RNA–Protein interactions for RNA: ENST00000526204.5

VPS28-205, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,120 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-205ENST00000526204 TCTEX1D1Q8N7M0 179 aa17.84■□□□□ 0.45
VPS28-205ENST00000526204 WDR31Q8NA23 367 aa17.84■□□□□ 0.45
VPS28-205ENST00000526204 HSPB7Q9UBY9 170 aa17.84■□□□□ 0.45
VPS28-205ENST00000526204 MED12LQ86YW9 2145 aa17.84■□□□□ 0.45
VPS28-205ENST00000526204 ZNF891A8MT65 544 aaPredicted RBP17.84■□□□□ 0.45
VPS28-205ENST00000526204 B4DEV8 164 aa17.84■□□□□ 0.45
VPS28-205ENST00000526204 HBZP02008 142 aa17.84■□□□□ 0.45
VPS28-205ENST00000526204 FBP1P09467 338 aa17.84■□□□□ 0.45
VPS28-205ENST00000526204 KITLGP21583 273 aa17.84■□□□□ 0.45
VPS28-205ENST00000526204 S100A12P80511 92 aa17.84■□□□□ 0.45
VPS28-205ENST00000526204 FAM186AA6NE01 2351 aa17.84■□□□□ 0.45
VPS28-205ENST00000526204 IFNL4K9M1U5 179 aa17.83■□□□□ 0.45
VPS28-205ENST00000526204 WNT9BO14905 357 aa17.83■□□□□ 0.45
VPS28-205ENST00000526204 BCL2P10415 239 aa17.83■□□□□ 0.45
VPS28-205ENST00000526204 AESQ08117 197 aa17.83■□□□□ 0.45
VPS28-205ENST00000526204 EIF4EBP1Q13541 118 aaPredicted RBP17.83■□□□□ 0.45
VPS28-205ENST00000526204 TMEM41BQ5BJD5 291 aa17.83■□□□□ 0.45
VPS28-205ENST00000526204 IGFL2Q6UWQ7 119 aa17.83■□□□□ 0.45
VPS28-205ENST00000526204 TMEM14EPQ6UXP3 125 aa17.83■□□□□ 0.45
VPS28-205ENST00000526204 ZNF826PQ6ZT77 177 aa17.83■□□□□ 0.45
VPS28-205ENST00000526204 FDCSPQ8NFU4 85 aa17.83■□□□□ 0.45
VPS28-205ENST00000526204 OR4C12Q96R67 309 aa17.83■□□□□ 0.45
VPS28-205ENST00000526204 TCEAL7Q9BRU2 100 aa17.83■□□□□ 0.45
VPS28-205ENST00000526204 NKX2-8O15522 239 aa17.83■□□□□ 0.44
VPS28-205ENST00000526204 TIMM8AO60220 97 aaPredicted RBP17.83■□□□□ 0.44
VPS28-205ENST00000526204 IGHV2-5P01817 119 aa17.83■□□□□ 0.44
VPS28-205ENST00000526204 OR2B8PP59922 312 aa17.83■□□□□ 0.44
VPS28-205ENST00000526204 SLC38A11Q08AI6 406 aa17.83■□□□□ 0.44
VPS28-205ENST00000526204 CXorf67Q86X51 503 aaPredicted RBP17.83■□□□□ 0.44
VPS28-205ENST00000526204 SARAFQ96BY9 339 aa17.83■□□□□ 0.44
VPS28-205ENST00000526204 RBKSQ9H477 322 aa17.83■□□□□ 0.44
VPS28-205ENST00000526204 TRAV17A0A0B4J275 112 aa17.82■□□□□ 0.44
VPS28-205ENST00000526204 A0A1W2PPE3 182 aa17.82■□□□□ 0.44
VPS28-205ENST00000526204 AGFG2O95081 481 aa17.82■□□□□ 0.44
VPS28-205ENST00000526204 S100A9P06702 114 aaKnown RBP17.82■□□□□ 0.44
VPS28-205ENST00000526204 P0C879 139 aa17.82■□□□□ 0.44
VPS28-205ENST00000526204 SMIM6P0DI80 62 aa17.82■□□□□ 0.44
VPS28-205ENST00000526204 FABP9Q0Z7S8 132 aa17.82■□□□□ 0.44
VPS28-205ENST00000526204 WDR82Q6UXN9 313 aa17.82■□□□□ 0.44
VPS28-205ENST00000526204 C1orf174Q8IYL3 243 aa17.82■□□□□ 0.44
VPS28-205ENST00000526204 OR52L2PQ8NGH6 319 aa17.82■□□□□ 0.44
VPS28-205ENST00000526204 TAF15Q92804 592 aaKnown RBP eCLIP17.82■□□□□ 0.44
VPS28-205ENST00000526204 RCC1LQ96I51 464 aaKnown RBP17.82■□□□□ 0.44
VPS28-205ENST00000526204 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.82■□□□□ 0.44
VPS28-205ENST00000526204 TIMM9Q9Y5J7 89 aa17.82■□□□□ 0.44
VPS28-205ENST00000526204 RAMP3O60896 148 aa17.81■□□□□ 0.44
VPS28-205ENST00000526204 CLDN1O95832 211 aa17.81■□□□□ 0.44
VPS28-205ENST00000526204 KRASP01116 189 aa17.81■□□□□ 0.44
VPS28-205ENST00000526204 GABRA2P47869 451 aa17.81■□□□□ 0.44
VPS28-205ENST00000526204 SMIM21Q3B7S5 101 aa17.81■□□□□ 0.44
VPS28-205ENST00000526204 ZNF718Q3SXZ3 478 aa17.81■□□□□ 0.44
VPS28-205ENST00000526204 COQ2Q96H96 371 aa17.81■□□□□ 0.44
VPS28-205ENST00000526204 LURAP1Q96LR2 239 aa17.81■□□□□ 0.44
VPS28-205ENST00000526204 P2RX4Q99571 388 aa17.81■□□□□ 0.44
VPS28-205ENST00000526204 VSIRQ9H7M9 311 aa17.81■□□□□ 0.44
VPS28-205ENST00000526204 LRRC30A6NM36 301 aa17.81■□□□□ 0.44
VPS28-205ENST00000526204 PRR33A8MZF0 331 aa17.81■□□□□ 0.44
VPS28-205ENST00000526204 PNRC1Q12796 327 aaPredicted RBP17.81■□□□□ 0.44
VPS28-205ENST00000526204 ZNF726P1Q15940 193 aa17.81■□□□□ 0.44
VPS28-205ENST00000526204 ATP6V1FQ16864 119 aa17.81■□□□□ 0.44
VPS28-205ENST00000526204 VWA1Q6PCB0 445 aa17.81■□□□□ 0.44
VPS28-205ENST00000526204 LCN15Q6UWW0 184 aa17.81■□□□□ 0.44
VPS28-205ENST00000526204 C9orf106Q8NAJ2 232 aa17.81■□□□□ 0.44
VPS28-205ENST00000526204 LAMP3Q9UQV4 416 aa17.81■□□□□ 0.44
VPS28-205ENST00000526204 ZFP92A6NM28 416 aa17.8■□□□□ 0.44
VPS28-205ENST00000526204 AP4M1O00189 453 aa17.8■□□□□ 0.44
VPS28-205ENST00000526204 IFNA1P01562 189 aa17.8■□□□□ 0.44
VPS28-205ENST00000526204 CECR9P0C854 216 aa17.8■□□□□ 0.44
VPS28-205ENST00000526204 GCH1P30793 250 aa17.8■□□□□ 0.44
VPS28-205ENST00000526204 RPL30P62888 115 aaKnown RBP17.8■□□□□ 0.44
VPS28-205ENST00000526204 MZT1Q08AG7 82 aa17.8■□□□□ 0.44
VPS28-205ENST00000526204 PMS2P11Q13670 270 aa17.8■□□□□ 0.44
VPS28-205ENST00000526204 MRGPRGQ86SM5 289 aa17.8■□□□□ 0.44
VPS28-205ENST00000526204 PLSCR4Q9NRQ2 329 aa17.8■□□□□ 0.44
VPS28-205ENST00000526204 ZNF727A8MUV8 499 aa17.8■□□□□ 0.44
VPS28-205ENST00000526204 G6PCP35575 357 aa17.8■□□□□ 0.44
VPS28-205ENST00000526204 GLIPR1P48060 266 aa17.8■□□□□ 0.44
VPS28-205ENST00000526204 RAB11AP62491 216 aa17.8■□□□□ 0.44
VPS28-205ENST00000526204 TRAT1Q6PIZ9 186 aa17.8■□□□□ 0.44
VPS28-205ENST00000526204 CENPVQ7Z7K6 275 aaPredicted RBP17.8■□□□□ 0.44
VPS28-205ENST00000526204 PIP4P1Q86T03 277 aa17.8■□□□□ 0.44
VPS28-205ENST00000526204 ZNF808Q8N4W9 903 aaPredicted RBP17.8■□□□□ 0.44
VPS28-205ENST00000526204 MRGPRDQ8TDS7 321 aa17.8■□□□□ 0.44
VPS28-205ENST00000526204 TCTEX1D2Q8WW35 142 aa17.8■□□□□ 0.44
VPS28-205ENST00000526204 ZNF665Q9H7R5 613 aa17.8■□□□□ 0.44
VPS28-205ENST00000526204 CLDN14O95500 239 aa17.79■□□□□ 0.44
VPS28-205ENST00000526204 IGLV1-44P01699 117 aa17.79■□□□□ 0.44
VPS28-205ENST00000526204 ZNF816Q0VGE8 651 aaPredicted RBP17.79■□□□□ 0.44
VPS28-205ENST00000526204 PRAMEF6Q5VXH4 476 aa17.79■□□□□ 0.44
VPS28-205ENST00000526204 MBNL2Q5VZF2 373 aaKnown RBP17.79■□□□□ 0.44
VPS28-205ENST00000526204 ZNF66Q6ZN08 573 aa17.79■□□□□ 0.44
VPS28-205ENST00000526204 Q6ZR03 302 aa17.79■□□□□ 0.44
VPS28-205ENST00000526204 VAX2Q9UIW0 290 aa17.79■□□□□ 0.44
VPS28-205ENST00000526204 UBE2L5PA0A1B0GUS4 154 aa17.78■□□□□ 0.44
VPS28-205ENST00000526204 RPS10P46783 165 aaKnown RBP17.78■□□□□ 0.44
VPS28-205ENST00000526204 FABP6P51161 128 aa17.78■□□□□ 0.44
VPS28-205ENST00000526204 PAX5Q02548 391 aa17.78■□□□□ 0.44
VPS28-205ENST00000526204 FAM90A2PQ658T7 463 aa17.78■□□□□ 0.44
VPS28-205ENST00000526204 OR8G2PQ6IF36 304 aa17.78■□□□□ 0.44
VPS28-205ENST00000526204 C5orf30Q96GV9 206 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms