RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 TAS2R46P59540 309 aa12.93□□□□□ -0.34
BRK1-201ENST00000530758 ACTBP60709 375 aa12.93□□□□□ -0.34
BRK1-201ENST00000530758 ACTG1P63261 375 aa12.93□□□□□ -0.34
BRK1-201ENST00000530758 DGCR2P98153 550 aa12.93□□□□□ -0.34
BRK1-201ENST00000530758 CDK10Q15131 360 aa12.93□□□□□ -0.34
BRK1-201ENST00000530758 FAM131AQ6UXB0 335 aa12.93□□□□□ -0.34
BRK1-201ENST00000530758 ZNF833PQ6ZTB9 187 aa12.93□□□□□ -0.34
BRK1-201ENST00000530758 OR8H3Q8N146 312 aa12.93□□□□□ -0.34
BRK1-201ENST00000530758 GIMAP1Q8WWP7 306 aa12.93□□□□□ -0.34
BRK1-201ENST00000530758 SSX3Q99909 188 aa12.93□□□□□ -0.34
BRK1-201ENST00000530758 ZNF251Q9BRH9 671 aa12.93□□□□□ -0.34
BRK1-201ENST00000530758 GINS4Q9BRT9 223 aa12.93□□□□□ -0.34
BRK1-201ENST00000530758 DPAGT1Q9H3H5 408 aa12.93□□□□□ -0.34
BRK1-201ENST00000530758 ESM1Q9NQ30 184 aa12.93□□□□□ -0.34
BRK1-201ENST00000530758 PTTG2Q9NZH5 202 aa12.93□□□□□ -0.34
BRK1-201ENST00000530758 OR2W1Q9Y3N9 320 aa12.93□□□□□ -0.34
BRK1-201ENST00000530758 HILPDAQ9Y5L2 63 aa12.93□□□□□ -0.34
BRK1-201ENST00000530758 STAB1Q9NY15 2570 aa12.93□□□□□ -0.34
BRK1-201ENST00000530758 FAM90A9PA6NNJ1 464 aa12.92□□□□□ -0.34
BRK1-201ENST00000530758 RAB29O14966 203 aa12.92□□□□□ -0.34
BRK1-201ENST00000530758 HOXA3O43365 443 aaPredicted RBP12.92□□□□□ -0.34
BRK1-201ENST00000530758 TXNL1O43396 289 aa12.92□□□□□ -0.34
BRK1-201ENST00000530758 PROP1O75360 226 aa12.92□□□□□ -0.34
BRK1-201ENST00000530758 VENTXO95231 258 aa12.92□□□□□ -0.34
BRK1-201ENST00000530758 ARPC4P59998 168 aa12.92□□□□□ -0.34
BRK1-201ENST00000530758 BAMBIQ13145 260 aa12.92□□□□□ -0.34
BRK1-201ENST00000530758 DYRK1AQ13627 763 aa12.92□□□□□ -0.34
BRK1-201ENST00000530758 DIAPH2-AS1Q14236 149 aa12.92□□□□□ -0.34
BRK1-201ENST00000530758 SLC9A3R2Q15599 337 aa12.92□□□□□ -0.34
BRK1-201ENST00000530758 ZNF79Q15937 498 aa12.92□□□□□ -0.34
BRK1-201ENST00000530758 LRRC75BQ2VPJ9 315 aa12.92□□□□□ -0.34
BRK1-201ENST00000530758 SPANXN2Q5MJ10 180 aa12.92□□□□□ -0.34
BRK1-201ENST00000530758 ZNF660Q6AZW8 331 aaPredicted RBP12.92□□□□□ -0.34
BRK1-201ENST00000530758 THNSL2Q86YJ6 484 aa12.92□□□□□ -0.34
BRK1-201ENST00000530758 LYG1Q8N1E2 194 aa12.92□□□□□ -0.34
BRK1-201ENST00000530758 OR5R1Q8NH85 324 aa12.92□□□□□ -0.34
BRK1-201ENST00000530758 RTN4IP1Q8WWV3 396 aaPredicted RBP12.92□□□□□ -0.34
BRK1-201ENST00000530758 RPEQ96AT9 228 aa12.92□□□□□ -0.34
BRK1-201ENST00000530758 A0A1W2PPI3 338 aa12.91□□□□□ -0.34
BRK1-201ENST00000530758 HSD17B6O14756 317 aa12.91□□□□□ -0.34
BRK1-201ENST00000530758 ST8SIA5O15466 376 aa12.91□□□□□ -0.34
BRK1-201ENST00000530758 OR5H8P0DN80 308 aa12.91□□□□□ -0.34
BRK1-201ENST00000530758 TBPP20226 339 aa12.91□□□□□ -0.34
BRK1-201ENST00000530758 PAX6P26367 422 aa12.91□□□□□ -0.34
BRK1-201ENST00000530758 ACTBL2Q562R1 376 aa12.91□□□□□ -0.34
BRK1-201ENST00000530758 VAX1Q5SQQ9 334 aa12.91□□□□□ -0.34
BRK1-201ENST00000530758 TMEM229BQ8NBD8 167 aa12.91□□□□□ -0.34
BRK1-201ENST00000530758 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.91□□□□□ -0.34
BRK1-201ENST00000530758 ZFAND2BQ8WV99 257 aa12.91□□□□□ -0.34
BRK1-201ENST00000530758 CFHR4Q92496 578 aa12.91□□□□□ -0.34
BRK1-201ENST00000530758 TOMM40LQ969M1 308 aa12.91□□□□□ -0.34
BRK1-201ENST00000530758 SAA2-SAA4A0A096LPE2 208 aa12.9□□□□□ -0.34
BRK1-201ENST00000530758 IGHV1-3A0A0C4DH29 117 aa12.9□□□□□ -0.34
BRK1-201ENST00000530758 DNAJC9-AS1A6NH13 148 aa12.9□□□□□ -0.34
BRK1-201ENST00000530758 IGHV4-59P01825 116 aa12.9□□□□□ -0.34
BRK1-201ENST00000530758 CD74P04233 296 aa12.9□□□□□ -0.34
BRK1-201ENST00000530758 RNASE1P07998 156 aaKnown RBP12.9□□□□□ -0.34
BRK1-201ENST00000530758 OR8U9P0C7N5 309 aa12.9□□□□□ -0.34
BRK1-201ENST00000530758 SAA2P0DJI9 122 aaPredicted RBP12.9□□□□□ -0.34
BRK1-201ENST00000530758 NFYAP23511 347 aaPredicted RBP12.9□□□□□ -0.34
BRK1-201ENST00000530758 HLA-DMAP28067 261 aa12.9□□□□□ -0.34
BRK1-201ENST00000530758 BRS3P32247 399 aa12.9□□□□□ -0.34
BRK1-201ENST00000530758 OR3A3P47888 321 aa12.9□□□□□ -0.34
BRK1-201ENST00000530758 RFX2P48378 723 aa12.9□□□□□ -0.34
BRK1-201ENST00000530758 ARHGDIBP52566 201 aa12.9□□□□□ -0.34
BRK1-201ENST00000530758 ZNF45Q02386 682 aa12.9□□□□□ -0.34
BRK1-201ENST00000530758 EBI3Q14213 229 aa12.9□□□□□ -0.34
BRK1-201ENST00000530758 OR5H2Q8NGV7 314 aa12.9□□□□□ -0.34
BRK1-201ENST00000530758 OR8U1Q8NH10 309 aa12.9□□□□□ -0.34
BRK1-201ENST00000530758 ABHD14BQ96IU4 210 aa12.9□□□□□ -0.34
BRK1-201ENST00000530758 S1PR3Q99500 378 aa12.9□□□□□ -0.34
BRK1-201ENST00000530758 TAS2R8Q9NYW2 309 aa12.9□□□□□ -0.34
BRK1-201ENST00000530758 ZNF736B4DX44 427 aaPredicted RBP12.89□□□□□ -0.35
BRK1-201ENST00000530758 H3BUX3 64 aa12.89□□□□□ -0.35
BRK1-201ENST00000530758 SLC22A5O76082 557 aa12.89□□□□□ -0.35
BRK1-201ENST00000530758 PMP2P02689 132 aa12.89□□□□□ -0.35
BRK1-201ENST00000530758 FCER2P06734 321 aa12.89□□□□□ -0.35
BRK1-201ENST00000530758 FCGR2CP31995 323 aa12.89□□□□□ -0.35
BRK1-201ENST00000530758 HRH1P35367 487 aa12.89□□□□□ -0.35
BRK1-201ENST00000530758 LUMP51884 338 aaPredicted RBP12.89□□□□□ -0.35
BRK1-201ENST00000530758 TAS2R19P59542 299 aa12.89□□□□□ -0.35
BRK1-201ENST00000530758 UBA52P62987 128 aaKnown RBP12.89□□□□□ -0.35
BRK1-201ENST00000530758 SRSF2Q01130 221 aaKnown RBP12.89□□□□□ -0.35
BRK1-201ENST00000530758 MSMO1Q15800 293 aa12.89□□□□□ -0.35
BRK1-201ENST00000530758 TGIF2LXQ8IUE1 241 aa12.89□□□□□ -0.35
BRK1-201ENST00000530758 THAP7Q9BT49 309 aaPredicted RBP12.89□□□□□ -0.35
BRK1-201ENST00000530758 SRRQ9GZT4 340 aa12.89□□□□□ -0.35
BRK1-201ENST00000530758 EHFQ9NZC4 300 aa12.89□□□□□ -0.35
BRK1-201ENST00000530758 ZNF221Q9UK13 617 aa12.89□□□□□ -0.35
BRK1-201ENST00000530758 VPREB3Q9UKI3 123 aa12.89□□□□□ -0.35
BRK1-201ENST00000530758 PPYP01298 95 aa12.88□□□□□ -0.35
BRK1-201ENST00000530758 CSF1P09603 554 aa12.88□□□□□ -0.35
BRK1-201ENST00000530758 CD1BP29016 333 aa12.88□□□□□ -0.35
BRK1-201ENST00000530758 RAB13P51153 203 aa12.88□□□□□ -0.35
BRK1-201ENST00000530758 RPL15P61313 204 aaKnown RBP12.88□□□□□ -0.35
BRK1-201ENST00000530758 C16orf87Q6PH81 154 aa12.88□□□□□ -0.35
BRK1-201ENST00000530758 LIAT1Q6ZQX7 453 aa12.88□□□□□ -0.35
BRK1-201ENST00000530758 Q8N402 240 aa12.88□□□□□ -0.35
BRK1-201ENST00000530758 GDPD1Q8N9F7 314 aa12.88□□□□□ -0.35
BRK1-201ENST00000530758 OR6F1Q8NGZ6 308 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms