OR5M8Q8NGP6 311 aa13.57□□□□□ -0.24
PKP3-208ENST00000531857 CPNE2Q96FN4 548 aaPredicted RBP13.57□□□□□ -0.24
PKP3-208ENST00000531857 IGHV3-72A0A0B4J1Y9 119 aa13.56□□□□□ -0.24
PKP3-208ENST00000531857 NCBP2LA6PVI3 153 aaKnown RBP13.56□□□□□ -0.24
PKP3-208ENST00000531857 SEC14L6B5MCN3 397 aa13.56□□□□□ -0.24
PKP3-208ENST00000531857 GABARAPH6UMI1 98 aa13.56□□□□□ -0.24
PKP3-208ENST00000531857 AP4M1O00189 453 aa13.56□□□□□ -0.24
PKP3-208ENST00000531857 MAS1P04201 325 aa13.56□□□□□ -0.24
PKP3-208ENST00000531857 TRAPPC2P0DI81 140 aa13.56□□□□□ -0.24
PKP3-208ENST00000531857 TRAPPC2BP0DI82 140 aa13.56□□□□□ -0.24
PKP3-208ENST00000531857 RAB3AP20336 220 aa13.56□□□□□ -0.24
PKP3-208ENST00000531857 RAB6AP20340 208 aa13.56□□□□□ -0.24
PKP3-208ENST00000531857 BDKRB2P30411 391 aa13.56□□□□□ -0.24
PKP3-208ENST00000531857 CDX1P47902 265 aaPredicted RBP13.56□□□□□ -0.24
PKP3-208ENST00000531857 REG1BP48304 166 aa13.56□□□□□ -0.24
PKP3-208ENST00000531857 EBI3Q14213 229 aa13.56□□□□□ -0.24
PKP3-208ENST00000531857 KIR2DS1Q14954 304 aa13.56□□□□□ -0.24
PKP3-208ENST00000531857 PAN3Q58A45 887 aaKnown RBP13.56□□□□□ -0.24
PKP3-208ENST00000531857 HES5Q5TA89 166 aa13.56□□□□□ -0.24
PKP3-208ENST00000531857 RAB12Q6IQ22 244 aa13.56□□□□□ -0.24
PKP3-208ENST00000531857 PLET1Q6UQ28 207 aa13.56□□□□□ -0.24
PKP3-208ENST00000531857 SNX29P2Q8IUI4 249 aa13.56□□□□□ -0.24
PKP3-208ENST00000531857 OR8U1Q8NH10 309 aa13.56□□□□□ -0.24
PKP3-208ENST00000531857 PLPPR1Q8TBJ4 325 aa13.56□□□□□ -0.24
PKP3-208ENST00000531857 MRGPRDQ8TDS7 321 aa13.56□□□□□ -0.24
PKP3-208ENST00000531857 SMIM4Q8WVI0 70 aa13.56□□□□□ -0.24
PKP3-208ENST00000531857 EAF1Q96JC9 268 aaPredicted RBP13.56□□□□□ -0.24
PKP3-208ENST00000531857 RHBDL2Q9NX52 303 aa13.56□□□□□ -0.24
PKP3-208ENST00000531857 TAS2R8Q9NYW2 309 aa13.56□□□□□ -0.24
PKP3-208ENST00000531857 SORL1Q92673 2214 aa13.56□□□□□ -0.24
PKP3-208ENST00000531857 TRAV8-7A0A075B6U6 113 aa13.55□□□□□ -0.24
PKP3-208ENST00000531857 IGHV1-3A0A0C4DH29 117 aa13.55□□□□□ -0.24
PKP3-208ENST00000531857 SULT1C2O00338 296 aa13.55□□□□□ -0.24
PKP3-208ENST00000531857 HSD17B6O14756 317 aa13.55□□□□□ -0.24
PKP3-208ENST00000531857 MAGEB3O15480 346 aa13.55□□□□□ -0.24
PKP3-208ENST00000531857 LYRM1O43325 122 aa13.55□□□□□ -0.24
PKP3-208ENST00000531857 XRCC3O43542 346 aa13.55□□□□□ -0.24
PKP3-208ENST00000531857 UBBP0CG47 229 aa13.55□□□□□ -0.24
PKP3-208ENST00000531857 HTR2CP28335 458 aa13.55□□□□□ -0.24
PKP3-208ENST00000531857 SSTR5P35346 364 aa13.55□□□□□ -0.24
PKP3-208ENST00000531857 P2RY14Q15391 338 aa13.55□□□□□ -0.24
PKP3-208ENST00000531857 KISS1Q15726 138 aa13.55□□□□□ -0.24
PKP3-208ENST00000531857 CXorf66Q5JRM2 361 aaPredicted RBP13.55□□□□□ -0.24
PKP3-208ENST00000531857 CASC10Q5T4H9 136 aa13.55□□□□□ -0.24
PKP3-208ENST00000531857 RSBN1Q5VWQ0 802 aaPredicted RBP13.55□□□□□ -0.24
PKP3-208ENST00000531857 ZNF57Q68EA5 555 aaPredicted RBP13.55□□□□□ -0.24
PKP3-208ENST00000531857 ZNF529Q6P280 563 aa13.55□□□□□ -0.24
PKP3-208ENST00000531857 MOB3BQ86TA1 216 aa13.55□□□□□ -0.24
PKP3-208ENST00000531857 TGIF2LXQ8IUE1 241 aa13.55□□□□□ -0.24
PKP3-208ENST00000531857 Q8N6K4 173 aa13.55□□□□□ -0.24
PKP3-208ENST00000531857 OR5H6Q8NGV6 325 aa13.55□□□□□ -0.24
PKP3-208ENST00000531857 OR10X1Q8NGY0 326 aa13.55□□□□□ -0.24
PKP3-208ENST00000531857 FAM3DQ96BQ1 224 aa13.55□□□□□ -0.24
PKP3-208ENST00000531857 RBMXL1Q96E39 390 aaKnown RBP13.55□□□□□ -0.24
PKP3-208ENST00000531857 GFI1Q99684 422 aa13.55□□□□□ -0.24
PKP3-208ENST00000531857 NCOR1P1Q9H4R4 102 aa13.55□□□□□ -0.24
PKP3-208ENST00000531857 ETAA1Q9NY74 926 aa13.55□□□□□ -0.24
PKP3-208ENST00000531857 GHRLQ9UBU3 117 aa13.55□□□□□ -0.24
PKP3-208ENST00000531857 FAM240BA0A1B0GVZ2 78 aa13.54□□□□□ -0.24
PKP3-208ENST00000531857 METTL21EPA6NDL7 271 aa13.54□□□□□ -0.24
PKP3-208ENST00000531857 HCKP08631 526 aa13.54□□□□□ -0.24
PKP3-208ENST00000531857 ZNF816Q0VGE8 651 aaPredicted RBP13.54□□□□□ -0.24
PKP3-208ENST00000531857 FOXE3Q13461 319 aa13.54□□□□□ -0.24
PKP3-208ENST00000531857 TMEM69Q5SWH9 247 aa13.54□□□□□ -0.24
PKP3-208ENST00000531857 NRARPQ7Z6K4 114 aa13.54□□□□□ -0.24
PKP3-208ENST00000531857 TOMM5Q8N4H5 51 aa13.54□□□□□ -0.24
PKP3-208ENST00000531857 RNF152Q8N8N0 203 aa13.54□□□□□ -0.24
PKP3-208ENST00000531857 Q8N9W7 124 aa13.54□□□□□ -0.24
PKP3-208ENST00000531857 MUC7Q8TAX7 377 aa13.54□□□□□ -0.24
PKP3-208ENST00000531857 FCAMRQ8WWV6 532 aa13.54□□□□□ -0.24
PKP3-208ENST00000531857 LIN7CQ9NUP9 197 aaKnown RBP13.54□□□□□ -0.24
PKP3-208ENST00000531857 ZNF581Q9P0T4 197 aa13.54□□□□□ -0.24
PKP3-208ENST00000531857 DYNC2H1Q8NCM8 4307 aaKnown RBP13.53□□□□□ -0.24
PKP3-208ENST00000531857 PLA2G10O15496 165 aa13.53□□□□□ -0.24
PKP3-208ENST00000531857 BPNT1O95861 308 aa13.53□□□□□ -0.24
PKP3-208ENST00000531857 GAPDHP04406 335 aaKnown RBP13.53□□□□□ -0.24
PKP3-208ENST00000531857 HNRNPCP07910 306 aaKnown RBP eCLIP13.53□□□□□ -0.24
PKP3-208ENST00000531857 CHATP28329 748 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms