RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, human

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP98-215	ENST00000529063	CRIP2	P52943	208 aa	Predicted RBP	4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	GABPB1	Q06547	395 aa	Predicted RBP	4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	GNMT	Q14749	295 aa		4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	MED22	Q15528	200 aa		4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	MMD	Q15546	238 aa		4.6	□□□□□ -1.67
NUP98-215	ENST00000529063		Q3ZCU0	254 aa		4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	TMEM88	Q6PEY1	159 aa		4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	ZNF497	Q6ZNH5	498 aa		4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	AMIGO2	Q86SJ2	522 aa		4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	SERPINA12	Q8IW75	414 aa		4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	ODF3L1	Q8IXM7	274 aa		4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	GAPT	Q8N292	157 aa		4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	NKAIN3	Q8N8D7	197 aa		4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	OR10V1	Q8NGI7	309 aa		4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	CCDC107	Q8WV48	283 aa		4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	LGALS12	Q96DT0	336 aa		4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	PDCD1LG2	Q9BQ51	273 aa		4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	ALG8	Q9BVK2	526 aa		4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	TOLLIP	Q9H0E2	274 aa		4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	OR51J1	Q9H342	316 aa		4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	RIBC2	Q9H4K1	309 aa		4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	PARP11	Q9NR21	331 aa		4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	FAM118A	Q9NWS6	357 aa		4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	TAS2R4	Q9NYW5	299 aa		4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	IL36G	Q9NZH8	169 aa		4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	RCC2	Q9P258	522 aa	Known RBP	4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	KIAA1456	Q9P272	454 aa		4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	ST3GAL6	Q9Y274	331 aa		4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	EXOG	Q9Y2C4	368 aa	Known RBP	4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	RYR1	P21817	5038 aa		4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	KIAA1109	Q2LD37	5005 aa		4.6	□□□□□ -1.67
NUP98-215	ENST00000529063	KRTAP23-1	A1A580	65 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	LINC01619	G3V211	115 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	LANCL1	O43813	399 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	NXPH3	O95157	252 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	NDUFA3	O95167	84 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	IGLV1-51	P01701	117 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	HBZ	P02008	142 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	LGALS1	P09382	135 aa	Known RBP	4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	EGR2	P11161	476 aa	Predicted RBP	4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	GABRB1	P18505	474 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	GZMH	P20718	246 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	IL3RA	P26951	378 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	ACTB	P60709	375 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	ADARB1	P78563	741 aa	Known RBP	4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	RSU1	Q15404	277 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	C5orf64	Q2M2E5	130 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	SLC25A30	Q5SVS4	291 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	XAF1	Q6GPH4	301 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	LHFPL3	Q86UP9	236 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	LYPD6	Q86Y78	171 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	ACBD7	Q8N6N7	88 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	CCDC197	Q8NCU1	140 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	OR5D14	Q8NGL3	314 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	OR6Q1	Q8NGQ2	317 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	OR52N1	Q8NH53	320 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	OR1L1	Q8NH94	360 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	TSEN15	Q8WW01	171 aa	Known RBP	4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	RFK	Q969G6	155 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	ORAI1	Q96D31	301 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	GPER1	Q99527	375 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	NABP2	Q9BQ15	211 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	THAP7	Q9BT49	309 aa	Predicted RBP	4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	MRPL20	Q9BYC9	149 aa	Known RBP	4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	ANKRD60	Q9BZ19	345 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	FAM192A	Q9GZU8	254 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	DHDH	Q9UQ10	334 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	GAB2	Q9UQC2	676 aa		4.59	□□□□□ -1.67
NUP98-215	ENST00000529063	TNC	P24821	2201 aa		4.58	□□□□□ -1.68
NUP98-215	ENST00000529063		A0A1W2PN81	502 aa		4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	TMEM212	A6NML5	194 aa		4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	AIP	O00170	330 aa		4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	NBR2	O15453	112 aa		4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	GYG2	O15488	501 aa		4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	ATP8B1	O43520	1251 aa		4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	IGHV3-11	P01762	117 aa		4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	MBP	P02686	304 aa	Predicted RBP	4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	OR8U9	P0C7N5	309 aa		4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	RCC1	P18754	421 aa	Predicted RBP	4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	RAB3A	P20336	220 aa		4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	SERPINA2	P20848	420 aa		4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	CHRNA7	P36544	502 aa		4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	OR3A3	P47888	321 aa		4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	SOX2	P48431	317 aa		4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	GTF2A1	P52655	376 aa	Predicted RBP	4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	SNRPG	P62308	76 aa	Known RBP	4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	HAGH	Q16775	308 aa		4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	ECSCR	Q19T08	205 aa		4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	LRRC36	Q1X8D7	754 aa		4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	MPV17L	Q2QL34	196 aa		4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	DNAL1	Q4LDG9	190 aa		4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	ATAD3C	Q5T2N8	411 aa		4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	SYT6	Q5T7P8	510 aa	Predicted RBP	4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	TMEM65	Q6PI78	240 aa		4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	IL34	Q6ZMJ4	242 aa		4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	ZNF833P	Q6ZTB9	187 aa		4.58	□□□□□ -1.68
NUP98-215	ENST00000529063		Q6ZWC4	215 aa		4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	LINC00596	Q86U02	117 aa		4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	SATL1	Q86VE3	508 aa		4.58	□□□□□ -1.68
NUP98-215	ENST00000529063	SYS1	Q8N2H4	156 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms