RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 GSTT2BP0CG30 244 aa13.8□□□□□ -0.2
LMX1B-203ENST00000526117 SAA2P0DJI9 122 aaPredicted RBP13.8□□□□□ -0.2
LMX1B-203ENST00000526117 CBX5P45973 191 aa13.8□□□□□ -0.2
LMX1B-203ENST00000526117 PROK1P58294 105 aa13.8□□□□□ -0.2
LMX1B-203ENST00000526117 Q8N6K4 173 aa13.8□□□□□ -0.2
LMX1B-203ENST00000526117 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.8□□□□□ -0.2
LMX1B-203ENST00000526117 OR10J5Q8NHC4 309 aa13.8□□□□□ -0.2
LMX1B-203ENST00000526117 CAPSLQ8WWF8 208 aa13.8□□□□□ -0.2
LMX1B-203ENST00000526117 ZNF251Q9BRH9 671 aa13.8□□□□□ -0.2
LMX1B-203ENST00000526117 SLC25A33Q9BSK2 321 aa13.8□□□□□ -0.2
LMX1B-203ENST00000526117 C11orf54Q9H0W9 315 aaPredicted RBP13.8□□□□□ -0.2
LMX1B-203ENST00000526117 RDH8Q9NYR8 311 aa13.8□□□□□ -0.2
LMX1B-203ENST00000526117 FGF16O43320 207 aa13.79□□□□□ -0.2
LMX1B-203ENST00000526117 LSAMPQ13449 338 aa13.79□□□□□ -0.2
LMX1B-203ENST00000526117 SPCS2Q15005 226 aa13.79□□□□□ -0.2
LMX1B-203ENST00000526117 IGSF11Q5DX21 431 aa13.79□□□□□ -0.2
LMX1B-203ENST00000526117 TMEM69Q5SWH9 247 aa13.79□□□□□ -0.2
LMX1B-203ENST00000526117 CNIH2Q6PI25 160 aa13.79□□□□□ -0.2
LMX1B-203ENST00000526117 MOB3BQ86TA1 216 aa13.79□□□□□ -0.2
LMX1B-203ENST00000526117 C3orf56Q8N813 242 aa13.79□□□□□ -0.2
LMX1B-203ENST00000526117 OR8H1Q8NGG4 311 aa13.79□□□□□ -0.2
LMX1B-203ENST00000526117 WFDC12Q8WWY7 111 aa13.79□□□□□ -0.2
LMX1B-203ENST00000526117 TAF15Q92804 592 aaKnown RBP eCLIP13.79□□□□□ -0.2
LMX1B-203ENST00000526117 S1PR3Q99500 378 aa13.79□□□□□ -0.2
LMX1B-203ENST00000526117 PRSS22Q9GZN4 317 aa13.79□□□□□ -0.2
LMX1B-203ENST00000526117 PARP12Q9H0J9 701 aaKnown RBP13.79□□□□□ -0.2
LMX1B-203ENST00000526117 ZNF702PQ9H963 129 aa13.79□□□□□ -0.2
LMX1B-203ENST00000526117 CCDC59Q9P031 241 aaKnown RBP13.79□□□□□ -0.2
LMX1B-203ENST00000526117 COMMD3Q9UBI1 195 aa13.79□□□□□ -0.2
LMX1B-203ENST00000526117 ANXA10Q9UJ72 324 aa13.79□□□□□ -0.2
LMX1B-203ENST00000526117 ANAPC10Q9UM13 185 aa13.79□□□□□ -0.2
LMX1B-203ENST00000526117 MOB4Q9Y3A3 225 aa13.79□□□□□ -0.2
LMX1B-203ENST00000526117 RNF114Q9Y508 228 aa13.79□□□□□ -0.2
LMX1B-203ENST00000526117 IGKV1D-8A0A087WSZ0 117 aa13.78□□□□□ -0.2
LMX1B-203ENST00000526117 ST8SIA5O15466 376 aa13.78□□□□□ -0.2
LMX1B-203ENST00000526117 NOL3O60936 208 aaKnown RBP13.78□□□□□ -0.2
LMX1B-203ENST00000526117 IGKV1D-33P01593 117 aa13.78□□□□□ -0.2
LMX1B-203ENST00000526117 IGKV1-33P01594 117 aa13.78□□□□□ -0.2
LMX1B-203ENST00000526117 EIF4EP06730 217 aaKnown RBP13.78□□□□□ -0.2
LMX1B-203ENST00000526117 CD24P25063 80 aa13.78□□□□□ -0.2
LMX1B-203ENST00000526117 SOX6P35712 828 aa13.78□□□□□ -0.2
LMX1B-203ENST00000526117 REG1BP48304 166 aa13.78□□□□□ -0.2
LMX1B-203ENST00000526117 TAS2R20P59543 309 aa13.78□□□□□ -0.2
LMX1B-203ENST00000526117 FBLN7Q53RD9 439 aa13.78□□□□□ -0.2
LMX1B-203ENST00000526117 SHISA2Q6UWI4 295 aa13.78□□□□□ -0.2
LMX1B-203ENST00000526117 HOGA1Q86XE5 327 aa13.78□□□□□ -0.2
LMX1B-203ENST00000526117 H1FOOQ8IZA3 346 aaPredicted RBP13.78□□□□□ -0.2
LMX1B-203ENST00000526117 OR2T10Q8NGZ9 312 aa13.78□□□□□ -0.2
LMX1B-203ENST00000526117 OR2T6Q8NHC8 308 aa13.78□□□□□ -0.2
LMX1B-203ENST00000526117 DYNC2LI1Q8TCX1 351 aa13.78□□□□□ -0.2
LMX1B-203ENST00000526117 ISOC1Q96CN7 298 aa13.78□□□□□ -0.2
LMX1B-203ENST00000526117 NABP2Q9BQ15 211 aa13.78□□□□□ -0.2
LMX1B-203ENST00000526117 H3BMQ9 156 aa13.77□□□□□ -0.21
LMX1B-203ENST00000526117 BET1O15155 118 aa13.77□□□□□ -0.21
LMX1B-203ENST00000526117 MOSP00540 346 aa13.77□□□□□ -0.21
LMX1B-203ENST00000526117 AMY1AP04745 511 aa13.77□□□□□ -0.21
LMX1B-203ENST00000526117 AMY2AP04746 511 aa13.77□□□□□ -0.21
LMX1B-203ENST00000526117 TMEM11P17152 192 aa13.77□□□□□ -0.21
LMX1B-203ENST00000526117 MAFIPQ8WZ33 124 aa13.77□□□□□ -0.21
LMX1B-203ENST00000526117 EAF1Q96JC9 268 aaPredicted RBP13.77□□□□□ -0.21
LMX1B-203ENST00000526117 ST6GALNAC5Q9BVH7 336 aa13.77□□□□□ -0.21
LMX1B-203ENST00000526117 ADAM30Q9UKF2 790 aa13.77□□□□□ -0.21
LMX1B-203ENST00000526117 CEPT1Q9Y6K0 416 aa13.77□□□□□ -0.21
LMX1B-203ENST00000526117 FBN3Q75N90 2809 aa13.76□□□□□ -0.21
LMX1B-203ENST00000526117 SMIM31A0A1B0GVY4 71 aa13.76□□□□□ -0.21
LMX1B-203ENST00000526117 OR5H14A6NHG9 310 aa13.76□□□□□ -0.21
LMX1B-203ENST00000526117 ZNF701M0R085 212 aaPredicted RBP13.76□□□□□ -0.21
LMX1B-203ENST00000526117 HLA-DQB1P01920 261 aa13.76□□□□□ -0.21
LMX1B-203ENST00000526117 ELK1P19419 428 aa13.76□□□□□ -0.21
LMX1B-203ENST00000526117 OR3A3P47888 321 aa13.76□□□□□ -0.21
LMX1B-203ENST00000526117 BEST4Q8NFU0 473 aa13.76□□□□□ -0.21
LMX1B-203ENST00000526117 GINS4Q9BRT9 223 aa13.76□□□□□ -0.21
LMX1B-203ENST00000526117 MRPL20Q9BYC9 149 aaKnown RBP13.76□□□□□ -0.21
LMX1B-203ENST00000526117 ZNF221Q9UK13 617 aa13.76□□□□□ -0.21
LMX1B-203ENST00000526117 HPGDSO60760 199 aa13.75□□□□□ -0.21
LMX1B-203ENST00000526117 NAT1P18440 290 aa13.75□□□□□ -0.21
LMX1B-203ENST00000526117 MC5RP33032 325 aa13.75□□□□□ -0.21
LMX1B-203ENST00000526117 BLCAPP62952 87 aa13.75□□□□□ -0.21
LMX1B-203ENST00000526117 HES1Q14469 280 aa13.75□□□□□ -0.21
LMX1B-203ENST00000526117 C5orf56Q8N8D9 126 aa13.75□□□□□ -0.21
LMX1B-203ENST00000526117 ABHD14BQ96IU4 210 aa13.75□□□□□ -0.21
LMX1B-203ENST00000526117 CITED1Q99966 193 aa13.75□□□□□ -0.21
LMX1B-203ENST00000526117 RBM38Q9H0Z9 239 aaKnown RBP13.75□□□□□ -0.21
LMX1B-203ENST00000526117 SCPEP1Q9HB40 452 aa13.75□□□□□ -0.21
LMX1B-203ENST00000526117 SERTAD4Q9NUC0 356 aa13.75□□□□□ -0.21
LMX1B-203ENST00000526117 IGHV3-72A0A0B4J1Y9 119 aa13.74□□□□□ -0.21
LMX1B-203ENST00000526117 SULT1C2O00338 296 aa13.74□□□□□ -0.21
LMX1B-203ENST00000526117 PROP1O75360 226 aa13.74□□□□□ -0.21
LMX1B-203ENST00000526117 TUSC2O75896 110 aa13.74□□□□□ -0.21
LMX1B-203ENST00000526117 SLC22A5O76082 557 aa13.74□□□□□ -0.21
LMX1B-203ENST00000526117 CT45A6P0DMU7 189 aa13.74□□□□□ -0.21
LMX1B-203ENST00000526117 CT45A5P0DMU8 189 aa13.74□□□□□ -0.21
LMX1B-203ENST00000526117 CT45A7P0DMV0 189 aa13.74□□□□□ -0.21
LMX1B-203ENST00000526117 PRSS3P35030 304 aa13.74□□□□□ -0.21
LMX1B-203ENST00000526117 OR5AN1Q8NGI8 311 aa13.74□□□□□ -0.21
LMX1B-203ENST00000526117 WIPF2Q8TF74 440 aaPredicted RBP13.74□□□□□ -0.21
LMX1B-203ENST00000526117 C15orf40Q8WUR7 153 aa13.74□□□□□ -0.21
LMX1B-203ENST00000526117 SNAPC3Q92966 411 aa13.74□□□□□ -0.21
LMX1B-203ENST00000526117 WNT10AQ9GZT5 417 aa13.74□□□□□ -0.21
LMX1B-203ENST00000526117 PLSCR3Q9NRY6 295 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms