RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 PRRT1Q99946 306 aa14.35□□□□□ -0.11
CTSB-222ENST00000531551 ODF3BA8MYP8 253 aa14.34□□□□□ -0.11
CTSB-222ENST00000531551 LYRM1O43325 122 aa14.34□□□□□ -0.11
CTSB-222ENST00000531551 HTR1DP28221 377 aa14.34□□□□□ -0.11
CTSB-222ENST00000531551 SRP14P37108 136 aaKnown RBP14.34□□□□□ -0.11
CTSB-222ENST00000531551 GPR12P47775 334 aa14.34□□□□□ -0.11
CTSB-222ENST00000531551 LINC00311Q8N616 119 aa14.34□□□□□ -0.11
CTSB-222ENST00000531551 DEDD2Q8WXF8 326 aa14.34□□□□□ -0.11
CTSB-222ENST00000531551 C22orf15Q8WYQ4 148 aa14.34□□□□□ -0.11
CTSB-222ENST00000531551 IFI27L2Q9H2X8 130 aa14.34□□□□□ -0.11
CTSB-222ENST00000531551 ZNF221Q9UK13 617 aa14.34□□□□□ -0.11
CTSB-222ENST00000531551 TBC1D24Q9ULP9 559 aa14.34□□□□□ -0.11
CTSB-222ENST00000531551 AMMECR1Q9Y4X0 333 aaPredicted RBP14.34□□□□□ -0.11
CTSB-222ENST00000531551 NAP1L6A6NFF2 107 aa14.33□□□□□ -0.11
CTSB-222ENST00000531551 BUB1B-PAK6H3BSN5 160 aa14.33□□□□□ -0.11
CTSB-222ENST00000531551 HSD17B6O14756 317 aa14.33□□□□□ -0.11
CTSB-222ENST00000531551 SAA4P35542 130 aa14.33□□□□□ -0.11
CTSB-222ENST00000531551 AADACL3Q5VUY0 350 aa14.33□□□□□ -0.11
CTSB-222ENST00000531551 LDLRAD3Q86YD5 345 aa14.33□□□□□ -0.11
CTSB-222ENST00000531551 PIP4P2Q8N4L2 257 aa14.33□□□□□ -0.11
CTSB-222ENST00000531551 C8orf31Q8N9H6 132 aa14.33□□□□□ -0.11
CTSB-222ENST00000531551 TERB2Q8NHR7 220 aa14.33□□□□□ -0.11
CTSB-222ENST00000531551 MOB3AQ96BX8 217 aa14.33□□□□□ -0.11
CTSB-222ENST00000531551 C7orf50Q9BRJ6 194 aaKnown RBP14.33□□□□□ -0.11
CTSB-222ENST00000531551 AGMATQ9BSE5 352 aa14.33□□□□□ -0.11
CTSB-222ENST00000531551 SLC5A7Q9GZV3 580 aa14.33□□□□□ -0.11
CTSB-222ENST00000531551 MS4A7Q9GZW8 240 aaPredicted RBP14.33□□□□□ -0.11
CTSB-222ENST00000531551 FXYD6Q9H0Q3 95 aa14.33□□□□□ -0.11
CTSB-222ENST00000531551 NUP50Q9UKX7 468 aa14.33□□□□□ -0.11
CTSB-222ENST00000531551 ITGB1BP1O14713 200 aa14.33□□□□□ -0.12
CTSB-222ENST00000531551 PGAM2P15259 253 aa14.33□□□□□ -0.12
CTSB-222ENST00000531551 HNF1AP20823 631 aa14.33□□□□□ -0.12
CTSB-222ENST00000531551 EPHA1P21709 976 aa14.33□□□□□ -0.12
CTSB-222ENST00000531551 PAX6P26367 422 aa14.33□□□□□ -0.12
CTSB-222ENST00000531551 IL3RAP26951 378 aa14.33□□□□□ -0.12
CTSB-222ENST00000531551 CCR6P51684 374 aa14.33□□□□□ -0.12
CTSB-222ENST00000531551 BAMBIQ13145 260 aa14.33□□□□□ -0.12
CTSB-222ENST00000531551 TEX29Q8N6K0 151 aa14.33□□□□□ -0.12
CTSB-222ENST00000531551 CCL28Q9NRJ3 127 aa14.33□□□□□ -0.12
CTSB-222ENST00000531551 PIPOXQ9P0Z9 390 aa14.33□□□□□ -0.12
CTSB-222ENST00000531551 HILPDAQ9Y5L2 63 aa14.33□□□□□ -0.12
CTSB-222ENST00000531551 SOX21Q9Y651 276 aaPredicted RBP14.33□□□□□ -0.12
CTSB-222ENST00000531551 HIVEP1P15822 2718 aa14.32□□□□□ -0.12
CTSB-222ENST00000531551 SAA2-SAA4A0A096LPE2 208 aa14.32□□□□□ -0.12
CTSB-222ENST00000531551 RAB29O14966 203 aa14.32□□□□□ -0.12
CTSB-222ENST00000531551 SAA2P0DJI9 122 aaPredicted RBP14.32□□□□□ -0.12
CTSB-222ENST00000531551 REG1BP48304 166 aa14.32□□□□□ -0.12
CTSB-222ENST00000531551 DEFA1P59665 94 aa14.32□□□□□ -0.12
CTSB-222ENST00000531551 DEFA3P59666 94 aa14.32□□□□□ -0.12
CTSB-222ENST00000531551 RPL39P5Q59GN2 51 aa14.32□□□□□ -0.12
CTSB-222ENST00000531551 LHFPL1Q86WI0 220 aa14.32□□□□□ -0.12
CTSB-222ENST00000531551 POC5Q8NA72 575 aa14.32□□□□□ -0.12
CTSB-222ENST00000531551 C17orf50Q8WW18 174 aa14.32□□□□□ -0.12
CTSB-222ENST00000531551 DPM3Q9P2X0 92 aa14.32□□□□□ -0.12
CTSB-222ENST00000531551 LEUTXA8MZ59 168 aa14.31□□□□□ -0.12
CTSB-222ENST00000531551 DCTN2Q13561 401 aaKnown RBP14.31□□□□□ -0.12
CTSB-222ENST00000531551 DIAPH2-AS1Q14236 149 aa14.31□□□□□ -0.12
CTSB-222ENST00000531551 SSX2Q16385 188 aa14.31□□□□□ -0.12
CTSB-222ENST00000531551 MIDNQ504T8 468 aa14.31□□□□□ -0.12
CTSB-222ENST00000531551 LDLRAD2Q5SZI1 272 aa14.31□□□□□ -0.12
CTSB-222ENST00000531551 MZT2BQ6NZ67 158 aa14.31□□□□□ -0.12
CTSB-222ENST00000531551 ODF3L1Q8IXM7 274 aa14.31□□□□□ -0.12
CTSB-222ENST00000531551 OR13C8Q8NGS7 320 aa14.31□□□□□ -0.12
CTSB-222ENST00000531551 MARCH1Q8TCQ1 289 aa14.31□□□□□ -0.12
CTSB-222ENST00000531551 RPEQ96AT9 228 aa14.31□□□□□ -0.12
CTSB-222ENST00000531551 SLC2A8Q9NY64 477 aa14.31□□□□□ -0.12
CTSB-222ENST00000531551 TBL2Q9Y4P3 447 aaKnown RBP14.31□□□□□ -0.12
CTSB-222ENST00000531551 CEACAM3P40198 252 aa14.31□□□□□ -0.12
CTSB-222ENST00000531551 ASAH1Q13510 395 aa14.31□□□□□ -0.12
CTSB-222ENST00000531551 PLA1AQ53H76 456 aa14.31□□□□□ -0.12
CTSB-222ENST00000531551 ZNF645Q8N7E2 425 aa14.31□□□□□ -0.12
CTSB-222ENST00000531551 S1PR3Q99500 378 aa14.31□□□□□ -0.12
CTSB-222ENST00000531551 BEX2Q9BXY8 128 aa14.31□□□□□ -0.12
CTSB-222ENST00000531551 SDHAF2Q9NX18 166 aa14.31□□□□□ -0.12
CTSB-222ENST00000531551 FAM96BQ9Y3D0 163 aa14.31□□□□□ -0.12
CTSB-222ENST00000531551 A0A0U1RQK1 487 aa14.3□□□□□ -0.12
CTSB-222ENST00000531551 TNFSF12O43508 249 aa14.3□□□□□ -0.12
CTSB-222ENST00000531551 FSHBP01225 129 aa14.3□□□□□ -0.12
CTSB-222ENST00000531551 PI3P19957 117 aa14.3□□□□□ -0.12
CTSB-222ENST00000531551 MINOS1Q5TGZ0 78 aa14.3□□□□□ -0.12
CTSB-222ENST00000531551 ZNF818PQ6ZRF7 136 aa14.3□□□□□ -0.12
CTSB-222ENST00000531551 BCL6BQ8N143 479 aaPredicted RBP14.3□□□□□ -0.12
CTSB-222ENST00000531551 MRGPRFQ96AM1 343 aa14.3□□□□□ -0.12
CTSB-222ENST00000531551 GHITMQ9H3K2 345 aa14.3□□□□□ -0.12
CTSB-222ENST00000531551 MINOS1-NBL1R4GNA1 71 aa14.3□□□□□ -0.12
CTSB-222ENST00000531551 TLN2Q9Y4G6 2542 aa14.29□□□□□ -0.12
CTSB-222ENST00000531551 FAM240BA0A1B0GVZ2 78 aa14.29□□□□□ -0.12
CTSB-222ENST00000531551 INAFM1C9JVW0 142 aa14.29□□□□□ -0.12
CTSB-222ENST00000531551 GNRHRP30968 328 aa14.29□□□□□ -0.12
CTSB-222ENST00000531551 BTCP35070 178 aa14.29□□□□□ -0.12
CTSB-222ENST00000531551 TPTE2P1Q5T6R2 138 aa14.29□□□□□ -0.12
CTSB-222ENST00000531551 TGIF2LXQ8IUE1 241 aa14.29□□□□□ -0.12
CTSB-222ENST00000531551 DRAM1Q8N682 238 aa14.29□□□□□ -0.12
CTSB-222ENST00000531551 DRAXINQ8NBI3 349 aaPredicted RBP14.29□□□□□ -0.12
CTSB-222ENST00000531551 M0R1X1 148 aa14.29□□□□□ -0.12
CTSB-222ENST00000531551 BPIFB3P59826 476 aa14.29□□□□□ -0.12
CTSB-222ENST00000531551 PHLDA2Q53GA4 152 aa14.29□□□□□ -0.12
CTSB-222ENST00000531551 LPCAT3Q6P1A2 487 aa14.29□□□□□ -0.12
CTSB-222ENST00000531551 SLC38A6Q8IZM9 456 aa14.29□□□□□ -0.12
CTSB-222ENST00000531551 ENKURQ8TC29 256 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms