RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 MFSD4AQ8N468 514 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 OR5H6Q8NGV6 325 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 OR2T6Q8NHC8 308 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 RTN4IP1Q8WWV3 396 aaPredicted RBP10.07□□□□□ -0.8
VEGFA-225ENST00000523950 ACOT12Q8WYK0 555 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 CFHR4Q92496 578 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 SLC25A38Q96DW6 304 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 CMTM3Q96MX0 182 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 FAM210AQ96ND0 272 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 RBM14Q96PK6 669 aaKnown RBP10.07□□□□□ -0.8
VEGFA-225ENST00000523950 TOLLIPQ9H0E2 274 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 ABCG5Q9H222 651 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 PIPOXQ9P0Z9 390 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 RNF114Q9Y508 228 aa10.07□□□□□ -0.8
VEGFA-225ENST00000523950 FABP7O15540 132 aa10.06□□□□□ -0.8
VEGFA-225ENST00000523950 HSPA12AO43301 675 aa10.06□□□□□ -0.8
VEGFA-225ENST00000523950 SCTP09683 121 aa10.06□□□□□ -0.8
VEGFA-225ENST00000523950 RORCP51449 518 aa10.06□□□□□ -0.8
VEGFA-225ENST00000523950 GNG2P59768 71 aa10.06□□□□□ -0.8
VEGFA-225ENST00000523950 EBI3Q14213 229 aa10.06□□□□□ -0.8
VEGFA-225ENST00000523950 FAM53AQ6NSI3 398 aaPredicted RBP10.06□□□□□ -0.8
VEGFA-225ENST00000523950 TMEM219Q86XT9 240 aa10.06□□□□□ -0.8
VEGFA-225ENST00000523950 Q8N2B8 174 aa10.06□□□□□ -0.8
VEGFA-225ENST00000523950 DRAM1Q8N682 238 aa10.06□□□□□ -0.8
VEGFA-225ENST00000523950 OR56B4Q8NH76 319 aa10.06□□□□□ -0.8
VEGFA-225ENST00000523950 AP3S1Q92572 193 aa10.06□□□□□ -0.8
VEGFA-225ENST00000523950 S100A16Q96FQ6 103 aaKnown RBP10.06□□□□□ -0.8
VEGFA-225ENST00000523950 SLC25A33Q9BSK2 321 aa10.06□□□□□ -0.8
VEGFA-225ENST00000523950 CABLES2Q9BTV7 478 aa10.06□□□□□ -0.8
VEGFA-225ENST00000523950 PRSS22Q9GZN4 317 aa10.06□□□□□ -0.8
VEGFA-225ENST00000523950 SLC23A1Q9UHI7 598 aa10.06□□□□□ -0.8
VEGFA-225ENST00000523950 RAB29O14966 203 aa10.05□□□□□ -0.8
VEGFA-225ENST00000523950 PTTG1O95997 202 aa10.05□□□□□ -0.8
VEGFA-225ENST00000523950 SNRNP70P08621 437 aaKnown RBP10.05□□□□□ -0.8
VEGFA-225ENST00000523950 CTXN2P0C2S0 81 aa10.05□□□□□ -0.8
VEGFA-225ENST00000523950 CD1BP29016 333 aa10.05□□□□□ -0.8
VEGFA-225ENST00000523950 PROK1P58294 105 aa10.05□□□□□ -0.8
VEGFA-225ENST00000523950 DEFA1P59665 94 aa10.05□□□□□ -0.8
VEGFA-225ENST00000523950 DEFA3P59666 94 aa10.05□□□□□ -0.8
VEGFA-225ENST00000523950 DIAPH2-AS1Q14236 149 aa10.05□□□□□ -0.8
VEGFA-225ENST00000523950 ZNF833PQ6ZTB9 187 aa10.05□□□□□ -0.8
VEGFA-225ENST00000523950 C5orf24Q7Z6I8 188 aa10.05□□□□□ -0.8
VEGFA-225ENST00000523950 MOB3BQ86TA1 216 aa10.05□□□□□ -0.8
VEGFA-225ENST00000523950 ODF3L1Q8IXM7 274 aa10.05□□□□□ -0.8
VEGFA-225ENST00000523950 WFDC12Q8WWY7 111 aa10.05□□□□□ -0.8
VEGFA-225ENST00000523950 TAF15Q92804 592 aaKnown RBP eCLIP10.05□□□□□ -0.8
VEGFA-225ENST00000523950 CCDC32Q9BV29 185 aa10.05□□□□□ -0.8
VEGFA-225ENST00000523950 IFI27L2Q9H2X8 130 aa10.05□□□□□ -0.8
VEGFA-225ENST00000523950 TRAV18A0A075B6X5 111 aa10.04□□□□□ -0.8
VEGFA-225ENST00000523950 TRBV6-7A0A0A0MS04 114 aa10.04□□□□□ -0.8
VEGFA-225ENST00000523950 IGKV1-6A0A0C4DH72 117 aa10.04□□□□□ -0.8
VEGFA-225ENST00000523950 TMEM235A6NFC5 223 aa10.04□□□□□ -0.8
VEGFA-225ENST00000523950 J3QRK9 145 aa10.04□□□□□ -0.8
VEGFA-225ENST00000523950 FGF16O43320 207 aa10.04□□□□□ -0.8
VEGFA-225ENST00000523950 XRCC3O43542 346 aa10.04□□□□□ -0.8
VEGFA-225ENST00000523950 UPK1BO75841 260 aa10.04□□□□□ -0.8
VEGFA-225ENST00000523950 IGKV1D-33P01593 117 aa10.04□□□□□ -0.8
VEGFA-225ENST00000523950 IGKV1-33P01594 117 aa10.04□□□□□ -0.8
VEGFA-225ENST00000523950 TMEM11P17152 192 aa10.04□□□□□ -0.8
VEGFA-225ENST00000523950 CD24P25063 80 aa10.04□□□□□ -0.8
VEGFA-225ENST00000523950 CEACAM6P40199 344 aa10.04□□□□□ -0.8
VEGFA-225ENST00000523950 REG1BP48304 166 aa10.04□□□□□ -0.8
VEGFA-225ENST00000523950 HES1Q14469 280 aa10.04□□□□□ -0.8
VEGFA-225ENST00000523950 SAMD12Q8N8I0 201 aa10.04□□□□□ -0.8
VEGFA-225ENST00000523950 OR8H1Q8NGG4 311 aa10.04□□□□□ -0.8
VEGFA-225ENST00000523950 OR2T10Q8NGZ9 312 aa10.04□□□□□ -0.8
VEGFA-225ENST00000523950 OR10J5Q8NHC4 309 aa10.04□□□□□ -0.8
VEGFA-225ENST00000523950 S1PR3Q99500 378 aa10.04□□□□□ -0.8
VEGFA-225ENST00000523950 ZNF702PQ9H963 129 aa10.04□□□□□ -0.8
VEGFA-225ENST00000523950 OR1A1Q9P1Q5 309 aa10.04□□□□□ -0.8
VEGFA-225ENST00000523950 MOB4Q9Y3A3 225 aa10.04□□□□□ -0.8
VEGFA-225ENST00000523950 hCG_2014768A0A024R1R8 64 aa10.03□□□□□ -0.8
VEGFA-225ENST00000523950 SAA2-SAA4A0A096LPE2 208 aa10.03□□□□□ -0.8
VEGFA-225ENST00000523950 HAX1O00165 279 aa10.03□□□□□ -0.8
VEGFA-225ENST00000523950 ST8SIA5O15466 376 aa10.03□□□□□ -0.8
VEGFA-225ENST00000523950 APOA1P02647 267 aa10.03□□□□□ -0.8
VEGFA-225ENST00000523950 GSTT2P0CG29 244 aa10.03□□□□□ -0.8
VEGFA-225ENST00000523950 GSTT2BP0CG30 244 aa10.03□□□□□ -0.8
VEGFA-225ENST00000523950 SAA2P0DJI9 122 aaPredicted RBP10.03□□□□□ -0.8
VEGFA-225ENST00000523950 CBX5P45973 191 aa10.03□□□□□ -0.8
VEGFA-225ENST00000523950 HERPUD1Q15011 391 aa10.03□□□□□ -0.8
VEGFA-225ENST00000523950 SPANXN2Q5MJ10 180 aa10.03□□□□□ -0.8
VEGFA-225ENST00000523950 MZT2AQ6P582 158 aa10.03□□□□□ -0.8
VEGFA-225ENST00000523950 NUDCD2Q8WVJ2 157 aa10.03□□□□□ -0.8
VEGFA-225ENST00000523950 AGMATQ9BSE5 352 aa10.03□□□□□ -0.8
VEGFA-225ENST00000523950 C11orf54Q9H0W9 315 aaPredicted RBP10.03□□□□□ -0.8
VEGFA-225ENST00000523950 AUNIPQ9H7T9 357 aa10.03□□□□□ -0.8
VEGFA-225ENST00000523950 RDH8Q9NYR8 311 aa10.03□□□□□ -0.8
VEGFA-225ENST00000523950 ZNF230Q9UIE0 474 aaPredicted RBP10.03□□□□□ -0.8
VEGFA-225ENST00000523950 GAB2Q9UQC2 676 aa10.03□□□□□ -0.8
VEGFA-225ENST00000523950 ANK2Q01484 3957 aa10.03□□□□□ -0.8
VEGFA-225ENST00000523950 DNHD1Q96M86 4753 aa10.02□□□□□ -0.81
VEGFA-225ENST00000523950 MOSP00540 346 aa10.02□□□□□ -0.81
VEGFA-225ENST00000523950 IGSF11Q5DX21 431 aa10.02□□□□□ -0.81
VEGFA-225ENST00000523950 TMEM69Q5SWH9 247 aa10.02□□□□□ -0.81
VEGFA-225ENST00000523950 CNIH2Q6PI25 160 aa10.02□□□□□ -0.81
VEGFA-225ENST00000523950 Q8N6K4 173 aa10.02□□□□□ -0.81
VEGFA-225ENST00000523950 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.02□□□□□ -0.81
VEGFA-225ENST00000523950 CHAC2Q8WUX2 184 aa10.02□□□□□ -0.81
VEGFA-225ENST00000523950 EAF1Q96JC9 268 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms