RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 PITPNAQ00169 270 aa18.12■□□□□ 0.49
CPSF1-202ENST00000527827 HMGN3Q15651 99 aa18.12■□□□□ 0.49
CPSF1-202ENST00000527827 FAM71F2Q6NXP2 309 aa18.12■□□□□ 0.49
CPSF1-202ENST00000527827 CD200R1LQ6Q8B3 271 aa18.12■□□□□ 0.49
CPSF1-202ENST00000527827 Q8N1Y9 231 aa18.12■□□□□ 0.49
CPSF1-202ENST00000527827 FAM46BQ96A09 425 aa18.12■□□□□ 0.49
CPSF1-202ENST00000527827 DERL3Q96Q80 235 aa18.12■□□□□ 0.49
CPSF1-202ENST00000527827 GAB2Q9UQC2 676 aa18.12■□□□□ 0.49
CPSF1-202ENST00000527827 ST8SIA5O15466 376 aa18.11■□□□□ 0.49
CPSF1-202ENST00000527827 HSPB1P04792 205 aaKnown RBP18.11■□□□□ 0.49
CPSF1-202ENST00000527827 CT45A6P0DMU7 189 aa18.11■□□□□ 0.49
CPSF1-202ENST00000527827 CT45A5P0DMU8 189 aa18.11■□□□□ 0.49
CPSF1-202ENST00000527827 CT45A7P0DMV0 189 aa18.11■□□□□ 0.49
CPSF1-202ENST00000527827 IGHV4-30-4P0DP06 118 aa18.11■□□□□ 0.49
CPSF1-202ENST00000527827 HAPLN4Q86UW8 402 aa18.11■□□□□ 0.49
CPSF1-202ENST00000527827 OR4C12Q96R67 309 aa18.11■□□□□ 0.49
CPSF1-202ENST00000527827 SULT4A1Q9BR01 284 aa18.11■□□□□ 0.49
CPSF1-202ENST00000527827 EDA2RQ9HAV5 297 aa18.11■□□□□ 0.49
CPSF1-202ENST00000527827 LRRC42Q9Y546 428 aa18.11■□□□□ 0.49
CPSF1-202ENST00000527827 DYNC1I1O14576 645 aa18.1■□□□□ 0.49
CPSF1-202ENST00000527827 LDLRAD4O15165 306 aa18.1■□□□□ 0.49
CPSF1-202ENST00000527827 SNRPBP14678 240 aaKnown RBP18.1■□□□□ 0.49
CPSF1-202ENST00000527827 TMEM267Q0VDI3 215 aaPredicted RBP18.1■□□□□ 0.49
CPSF1-202ENST00000527827 DOC2BQ14184 412 aa18.1■□□□□ 0.49
CPSF1-202ENST00000527827 RPL39P5Q59GN2 51 aa18.1■□□□□ 0.49
CPSF1-202ENST00000527827 PYHIN1Q6K0P9 492 aa18.1■□□□□ 0.49
CPSF1-202ENST00000527827 GLDNQ6ZMI3 551 aaPredicted RBP18.1■□□□□ 0.49
CPSF1-202ENST00000527827 ZNF555Q8NEP9 628 aa18.1■□□□□ 0.49
CPSF1-202ENST00000527827 FLYWCH2Q96CP2 140 aaKnown RBP18.1■□□□□ 0.49
CPSF1-202ENST00000527827 TMEM80Q96HE8 168 aa18.1■□□□□ 0.49
CPSF1-202ENST00000527827 RHOVQ96L33 236 aa18.1■□□□□ 0.49
CPSF1-202ENST00000527827 MS4A10Q96PG2 267 aa18.1■□□□□ 0.49
CPSF1-202ENST00000527827 FAM103A1Q9BTL3 118 aaKnown RBP18.1■□□□□ 0.49
CPSF1-202ENST00000527827 C19orf73Q9NVV2 129 aa18.1■□□□□ 0.49
CPSF1-202ENST00000527827 PNMA8CA0A1B0GUJ8 204 aa18.09■□□□□ 0.49
CPSF1-202ENST00000527827 PLGLAQ15195 96 aa18.09■□□□□ 0.49
CPSF1-202ENST00000527827 ACTBL2Q562R1 376 aa18.09■□□□□ 0.49
CPSF1-202ENST00000527827 UNQ5815/PRO19632Q6UWF5 114 aa18.09■□□□□ 0.49
CPSF1-202ENST00000527827 PPP1R27Q86WC6 154 aa18.09■□□□□ 0.49
CPSF1-202ENST00000527827 NKAIN3Q8N8D7 197 aa18.09■□□□□ 0.49
CPSF1-202ENST00000527827 ABHD5Q8WTS1 349 aa18.09■□□□□ 0.49
CPSF1-202ENST00000527827 UQCC2Q9BRT2 126 aa18.09■□□□□ 0.49
CPSF1-202ENST00000527827 S100A14Q9HCY8 104 aa18.09■□□□□ 0.49
CPSF1-202ENST00000527827 SMPD3Q9NY59 655 aaPredicted RBP18.09■□□□□ 0.49
CPSF1-202ENST00000527827 PIPOXQ9P0Z9 390 aa18.09■□□□□ 0.49
CPSF1-202ENST00000527827 STEAP1Q9UHE8 339 aa18.09■□□□□ 0.49
CPSF1-202ENST00000527827 OR5H14A6NHG9 310 aa18.08■□□□□ 0.48
CPSF1-202ENST00000527827 A8MZ25 164 aa18.08■□□□□ 0.48
CPSF1-202ENST00000527827 H0YJW9 148 aa18.08■□□□□ 0.48
CPSF1-202ENST00000527827 RAB29O14966 203 aa18.08■□□□□ 0.48
CPSF1-202ENST00000527827 IGLV1-51P01701 117 aa18.08■□□□□ 0.48
CPSF1-202ENST00000527827 TPPP2P59282 170 aa18.08■□□□□ 0.48
CPSF1-202ENST00000527827 AKIRIN2Q53H80 203 aa18.08■□□□□ 0.48
CPSF1-202ENST00000527827 PQLC1Q8N2U9 271 aa18.08■□□□□ 0.48
CPSF1-202ENST00000527827 IL1F10Q8WWZ1 152 aa18.08■□□□□ 0.48
CPSF1-202ENST00000527827 FAAP24Q9BTP7 215 aa18.08■□□□□ 0.48
CPSF1-202ENST00000527827 PARP12Q9H0J9 701 aaKnown RBP18.08■□□□□ 0.48
CPSF1-202ENST00000527827 CNOT2Q9NZN8 540 aaKnown RBP18.08■□□□□ 0.48
CPSF1-202ENST00000527827 SLC23A1Q9UHI7 598 aa18.08■□□□□ 0.48
CPSF1-202ENST00000527827 RNF150Q9ULK6 438 aa18.08■□□□□ 0.48
CPSF1-202ENST00000527827 HSPA12AO43301 675 aa18.07■□□□□ 0.48
CPSF1-202ENST00000527827 SVOPQ8N4V2 548 aa18.07■□□□□ 0.48
CPSF1-202ENST00000527827 LFNGQ8NES3 379 aa18.07■□□□□ 0.48
CPSF1-202ENST00000527827 NEDD4LQ96PU5 975 aa18.07■□□□□ 0.48
CPSF1-202ENST00000527827 CLCC1Q96S66 551 aa18.07■□□□□ 0.48
CPSF1-202ENST00000527827 ABRACLQ9P1F3 81 aa18.07■□□□□ 0.48
CPSF1-202ENST00000527827 GHRLQ9UBU3 117 aa18.07■□□□□ 0.48
CPSF1-202ENST00000527827 STUB1Q9UNE7 303 aa18.07■□□□□ 0.48
CPSF1-202ENST00000527827 TNCP24821 2201 aa18.06■□□□□ 0.48
CPSF1-202ENST00000527827 ARPC1BO15143 372 aaKnown RBP18.06■□□□□ 0.48
CPSF1-202ENST00000527827 GSTP1P09211 210 aaKnown RBP18.06■□□□□ 0.48
CPSF1-202ENST00000527827 MC5RP33032 325 aa18.06■□□□□ 0.48
CPSF1-202ENST00000527827 TAS2R43P59537 309 aa18.06■□□□□ 0.48
CPSF1-202ENST00000527827 MED21Q13503 144 aa18.06■□□□□ 0.48
CPSF1-202ENST00000527827 OR10K2Q6IF99 312 aa18.06■□□□□ 0.48
CPSF1-202ENST00000527827 ZNF880Q6PDB4 577 aa18.06■□□□□ 0.48
CPSF1-202ENST00000527827 C6orf201Q7Z4U5 140 aa18.06■□□□□ 0.48
CPSF1-202ENST00000527827 OR5AN1Q8NGI8 311 aa18.06■□□□□ 0.48
CPSF1-202ENST00000527827 GGHQ92820 318 aa18.06■□□□□ 0.48
CPSF1-202ENST00000527827 ISOC1Q96CN7 298 aa18.06■□□□□ 0.48
CPSF1-202ENST00000527827 ABHD14BQ96IU4 210 aa18.06■□□□□ 0.48
CPSF1-202ENST00000527827 ELOVL1Q9BW60 279 aa18.06■□□□□ 0.48
CPSF1-202ENST00000527827 SLA2Q9H6Q3 261 aa18.06■□□□□ 0.48
CPSF1-202ENST00000527827 WASHC3Q9Y3C0 194 aa18.06■□□□□ 0.48
CPSF1-202ENST00000527827 RBBP9O75884 186 aa18.05■□□□□ 0.48
CPSF1-202ENST00000527827 NAPSAO96009 420 aa18.05■□□□□ 0.48
CPSF1-202ENST00000527827 ZNF562Q6V9R5 426 aa18.05■□□□□ 0.48
CPSF1-202ENST00000527827 C10orf67Q8IYJ2 551 aa18.05■□□□□ 0.48
CPSF1-202ENST00000527827 RNF5Q99942 180 aa18.05■□□□□ 0.48
CPSF1-202ENST00000527827 AGMATQ9BSE5 352 aa18.05■□□□□ 0.48
CPSF1-202ENST00000527827 METTL1Q9UBP6 276 aaKnown RBP18.05■□□□□ 0.48
CPSF1-202ENST00000527827 H7C2Y5 167 aa18.04■□□□□ 0.48
CPSF1-202ENST00000527827 CA2P00918 260 aa18.04■□□□□ 0.48
CPSF1-202ENST00000527827 CD1AP06126 327 aa18.04■□□□□ 0.48
CPSF1-202ENST00000527827 CELP19835 753 aa18.04■□□□□ 0.48
CPSF1-202ENST00000527827 HTR2CP28335 458 aa18.04■□□□□ 0.48
CPSF1-202ENST00000527827 RPS27AP62979 156 aaKnown RBP18.04■□□□□ 0.48
CPSF1-202ENST00000527827 ST3GAL4Q11206 333 aa18.04■□□□□ 0.48
CPSF1-202ENST00000527827 PSG5Q15238 335 aa18.04■□□□□ 0.48
CPSF1-202ENST00000527827 ANKRD13BQ86YJ7 626 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms