RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 PLPP3O14495 311 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 NKG7Q16617 165 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 CADM4Q8NFZ8 388 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 TRAV8-4A0A0B4J246 113 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 C9JCJ5 164 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 PAX2Q02962 417 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 PRICKLE4Q2TBC4 344 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 MAJINQ3KP22 176 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 CHODLQ9H9P2 273 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 SLC6A13Q9NSD5 602 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 TMEM106BQ9NUM4 274 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 SLC25A20O43772 301 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 TMEM50AO95807 157 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 SAA1P0DJI8 122 aaPredicted RBP11.93□□□□□ -0.5
LRRK1-202ENST00000525284 ZNF714Q96N38 554 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 GGACTQ9BVM4 153 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 CCL27Q9Y4X3 112 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 H0YL77 283 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 SSPNQ14714 243 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 ANKRD33Q7Z3H0 272 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 AMER3Q8N944 861 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 NEUROG1Q92886 237 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 FGF14Q92915 247 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 DUX5Q96PT3 197 aa11.93□□□□□ -0.5
LRRK1-202ENST00000525284 IGKV3D-20A0A0C4DH25 116 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 DPRXA6NFQ7 191 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 NPIPB8E9PQR5 432 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 NPIPB9F8W1W9 429 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 CTDSPLO15194 276 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 NPIPB7O75200 414 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 AGAP20933 346 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 FCARP24071 287 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 CNTFRP26992 372 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 PAPPA-AS1Q5QFB9 102 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 AKAP11Q9UKA4 1901 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 ATXN7O15265 892 aaPredicted RBP11.92□□□□□ -0.5
LRRK1-202ENST00000525284 PUSL1Q8N0Z8 303 aaKnown RBP11.92□□□□□ -0.5
LRRK1-202ENST00000525284 PTP4A1Q93096 173 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 MRM2Q9UI43 246 aaKnown RBP11.92□□□□□ -0.5
LRRK1-202ENST00000525284 RPS20P60866 119 aaKnown RBP11.92□□□□□ -0.5
LRRK1-202ENST00000525284 CFDP00746 253 aaPredicted RBP11.92□□□□□ -0.5
LRRK1-202ENST00000525284 PNLIPP16233 465 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 HOXA5P20719 270 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 C3AR1Q16581 482 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 C1QTNF12Q5T7M4 302 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 OR2K2Q8NGT1 345 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 R4GN57 208 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 PRRT4C9JH25 899 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 H3BUT2 72 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 C1QL1O75973 258 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 TRGC1P0CF51 173 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 TMEM211Q6ICI0 200 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 SLC25A10Q9UBX3 287 aaPredicted RBP11.92□□□□□ -0.5
LRRK1-202ENST00000525284 TNFSF18Q9UNG2 199 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 CRYBG1Q9Y4K1 1723 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 NDUFA3O95167 84 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 LCN2P80188 198 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 STPG3Q8N7X2 389 aa11.92□□□□□ -0.5
LRRK1-202ENST00000525284 IGLV3-10A0A075B6K4 115 aa11.91□□□□□ -0.5
LRRK1-202ENST00000525284 SLC17A3O00476 420 aa11.91□□□□□ -0.5
LRRK1-202ENST00000525284 OR52M1Q8NGK5 317 aa11.91□□□□□ -0.5
LRRK1-202ENST00000525284 MEF2BQ02080 365 aaPredicted RBP11.91□□□□□ -0.5
LRRK1-202ENST00000525284 C16orf47Q6ZP98 133 aaPredicted RBP11.91□□□□□ -0.5
LRRK1-202ENST00000525284 ZNF48Q96MX3 618 aaPredicted RBP11.91□□□□□ -0.5
LRRK1-202ENST00000525284 ZBP1Q9H171 429 aa11.91□□□□□ -0.5
LRRK1-202ENST00000525284 OR5AC2Q9NZP5 309 aa11.91□□□□□ -0.5
LRRK1-202ENST00000525284 ALS2Q96Q42 1657 aa11.91□□□□□ -0.5
LRRK1-202ENST00000525284 MIC13Q5XKP0 118 aa11.91□□□□□ -0.5
LRRK1-202ENST00000525284 FLRT3Q9NZU0 649 aa11.91□□□□□ -0.5
LRRK1-202ENST00000525284 SERF2P84101 59 aa11.91□□□□□ -0.5
LRRK1-202ENST00000525284 ZNF562Q6V9R5 426 aa11.91□□□□□ -0.5
LRRK1-202ENST00000525284 LINC00518Q8N0U6 118 aa11.91□□□□□ -0.5
LRRK1-202ENST00000525284 SSBP4Q9BWG4 385 aaPredicted RBP11.91□□□□□ -0.5
LRRK1-202ENST00000525284 SSBP3Q9BWW4 388 aaPredicted RBP11.91□□□□□ -0.5
LRRK1-202ENST00000525284 FNDC4Q9H6D8 234 aaPredicted RBP11.91□□□□□ -0.5
LRRK1-202ENST00000525284 NXT2Q9NPJ8 142 aaKnown RBP11.91□□□□□ -0.5
LRRK1-202ENST00000525284 FSCN3Q9NQT6 498 aa11.91□□□□□ -0.5
LRRK1-202ENST00000525284 CLDN14O95500 239 aa11.91□□□□□ -0.5
LRRK1-202ENST00000525284 SLC25A53Q5H9E4 307 aa11.91□□□□□ -0.5
LRRK1-202ENST00000525284 EDA2RQ9HAV5 297 aa11.91□□□□□ -0.5
LRRK1-202ENST00000525284 V9GYH0 126 aa11.91□□□□□ -0.5
LRRK1-202ENST00000525284 PRR32B1ATL7 298 aa11.9□□□□□ -0.5
LRRK1-202ENST00000525284 ZIC3O60481 467 aa11.9□□□□□ -0.5
LRRK1-202ENST00000525284 COL10A1Q03692 680 aa11.9□□□□□ -0.5
LRRK1-202ENST00000525284 C2orf88Q9BSF0 95 aa11.9□□□□□ -0.5
LRRK1-202ENST00000525284 SFTPCP11686 197 aa11.9□□□□□ -0.5
LRRK1-202ENST00000525284 TDGF1P13385 188 aa11.9□□□□□ -0.5
LRRK1-202ENST00000525284 RPL27AP46776 148 aaKnown RBP11.9□□□□□ -0.5
LRRK1-202ENST00000525284 HIST1H4AP62805 103 aaKnown RBP11.9□□□□□ -0.5
LRRK1-202ENST00000525284 MESTQ5EB52 335 aa11.9□□□□□ -0.5
LRRK1-202ENST00000525284 FAM219BQ5XKK7 198 aa11.9□□□□□ -0.5
LRRK1-202ENST00000525284 NFAM1Q8NET5 270 aaPredicted RBP11.9□□□□□ -0.5
LRRK1-202ENST00000525284 ASB10Q8WXI3 467 aa11.9□□□□□ -0.5
LRRK1-202ENST00000525284 ELSPBP1Q96BH3 223 aa11.9□□□□□ -0.5
LRRK1-202ENST00000525284 QTRT1Q9BXR0 403 aaKnown RBP11.9□□□□□ -0.5
LRRK1-202ENST00000525284 ITGB4P16144 1822 aa11.9□□□□□ -0.5
LRRK1-202ENST00000525284 NOVP48745 357 aa11.9□□□□□ -0.5
LRRK1-202ENST00000525284 EFNB2P52799 333 aa11.9□□□□□ -0.5
LRRK1-202ENST00000525284 SIGMAR1Q99720 223 aa11.9□□□□□ -0.5
LRRK1-202ENST00000525284 TRPM3Q9HCF6 1732 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms