RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 KIAA1324LA8MWY0 1029 aaPredicted RBP12.29□□□□□ -0.44
ECHDC1-220ENST00000528402 SIGLEC5O15389 551 aa12.29□□□□□ -0.44
ECHDC1-220ENST00000528402 SYNGR2O43760 224 aa12.29□□□□□ -0.44
ECHDC1-220ENST00000528402 NHLH2Q02577 135 aa12.29□□□□□ -0.44
ECHDC1-220ENST00000528402 STX12Q86Y82 276 aa12.29□□□□□ -0.44
ECHDC1-220ENST00000528402 COMMD1Q8N668 190 aa12.29□□□□□ -0.44
ECHDC1-220ENST00000528402 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.29□□□□□ -0.44
ECHDC1-220ENST00000528402 OR10A7Q8NGE5 316 aa12.29□□□□□ -0.44
ECHDC1-220ENST00000528402 OR1S2Q8NGQ3 325 aa12.29□□□□□ -0.44
ECHDC1-220ENST00000528402 UBALD1Q8TB05 177 aa12.29□□□□□ -0.44
ECHDC1-220ENST00000528402 RNASE6Q93091 150 aaKnown RBP12.29□□□□□ -0.44
ECHDC1-220ENST00000528402 AGMATQ9BSE5 352 aa12.29□□□□□ -0.44
ECHDC1-220ENST00000528402 SMIM3Q9BZL3 60 aa12.29□□□□□ -0.44
ECHDC1-220ENST00000528402 PARP12Q9H0J9 701 aaKnown RBP12.29□□□□□ -0.44
ECHDC1-220ENST00000528402 LINC00574Q9H8X3 128 aa12.29□□□□□ -0.44
ECHDC1-220ENST00000528402 CALYQ9NYX4 217 aa12.29□□□□□ -0.44
ECHDC1-220ENST00000528402 COQ3Q9NZJ6 369 aa12.29□□□□□ -0.44
ECHDC1-220ENST00000528402 CACNG5Q9UF02 275 aa12.29□□□□□ -0.44
ECHDC1-220ENST00000528402 RNF150Q9ULK6 438 aa12.29□□□□□ -0.44
ECHDC1-220ENST00000528402 DYSFO75923 2080 aa12.29□□□□□ -0.44
ECHDC1-220ENST00000528402 IGHV3OR15-7A0A075B7D8 119 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 KBTBD11-OT1A0A1B0GTJ5 212 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 ZNF729A6NN14 1252 aaPredicted RBP12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 TRIM77I1YAP6 450 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 LGALS8O00214 317 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 RAB29O14966 203 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 SCAF4O95104 1147 aaKnown RBP12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 IGKV1-5P01602 117 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 CD3EP07766 207 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 APOBEC3AP31941 199 aaPredicted RBP12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 CD80P33681 288 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 KIR2DS2P43631 304 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 GPR12P47775 334 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 F2RL1P55085 397 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 EDDM3BP56851 147 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 PJVKQ0ZLH3 352 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 EFNB3Q15768 340 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 MIDNQ504T8 468 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 SPRNQ5BIV9 151 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 SPAG16Q8N0X2 631 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 TPRX1Q8N7U7 411 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 ZNRF1Q8ND25 227 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 RFESDQ8TAC1 157 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 TCTEX1D2Q8WW35 142 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 GNPNAT1Q96EK6 184 aaPredicted RBP12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 CLN8Q9UBY8 286 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 IGSF23A1L1A6 192 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 FAM90A9PA6NNJ1 464 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 UMAD1C9J7I0 102 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 RBFOX2O43251 390 aaKnown RBP eCLIP12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 FBXO24O75426 580 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 CLDN14O95500 239 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 DANCRP0C864 163 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 EPHA1P21709 976 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 SULT1A1P50225 295 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 TLE1Q04724 770 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 MEF2CQ06413 473 aaPredicted RBP12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 LYPD6BQ8NI32 183 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 GAFA1Q96PS6 74 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 MAGT1Q9H0U3 335 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 WFDC1Q9HC57 220 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 PSG11Q9UQ72 335 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 ARID1AO14497 2285 aa12.28□□□□□ -0.44
ECHDC1-220ENST00000528402 A0A0G2JRQ6 117 aa12.27□□□□□ -0.45
ECHDC1-220ENST00000528402 hADV38S2A0JD32 116 aa12.27□□□□□ -0.45
ECHDC1-220ENST00000528402 SHISA9B4DS77 424 aa12.27□□□□□ -0.45
ECHDC1-220ENST00000528402 B9A039 149 aa12.27□□□□□ -0.45
ECHDC1-220ENST00000528402 CCL21O00585 134 aa12.27□□□□□ -0.45
ECHDC1-220ENST00000528402 TXNL1O43396 289 aa12.27□□□□□ -0.45
ECHDC1-220ENST00000528402 CYB5R3P00387 301 aaPredicted RBP12.27□□□□□ -0.45
ECHDC1-220ENST00000528402 TFF1P04155 84 aa12.27□□□□□ -0.45
ECHDC1-220ENST00000528402 P0C879 139 aa12.27□□□□□ -0.45
ECHDC1-220ENST00000528402 PAX9P55771 341 aa12.27□□□□□ -0.45
ECHDC1-220ENST00000528402 LOXL3P58215 753 aa12.27□□□□□ -0.45
ECHDC1-220ENST00000528402 PXDC1Q5TGL8 231 aa12.27□□□□□ -0.45
ECHDC1-220ENST00000528402 LINC00052Q96N35 136 aa12.27□□□□□ -0.45
ECHDC1-220ENST00000528402 SAP30LQ9HAJ7 183 aa12.27□□□□□ -0.45
ECHDC1-220ENST00000528402 PRELID3BQ9Y3B1 194 aa12.27□□□□□ -0.45
ECHDC1-220ENST00000528402 ANKRD11Q6UB99 2663 aaPredicted RBP12.27□□□□□ -0.45
ECHDC1-220ENST00000528402 DSCAMO60469 2012 aa12.26□□□□□ -0.45
ECHDC1-220ENST00000528402 PPIAL4EA0A075B759 164 aa12.26□□□□□ -0.45
ECHDC1-220ENST00000528402 PPIAL4DF5H284 164 aa12.26□□□□□ -0.45
ECHDC1-220ENST00000528402 NDUFA2O43678 99 aa12.26□□□□□ -0.45
ECHDC1-220ENST00000528402 CRYZL1O95825 349 aa12.26□□□□□ -0.45
ECHDC1-220ENST00000528402 HPRT1P00492 218 aa12.26□□□□□ -0.45
ECHDC1-220ENST00000528402 PPIAL4FP0DN26 164 aa12.26□□□□□ -0.45
ECHDC1-220ENST00000528402 HBG1P69891 147 aa12.26□□□□□ -0.45
ECHDC1-220ENST00000528402 HBG2P69892 147 aa12.26□□□□□ -0.45
ECHDC1-220ENST00000528402 HOXA4Q00056 320 aaPredicted RBP12.26□□□□□ -0.45
ECHDC1-220ENST00000528402 TUSC1Q2TAM9 212 aa12.26□□□□□ -0.45
ECHDC1-220ENST00000528402 MST1LQ2TV78 715 aa12.26□□□□□ -0.45
ECHDC1-220ENST00000528402 BTNL8Q6UX41 500 aa12.26□□□□□ -0.45
ECHDC1-220ENST00000528402 Q6ZRM9 215 aa12.26□□□□□ -0.45
ECHDC1-220ENST00000528402 ZNF808Q8N4W9 903 aaPredicted RBP12.26□□□□□ -0.45
ECHDC1-220ENST00000528402 BSCL2Q96G97 398 aaPredicted RBP12.26□□□□□ -0.45
ECHDC1-220ENST00000528402 ADTRPQ96IZ2 230 aa12.26□□□□□ -0.45
ECHDC1-220ENST00000528402 CIB3Q96Q77 187 aaPredicted RBP12.26□□□□□ -0.45
ECHDC1-220ENST00000528402 TSNAXQ99598 290 aaKnown RBP12.26□□□□□ -0.45
ECHDC1-220ENST00000528402 ATP5SQ99766 215 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms