RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 OR10G4Q8NGN3 311 aa14.44□□□□□ -0.1
BRCA2-204ENST00000530893 HSPB7Q9UBY9 170 aa14.44□□□□□ -0.1
BRCA2-204ENST00000530893 C1orf196B1AJZ1 125 aa14.43□□□□□ -0.1
BRCA2-204ENST00000530893 SCAF4O95104 1147 aaKnown RBP14.43□□□□□ -0.1
BRCA2-204ENST00000530893 SRP19P09132 144 aaKnown RBP14.43□□□□□ -0.1
BRCA2-204ENST00000530893 METTL15P1P0C7V9 234 aa14.43□□□□□ -0.1
BRCA2-204ENST00000530893 P0C879 139 aa14.43□□□□□ -0.1
BRCA2-204ENST00000530893 IAPPP10997 89 aa14.43□□□□□ -0.1
BRCA2-204ENST00000530893 TNFRSF9Q07011 255 aa14.43□□□□□ -0.1
BRCA2-204ENST00000530893 KRBOX4Q5JUW0 171 aa14.43□□□□□ -0.1
BRCA2-204ENST00000530893 PRAMEF6Q5VXH4 476 aa14.43□□□□□ -0.1
BRCA2-204ENST00000530893 ZNF66Q6ZN08 573 aa14.43□□□□□ -0.1
BRCA2-204ENST00000530893 FAM90A1Q86YD7 464 aa14.43□□□□□ -0.1
BRCA2-204ENST00000530893 CLDND2Q8NHS1 167 aa14.43□□□□□ -0.1
BRCA2-204ENST00000530893 PTBP3O95758 552 aaKnown RBP14.42□□□□□ -0.1
BRCA2-204ENST00000530893 AKR1C3P42330 323 aa14.42□□□□□ -0.1
BRCA2-204ENST00000530893 HTD2P86397 168 aa14.42□□□□□ -0.1
BRCA2-204ENST00000530893 EIF2S3LQ2VIR3 472 aaKnown RBP14.42□□□□□ -0.1
BRCA2-204ENST00000530893 LILRB2Q8N423 598 aa14.42□□□□□ -0.1
BRCA2-204ENST00000530893 ZNF561Q8N587 486 aa14.42□□□□□ -0.1
BRCA2-204ENST00000530893 OR52L2PQ8NGH6 319 aa14.42□□□□□ -0.1
BRCA2-204ENST00000530893 PINX1Q96BK5 328 aaKnown RBP14.42□□□□□ -0.1
BRCA2-204ENST00000530893 IFNA4P05014 189 aa14.42□□□□□ -0.1
BRCA2-204ENST00000530893 ADH4P08319 380 aa14.42□□□□□ -0.1
BRCA2-204ENST00000530893 COL10A1Q03692 680 aa14.42□□□□□ -0.1
BRCA2-204ENST00000530893 ICAM4Q14773 271 aa14.42□□□□□ -0.1
BRCA2-204ENST00000530893 IGFL3Q6UXB1 125 aa14.42□□□□□ -0.1
BRCA2-204ENST00000530893 TMEM14EPQ6UXP3 125 aa14.42□□□□□ -0.1
BRCA2-204ENST00000530893 MBD3L1Q8WWY6 194 aa14.42□□□□□ -0.1
BRCA2-204ENST00000530893 TAAR6Q96RI8 345 aa14.42□□□□□ -0.1
BRCA2-204ENST00000530893 C20orf24Q9BUV8 137 aa14.42□□□□□ -0.1
BRCA2-204ENST00000530893 MSL2Q9HCI7 577 aa14.42□□□□□ -0.1
BRCA2-204ENST00000530893 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.42□□□□□ -0.1
BRCA2-204ENST00000530893 SLC25A15Q9Y619 301 aa14.42□□□□□ -0.1
BRCA2-204ENST00000530893 KIAA2026Q5HYC2 2103 aa14.42□□□□□ -0.1
BRCA2-204ENST00000530893 MAS1LP35410 378 aa14.41□□□□□ -0.1
BRCA2-204ENST00000530893 ARL16Q0P5N6 197 aa14.41□□□□□ -0.1
BRCA2-204ENST00000530893 HAGHQ16775 308 aa14.41□□□□□ -0.1
BRCA2-204ENST00000530893 SPANXN5Q5MJ07 72 aa14.41□□□□□ -0.1
BRCA2-204ENST00000530893 MRGPRDQ8TDS7 321 aa14.41□□□□□ -0.1
BRCA2-204ENST00000530893 HSD17B10Q99714 261 aaKnown RBP14.41□□□□□ -0.1
BRCA2-204ENST00000530893 WDR61Q9GZS3 305 aaKnown RBP14.41□□□□□ -0.1
BRCA2-204ENST00000530893 OPN3Q9H1Y3 402 aaPredicted RBP14.41□□□□□ -0.1
BRCA2-204ENST00000530893 UFSP2Q9NUQ7 469 aa14.41□□□□□ -0.1
BRCA2-204ENST00000530893 URB1O60287 2271 aaKnown RBP14.41□□□□□ -0.1
BRCA2-204ENST00000530893 CACNA1HO95180 2353 aa14.41□□□□□ -0.1
BRCA2-204ENST00000530893 LRRC30A6NM36 301 aa14.41□□□□□ -0.1
BRCA2-204ENST00000530893 SPINT2O43291 252 aa14.41□□□□□ -0.1
BRCA2-204ENST00000530893 RAMP3O60896 148 aa14.41□□□□□ -0.1
BRCA2-204ENST00000530893 CLDN14O95500 239 aa14.41□□□□□ -0.1
BRCA2-204ENST00000530893 CFHR2P36980 270 aa14.41□□□□□ -0.1
BRCA2-204ENST00000530893 HABP2Q14520 560 aaPredicted RBP14.41□□□□□ -0.1
BRCA2-204ENST00000530893 ATP6V1FQ16864 119 aa14.41□□□□□ -0.1
BRCA2-204ENST00000530893 C3orf36Q3SXR2 165 aa14.41□□□□□ -0.1
BRCA2-204ENST00000530893 HAPLN4Q86UW8 402 aa14.41□□□□□ -0.1
BRCA2-204ENST00000530893 MALSU1Q96EH3 234 aa14.41□□□□□ -0.1
BRCA2-204ENST00000530893 RPRMQ9NS64 109 aa14.41□□□□□ -0.1
BRCA2-204ENST00000530893 TIMM9Q9Y5J7 89 aa14.41□□□□□ -0.1
BRCA2-204ENST00000530893 PUS1Q9Y606 427 aaKnown RBP eCLIP14.41□□□□□ -0.1
BRCA2-204ENST00000530893 OTOGLQ3ZCN5 2332 aa14.41□□□□□ -0.1
BRCA2-204ENST00000530893 A0A087WWC5 75 aa14.4□□□□□ -0.1
BRCA2-204ENST00000530893 RAB29O14966 203 aa14.4□□□□□ -0.1
BRCA2-204ENST00000530893 AGAP20933 346 aa14.4□□□□□ -0.1
BRCA2-204ENST00000530893 RPL30P62888 115 aaKnown RBP14.4□□□□□ -0.1
BRCA2-204ENST00000530893 LRRC29Q8WV35 223 aa14.4□□□□□ -0.1
BRCA2-204ENST00000530893 TCTEX1D2Q8WW35 142 aa14.4□□□□□ -0.1
BRCA2-204ENST00000530893 EDARADDQ8WWZ3 215 aa14.4□□□□□ -0.1
BRCA2-204ENST00000530893 C5orf30Q96GV9 206 aa14.4□□□□□ -0.1
BRCA2-204ENST00000530893 CIB3Q96Q77 187 aaPredicted RBP14.4□□□□□ -0.1
BRCA2-204ENST00000530893 RSG1Q9BU20 258 aa14.4□□□□□ -0.1
BRCA2-204ENST00000530893 RBKSQ9H477 322 aa14.4□□□□□ -0.1
BRCA2-204ENST00000530893 WASF3Q9UPY6 502 aa14.4□□□□□ -0.1
BRCA2-204ENST00000530893 H3BQ15 152 aa14.39□□□□□ -0.11
BRCA2-204ENST00000530893 CLDN1O95832 211 aa14.39□□□□□ -0.11
BRCA2-204ENST00000530893 KRASP01116 189 aa14.39□□□□□ -0.11
BRCA2-204ENST00000530893 RAB5AP20339 215 aa14.39□□□□□ -0.11
BRCA2-204ENST00000530893 GLIPR1P48060 266 aa14.39□□□□□ -0.11
BRCA2-204ENST00000530893 PPP1R35Q8TAP8 253 aa14.39□□□□□ -0.11
BRCA2-204ENST00000530893 FZR1Q9UM11 496 aa14.39□□□□□ -0.11
BRCA2-204ENST00000530893 PTPRBP23467 1997 aa14.39□□□□□ -0.11
BRCA2-204ENST00000530893 LOC102723971A0A1B0GUV8 181 aa14.39□□□□□ -0.11
BRCA2-204ENST00000530893 SRRM5B3KS81 715 aa14.39□□□□□ -0.11
BRCA2-204ENST00000530893 GZMHP20718 246 aa14.39□□□□□ -0.11
BRCA2-204ENST00000530893 PRDX2P32119 198 aa14.39□□□□□ -0.11
BRCA2-204ENST00000530893 SLC38A11Q08AI6 406 aa14.39□□□□□ -0.11
BRCA2-204ENST00000530893 PMS2P11Q13670 270 aa14.39□□□□□ -0.11
BRCA2-204ENST00000530893 TMEM41BQ5BJD5 291 aa14.39□□□□□ -0.11
BRCA2-204ENST00000530893 TIMM23BQ5SRD1 257 aa14.39□□□□□ -0.11
BRCA2-204ENST00000530893 SEM1Q6ZVN7 128 aa14.39□□□□□ -0.11
BRCA2-204ENST00000530893 CENPVQ7Z7K6 275 aaPredicted RBP14.39□□□□□ -0.11
BRCA2-204ENST00000530893 ZNF808Q8N4W9 903 aaPredicted RBP14.39□□□□□ -0.11
BRCA2-204ENST00000530893 OR13A1Q8NGR1 328 aa14.39□□□□□ -0.11
BRCA2-204ENST00000530893 C2CD4CQ8TF44 421 aa14.39□□□□□ -0.11
BRCA2-204ENST00000530893 TAF15Q92804 592 aaKnown RBP eCLIP14.39□□□□□ -0.11
BRCA2-204ENST00000530893 ISOC2Q96AB3 205 aa14.39□□□□□ -0.11
BRCA2-204ENST00000530893 NIPSNAP3BQ9BS92 247 aa14.39□□□□□ -0.11
BRCA2-204ENST00000530893 CISD1Q9NZ45 108 aaKnown RBP14.39□□□□□ -0.11
BRCA2-204ENST00000530893 GTF3C1Q12789 2109 aa14.39□□□□□ -0.11
BRCA2-204ENST00000530893 A0A1W2PPH5 198 aa14.38□□□□□ -0.11
BRCA2-204ENST00000530893 ODAMA1E959 279 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms