RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	OPA3	Q9H6K4	179 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	DEPP	Q9NTK1	212 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	PARPBP	Q9NWS1	579 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	RNF115	Q9Y4L5	304 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	LIPG	Q9Y5X9	500 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	PUS1	Q9Y606	427 aa	Known RBP eCLIP	6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	NIPBL	Q6KC79	2804 aa	eCLIP	6.63	□□□□□ -1.35	5e-6	■■■■■ 32.2
SPIDR-223	ENST00000524033	IGKV1D-13	A0A0B4J2D9	117 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	ZNF816-ZNF321P	A0A0X1KG74	233 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	SLC22A20	A6NK97	555 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	FAM166B	A8MTA8	275 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	ZNF727	A8MUV8	499 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033		B4DEV8	164 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033		G3V3Y1	287 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033		H0Y980	276 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	HSPA12A	O43301	675 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	ADAM20	O43506	726 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	NDUFS6	O75380	124 aa	Known RBP	6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	YIF1A	O95070	293 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	MMP7	P09237	267 aa	Predicted RBP	6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	IGKV1-13	P0DP09	117 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	RPS10	P46783	165 aa	Known RBP	6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	CLDN15	P56746	228 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	UBE2K	P61086	200 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	DLK1	P80370	383 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	PSG4	Q00888	419 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	PMS2P11	Q13670	270 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	HERPUD1	Q15011	391 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	RIPPLY2	Q5TAB7	128 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	ZNF343	Q6P1L6	599 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	ZNF880	Q6PDB4	577 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	SPNS3	Q6ZMD2	512 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	MEX3B	Q6ZN04	569 aa	Known RBP	6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	ZNF600	Q6ZNG1	722 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	CYB561D1	Q8N8Q1	229 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	OR2M7	Q8NG81	312 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	OR5D13	Q8NGL4	314 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	FGFBP3	Q8TAT2	258 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	MBD3L1	Q8WWY6	194 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	RND1	Q92730	232 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	ZNF845	Q96IR2	970 aa	Predicted RBP	6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	ADGRG7	Q96K78	797 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	SGCZ	Q96LD1	299 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	FAM173A	Q9BQD7	235 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	CABLES2	Q9BTV7	478 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	RBM24	Q9BX46	236 aa	Known RBP	6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	C1QTNF5	Q9BXJ0	243 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	PARD6G	Q9BYG4	376 aa	Predicted RBP	6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	OR2H1	Q9GZK4	316 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	PRDM13	Q9H4Q3	707 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	SLC7A10	Q9NS82	523 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	CISD1	Q9NZ45	108 aa	Known RBP	6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	TAAR3P	Q9P1P4	343 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	ST3GAL6	Q9Y274	331 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	WSB1	Q9Y6I7	421 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	RTTN	Q86VV8	2226 aa		6.62	□□□□□ -1.35
SPIDR-223	ENST00000524033	ZFHX3	Q15911	3703 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	IGKV1-6	A0A0C4DH72	117 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033		A0A0G2JRQ6	117 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	PINLYP	A6NC86	204 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	NPIPB11	E5RHQ5	1161 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	ZNF587B	E7ETH6	402 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	SSSCA1	O60232	199 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	HIST1H2BK	O60814	126 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	SS18L1	O75177	396 aa	Predicted RBP	6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	LCAT	P04180	440 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033		P04436	131 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	HIST1H2BJ	P06899	126 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	VDAC1	P21796	283 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	HIST1H2BO	P23527	126 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	CHRNB4	P30926	498 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	SRD5A2	P31213	254 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	HOXC12	P31275	282 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	HIST1H2BB	P33778	126 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	GPX4	P36969	197 aa	Predicted RBP	6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	TAGLN2	P37802	199 aa	Known RBP	6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	ASCL1	P50553	236 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	HIST1H2BD	P58876	126 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	RAC3	P60763	192 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	FGF12	P61328	243 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	HIST1H2BC	P62807	126 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	SLC10A1	Q14973	349 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	HIST2H2BE	Q16778	126 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	MPV17L	Q2QL34	196 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	CXorf66	Q5JRM2	361 aa	Predicted RBP	6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	AKR1C8P	Q5T2L2	129 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	RAET1L	Q5VY80	246 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	PLCXD3	Q63HM9	321 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	ZNF818P	Q6ZRF7	136 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	GGN	Q86UU5	652 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	ZNF429	Q86V71	674 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	CALHM1	Q8IU99	346 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	OR5C1	Q8NGR4	320 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	GTF3A	Q92664	365 aa	Known RBP	6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	HIST1H2BH	Q93079	126 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	CCDC140	Q96MF4	163 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	FOXB1	Q99853	325 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	HIST1H2BN	Q99877	126 aa		6.61	□□□□□ -1.35
SPIDR-223	ENST00000524033	HIST1H2BM	Q99879	126 aa		6.61	□□□□□ -1.35

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