RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 SH2D7A6NKC9 451 aaPredicted RBP12.82□□□□□ -0.36
TSPAN4-218ENST00000529566 M0QZK8 103 aa12.82□□□□□ -0.36
TSPAN4-218ENST00000529566 SSX5O60225 188 aa12.82□□□□□ -0.36
TSPAN4-218ENST00000529566 DIRAS3O95661 229 aa12.82□□□□□ -0.36
TSPAN4-218ENST00000529566 SAA2P0DJI9 122 aaPredicted RBP12.82□□□□□ -0.36
TSPAN4-218ENST00000529566 DTYMKP23919 212 aa12.82□□□□□ -0.36
TSPAN4-218ENST00000529566 MRPS15P82914 257 aaKnown RBP12.82□□□□□ -0.36
TSPAN4-218ENST00000529566 ARFRP1Q13795 201 aa12.82□□□□□ -0.36
TSPAN4-218ENST00000529566 HES1Q14469 280 aa12.82□□□□□ -0.36
TSPAN4-218ENST00000529566 TMEM95Q3KNT9 176 aa12.82□□□□□ -0.36
TSPAN4-218ENST00000529566 ABCA11PQ4W5N1 156 aa12.82□□□□□ -0.36
TSPAN4-218ENST00000529566 PRR31Q5SQ13 230 aa12.82□□□□□ -0.36
TSPAN4-218ENST00000529566 C5orf56Q8N8D9 126 aa12.82□□□□□ -0.36
TSPAN4-218ENST00000529566 MRPL20Q9BYC9 149 aaKnown RBP12.82□□□□□ -0.36
TSPAN4-218ENST00000529566 MOB4Q9Y3A3 225 aa12.82□□□□□ -0.36
TSPAN4-218ENST00000529566 TRBV6-7A0A0A0MS04 114 aa12.81□□□□□ -0.36
TSPAN4-218ENST00000529566 A0A0A6YYH2 397 aa12.81□□□□□ -0.36
TSPAN4-218ENST00000529566 A6NJ64 397 aa12.81□□□□□ -0.36
TSPAN4-218ENST00000529566 PROP1O75360 226 aa12.81□□□□□ -0.36
TSPAN4-218ENST00000529566 GABARAPO95166 117 aa12.81□□□□□ -0.36
TSPAN4-218ENST00000529566 LSAMPQ13449 338 aa12.81□□□□□ -0.36
TSPAN4-218ENST00000529566 KIR2DS1Q14954 304 aa12.81□□□□□ -0.36
TSPAN4-218ENST00000529566 PNLIPRP3Q17RR3 467 aa12.81□□□□□ -0.36
TSPAN4-218ENST00000529566 OR2T10Q8NGZ9 312 aa12.81□□□□□ -0.36
TSPAN4-218ENST00000529566 NABP2Q9BQ15 211 aa12.81□□□□□ -0.36
TSPAN4-218ENST00000529566 ABCG5Q9H222 651 aa12.81□□□□□ -0.36
TSPAN4-218ENST00000529566 RDH8Q9NYR8 311 aa12.81□□□□□ -0.36
TSPAN4-218ENST00000529566 RAB29O14966 203 aa12.8□□□□□ -0.36
TSPAN4-218ENST00000529566 HSPA12AO43301 675 aa12.8□□□□□ -0.36
TSPAN4-218ENST00000529566 FGF16O43320 207 aa12.8□□□□□ -0.36
TSPAN4-218ENST00000529566 MOSP00540 346 aa12.8□□□□□ -0.36
TSPAN4-218ENST00000529566 LPLP06858 475 aa12.8□□□□□ -0.36
TSPAN4-218ENST00000529566 CT45A6P0DMU7 189 aa12.8□□□□□ -0.36
TSPAN4-218ENST00000529566 CT45A5P0DMU8 189 aa12.8□□□□□ -0.36
TSPAN4-218ENST00000529566 CT45A7P0DMV0 189 aa12.8□□□□□ -0.36
TSPAN4-218ENST00000529566 VSIG10L2P0DP72 767 aa12.8□□□□□ -0.36
TSPAN4-218ENST00000529566 TALDO1P37837 337 aa12.8□□□□□ -0.36
TSPAN4-218ENST00000529566 SERPINB10P48595 397 aa12.8□□□□□ -0.36
TSPAN4-218ENST00000529566 RPL39P5Q59GN2 51 aa12.8□□□□□ -0.36
TSPAN4-218ENST00000529566 FAM71F2Q6NXP2 309 aa12.8□□□□□ -0.36
TSPAN4-218ENST00000529566 NUDCD2Q8WVJ2 157 aa12.8□□□□□ -0.36
TSPAN4-218ENST00000529566 ABHD14BQ96IU4 210 aa12.8□□□□□ -0.36
TSPAN4-218ENST00000529566 RITA1Q96K30 269 aa12.8□□□□□ -0.36
TSPAN4-218ENST00000529566 DCSTAMPQ9H295 470 aa12.8□□□□□ -0.36
TSPAN4-218ENST00000529566 GHITMQ9H3K2 345 aa12.8□□□□□ -0.36
TSPAN4-218ENST00000529566 PIPOXQ9P0Z9 390 aa12.8□□□□□ -0.36
TSPAN4-218ENST00000529566 VWFP04275 2813 aa12.8□□□□□ -0.36
TSPAN4-218ENST00000529566 MGAM2Q2M2H8 2515 aa12.79□□□□□ -0.36
TSPAN4-218ENST00000529566 TRAV18A0A075B6X5 111 aa12.79□□□□□ -0.36
TSPAN4-218ENST00000529566 BET1O15155 118 aa12.79□□□□□ -0.36
TSPAN4-218ENST00000529566 VDAC2P45880 294 aaPredicted RBP12.79□□□□□ -0.36
TSPAN4-218ENST00000529566 F2RL1P55085 397 aa12.79□□□□□ -0.36
TSPAN4-218ENST00000529566 PITPNAQ00169 270 aa12.79□□□□□ -0.36
TSPAN4-218ENST00000529566 GPR107Q5VW38 600 aa12.79□□□□□ -0.36
TSPAN4-218ENST00000529566 HIST2H2BDQ6DRA6 164 aa12.79□□□□□ -0.36
TSPAN4-218ENST00000529566 Q8N9W7 124 aa12.79□□□□□ -0.36
TSPAN4-218ENST00000529566 EDARADDQ8WWZ3 215 aa12.79□□□□□ -0.36
TSPAN4-218ENST00000529566 KCTD12Q96CX2 325 aaKnown RBP12.79□□□□□ -0.36
TSPAN4-218ENST00000529566 ST6GALNAC5Q9BVH7 336 aa12.79□□□□□ -0.36
TSPAN4-218ENST00000529566 AUNIPQ9H7T9 357 aa12.79□□□□□ -0.36
TSPAN4-218ENST00000529566 RNF150Q9ULK6 438 aa12.79□□□□□ -0.36
TSPAN4-218ENST00000529566 WNK1Q9H4A3 2382 aa12.79□□□□□ -0.36
TSPAN4-218ENST00000529566 XRCC3O43542 346 aa12.78□□□□□ -0.36
TSPAN4-218ENST00000529566 UBE2NLQ5JXB2 153 aa12.78□□□□□ -0.36
TSPAN4-218ENST00000529566 OR10J5Q8NHC4 309 aa12.78□□□□□ -0.36
TSPAN4-218ENST00000529566 S1PR3Q99500 378 aa12.78□□□□□ -0.36
TSPAN4-218ENST00000529566 DIABLOQ9NR28 239 aa12.78□□□□□ -0.36
TSPAN4-218ENST00000529566 GNG2P59768 71 aa12.77□□□□□ -0.37
TSPAN4-218ENST00000529566 GPR141Q7Z602 305 aa12.77□□□□□ -0.37
TSPAN4-218ENST00000529566 H1FOOQ8IZA3 346 aaPredicted RBP12.77□□□□□ -0.37
TSPAN4-218ENST00000529566 FAM71E2Q8N5Q1 922 aa12.77□□□□□ -0.37
TSPAN4-218ENST00000529566 SAMD12Q8N8I0 201 aa12.77□□□□□ -0.37
TSPAN4-218ENST00000529566 C11orf44Q8N8P7 122 aa12.77□□□□□ -0.37
TSPAN4-218ENST00000529566 OR8H1Q8NGG4 311 aa12.77□□□□□ -0.37
TSPAN4-218ENST00000529566 OR5AN1Q8NGI8 311 aa12.77□□□□□ -0.37
TSPAN4-218ENST00000529566 PHF21AQ96BD5 680 aa12.77□□□□□ -0.37
TSPAN4-218ENST00000529566 GAB2Q9UQC2 676 aa12.77□□□□□ -0.37
TSPAN4-218ENST00000529566 NBEAL1Q6ZS30 2694 aa12.76□□□□□ -0.37
TSPAN4-218ENST00000529566 LINC01548A6NM66 108 aa12.76□□□□□ -0.37
TSPAN4-218ENST00000529566 NCBP2LA6PVI3 153 aaKnown RBP12.76□□□□□ -0.37
TSPAN4-218ENST00000529566 H0YJW9 148 aa12.76□□□□□ -0.37
TSPAN4-218ENST00000529566 IGHG2P01859 326 aa12.76□□□□□ -0.37
TSPAN4-218ENST00000529566 CD28P10747 220 aa12.76□□□□□ -0.37
TSPAN4-218ENST00000529566 PTHLHP12272 177 aa12.76□□□□□ -0.37
TSPAN4-218ENST00000529566 LINC00205P59089 165 aa12.76□□□□□ -0.37
TSPAN4-218ENST00000529566 C9orf152Q5JTZ5 239 aa12.76□□□□□ -0.37
TSPAN4-218ENST00000529566 S100A16Q96FQ6 103 aaKnown RBP12.76□□□□□ -0.37
TSPAN4-218ENST00000529566 C5orf30Q96GV9 206 aa12.76□□□□□ -0.37
TSPAN4-218ENST00000529566 EIF4EP06730 217 aaKnown RBP12.75□□□□□ -0.37
TSPAN4-218ENST00000529566 OR8U9P0C7N5 309 aa12.75□□□□□ -0.37
TSPAN4-218ENST00000529566 GPR12P47775 334 aa12.75□□□□□ -0.37
TSPAN4-218ENST00000529566 RORCP51449 518 aa12.75□□□□□ -0.37
TSPAN4-218ENST00000529566 ACTBP60709 375 aa12.75□□□□□ -0.37
TSPAN4-218ENST00000529566 ARSJQ5FYB0 599 aaPredicted RBP12.75□□□□□ -0.37
TSPAN4-218ENST00000529566 TCTEX1D4Q5JR98 221 aa12.75□□□□□ -0.37
TSPAN4-218ENST00000529566 CNIH2Q6PI25 160 aa12.75□□□□□ -0.37
TSPAN4-218ENST00000529566 GLDNQ6ZMI3 551 aaPredicted RBP12.75□□□□□ -0.37
TSPAN4-218ENST00000529566 HOGA1Q86XE5 327 aa12.75□□□□□ -0.37
TSPAN4-218ENST00000529566 GVQW1Q8N7I0 195 aa12.75□□□□□ -0.37
TSPAN4-218ENST00000529566 ZNF383Q8NA42 475 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms