RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 UPRTQ96BW1 309 aa12.91□□□□□ -0.34
TSPAN4-213ENST00000524895 ABHD14BQ96IU4 210 aa12.91□□□□□ -0.34
TSPAN4-213ENST00000524895 AGMATQ9BSE5 352 aa12.91□□□□□ -0.34
TSPAN4-213ENST00000524895 C20orf85Q9H1P6 137 aa12.91□□□□□ -0.34
TSPAN4-213ENST00000524895 MMP28Q9H239 520 aa12.91□□□□□ -0.34
TSPAN4-213ENST00000524895 OCEL1Q9H607 264 aa12.91□□□□□ -0.34
TSPAN4-213ENST00000524895 ZNRD1Q9P1U0 126 aa12.91□□□□□ -0.34
TSPAN4-213ENST00000524895 C14orf166Q9Y224 244 aaKnown RBP12.91□□□□□ -0.34
TSPAN4-213ENST00000524895 AMMECR1Q9Y4X0 333 aaPredicted RBP12.91□□□□□ -0.34
TSPAN4-213ENST00000524895 TRAV40A0A0B4J280 105 aa12.9□□□□□ -0.34
TSPAN4-213ENST00000524895 HSD17B6O14756 317 aa12.9□□□□□ -0.34
TSPAN4-213ENST00000524895 SLC22A5O76082 557 aa12.9□□□□□ -0.34
TSPAN4-213ENST00000524895 TCRBP04435 133 aa12.9□□□□□ -0.34
TSPAN4-213ENST00000524895 RLN1P04808 185 aa12.9□□□□□ -0.34
TSPAN4-213ENST00000524895 IL3RAP26951 378 aa12.9□□□□□ -0.34
TSPAN4-213ENST00000524895 UBE2E1P51965 193 aa12.9□□□□□ -0.34
TSPAN4-213ENST00000524895 HLA-DRB5Q30154 266 aa12.9□□□□□ -0.34
TSPAN4-213ENST00000524895 TRIM16LQ309B1 348 aa12.9□□□□□ -0.34
TSPAN4-213ENST00000524895 ABCA11PQ4W5N1 156 aa12.9□□□□□ -0.34
TSPAN4-213ENST00000524895 ZNF626Q68DY1 528 aa12.9□□□□□ -0.34
TSPAN4-213ENST00000524895 PLET1Q6UQ28 207 aa12.9□□□□□ -0.34
TSPAN4-213ENST00000524895 ZDHHC22Q8N966 263 aa12.9□□□□□ -0.34
TSPAN4-213ENST00000524895 GHITMQ9H3K2 345 aa12.9□□□□□ -0.34
TSPAN4-213ENST00000524895 CCL28Q9NRJ3 127 aa12.9□□□□□ -0.34
TSPAN4-213ENST00000524895 NUDT15Q9NV35 164 aa12.9□□□□□ -0.34
TSPAN4-213ENST00000524895 PIPOXQ9P0Z9 390 aa12.9□□□□□ -0.34
TSPAN4-213ENST00000524895 VSIG4Q9Y279 399 aa12.9□□□□□ -0.34
TSPAN4-213ENST00000524895 NUBP2Q9Y5Y2 271 aa12.9□□□□□ -0.34
TSPAN4-213ENST00000524895 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.89□□□□□ -0.352e-9■■■■□ 23
TSPAN4-213ENST00000524895 TRAV6A0A075B6T7 132 aa12.89□□□□□ -0.35
TSPAN4-213ENST00000524895 SAA2-SAA4A0A096LPE2 208 aa12.89□□□□□ -0.35
TSPAN4-213ENST00000524895 A0A1W2PRD5 423 aa12.89□□□□□ -0.35
TSPAN4-213ENST00000524895 A0A1W2PRF3 423 aa12.89□□□□□ -0.35
TSPAN4-213ENST00000524895 A0A1W2PRM7 423 aa12.89□□□□□ -0.35
TSPAN4-213ENST00000524895 ODF3BA8MYP8 253 aa12.89□□□□□ -0.35
TSPAN4-213ENST00000524895 GPR31O00270 319 aa12.89□□□□□ -0.35
TSPAN4-213ENST00000524895 RAB29O14966 203 aa12.89□□□□□ -0.35
TSPAN4-213ENST00000524895 ARPC1BO15143 372 aaKnown RBP12.89□□□□□ -0.35
TSPAN4-213ENST00000524895 CD5LO43866 347 aa12.89□□□□□ -0.35
TSPAN4-213ENST00000524895 IGLV1-47P01700 117 aa12.89□□□□□ -0.35
TSPAN4-213ENST00000524895 CTSDP07339 412 aaPredicted RBP12.89□□□□□ -0.35
TSPAN4-213ENST00000524895 SAA2P0DJI9 122 aaPredicted RBP12.89□□□□□ -0.35
TSPAN4-213ENST00000524895 SPNP16150 400 aa12.89□□□□□ -0.35
TSPAN4-213ENST00000524895 PI3P19957 117 aa12.89□□□□□ -0.35
TSPAN4-213ENST00000524895 GPR157Q5UAW9 335 aa12.89□□□□□ -0.35
TSPAN4-213ENST00000524895 ZNF818PQ6ZRF7 136 aa12.89□□□□□ -0.35
TSPAN4-213ENST00000524895 TMED4Q7Z7H5 227 aa12.89□□□□□ -0.35
TSPAN4-213ENST00000524895 CMTM1Q8IZ96 169 aa12.89□□□□□ -0.35
TSPAN4-213ENST00000524895 DUSP18Q8NEJ0 188 aa12.89□□□□□ -0.35
TSPAN4-213ENST00000524895 OR4P4Q8NGL7 312 aa12.89□□□□□ -0.35
TSPAN4-213ENST00000524895 CREB3L1Q96BA8 519 aa12.89□□□□□ -0.35
TSPAN4-213ENST00000524895 ZNF486Q96H40 463 aaPredicted RBP12.89□□□□□ -0.35
TSPAN4-213ENST00000524895 RSRP1Q9BUV0 290 aa12.89□□□□□ -0.35
TSPAN4-213ENST00000524895 GPR132Q9UNW8 380 aa12.89□□□□□ -0.35
TSPAN4-213ENST00000524895 MED13LQ71F56 2210 aa12.89□□□□□ -0.35
TSPAN4-213ENST00000524895 CENPVL3A0A0U1RRI6 287 aa12.88□□□□□ -0.35
TSPAN4-213ENST00000524895 S100GP29377 79 aa12.88□□□□□ -0.35
TSPAN4-213ENST00000524895 GNRHRP30968 328 aa12.88□□□□□ -0.35
TSPAN4-213ENST00000524895 LGALS4P56470 323 aa12.88□□□□□ -0.35
TSPAN4-213ENST00000524895 KRTAP1-1Q07627 177 aa12.88□□□□□ -0.35
TSPAN4-213ENST00000524895 MSMO1Q15800 293 aa12.88□□□□□ -0.35
TSPAN4-213ENST00000524895 PHLDA2Q53GA4 152 aa12.88□□□□□ -0.35
TSPAN4-213ENST00000524895 CENPSQ8N2Z9 138 aa12.88□□□□□ -0.35
TSPAN4-213ENST00000524895 DRAM1Q8N682 238 aa12.88□□□□□ -0.35
TSPAN4-213ENST00000524895 MINDY2Q8NBR6 621 aa12.88□□□□□ -0.35
TSPAN4-213ENST00000524895 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.88□□□□□ -0.35
TSPAN4-213ENST00000524895 AKR1E2Q96JD6 320 aa12.88□□□□□ -0.35
TSPAN4-213ENST00000524895 S1PR3Q99500 378 aa12.88□□□□□ -0.35
TSPAN4-213ENST00000524895 C5orf66Q9H5L9 145 aa12.88□□□□□ -0.35
TSPAN4-213ENST00000524895 SDHAF2Q9NX18 166 aa12.88□□□□□ -0.35
TSPAN4-213ENST00000524895 FLVCR2Q9UPI3 526 aa12.88□□□□□ -0.35
TSPAN4-213ENST00000524895 IGHV3OR16-10A0A075B7F0 116 aa12.87□□□□□ -0.35
TSPAN4-213ENST00000524895 IGHV1-69DA0A0B4J2H0 117 aa12.87□□□□□ -0.35
TSPAN4-213ENST00000524895 BUB1B-PAK6H3BSN5 160 aa12.87□□□□□ -0.35
TSPAN4-213ENST00000524895 TNFSF12O43508 249 aa12.87□□□□□ -0.35
TSPAN4-213ENST00000524895 AVPP01185 164 aa12.87□□□□□ -0.35
TSPAN4-213ENST00000524895 IGHV1-69P01742 117 aa12.87□□□□□ -0.35
TSPAN4-213ENST00000524895 H2AFB2P0C5Z0 115 aa12.87□□□□□ -0.35
TSPAN4-213ENST00000524895 HTR1DP28221 377 aa12.87□□□□□ -0.35
TSPAN4-213ENST00000524895 CEACAM3P40198 252 aa12.87□□□□□ -0.35
TSPAN4-213ENST00000524895 OXA1LQ15070 435 aa12.87□□□□□ -0.35
TSPAN4-213ENST00000524895 RPL39P5Q59GN2 51 aa12.87□□□□□ -0.35
TSPAN4-213ENST00000524895 CCBE1Q6UXH8 406 aaPredicted RBP12.87□□□□□ -0.35
TSPAN4-213ENST00000524895 ODF3L1Q8IXM7 274 aa12.87□□□□□ -0.35
TSPAN4-213ENST00000524895 CCDC71LQ8N9Z2 235 aa12.87□□□□□ -0.35
TSPAN4-213ENST00000524895 ZBTB34Q8NCN2 500 aa12.87□□□□□ -0.35
TSPAN4-213ENST00000524895 BVESQ8NE79 360 aa12.87□□□□□ -0.35
TSPAN4-213ENST00000524895 CHPT1Q8WUD6 406 aa12.87□□□□□ -0.35
TSPAN4-213ENST00000524895 SLC2A9Q9NRM0 540 aa12.87□□□□□ -0.35
TSPAN4-213ENST00000524895 ZANQ9Y493 2812 aa12.87□□□□□ -0.35
TSPAN4-213ENST00000524895 TEX15Q9BXT5 2789 aa12.86□□□□□ -0.35
TSPAN4-213ENST00000524895 LEUTXA8MZ59 168 aa12.86□□□□□ -0.35
TSPAN4-213ENST00000524895 M0R1X1 148 aa12.86□□□□□ -0.35
TSPAN4-213ENST00000524895 NPFFO15130 113 aa12.86□□□□□ -0.35
TSPAN4-213ENST00000524895 IGLV2-14P01704 120 aa12.86□□□□□ -0.35
TSPAN4-213ENST00000524895 IGHV4-38-2P0DP08 117 aa12.86□□□□□ -0.35
TSPAN4-213ENST00000524895 CD99P14209 185 aa12.86□□□□□ -0.35
TSPAN4-213ENST00000524895 PIGPP57054 158 aa12.86□□□□□ -0.35
TSPAN4-213ENST00000524895 TAS2R31P59538 309 aa12.86□□□□□ -0.35
TSPAN4-213ENST00000524895 MIDNQ504T8 468 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms