RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 IFI27L2Q9H2X8 130 aa13.62□□□□□ -0.23
CCNC-213ENST00000523541 STUB1Q9UNE7 303 aa13.62□□□□□ -0.23
CCNC-213ENST00000523541 TRDCB7Z8K6 153 aa13.61□□□□□ -0.23
CCNC-213ENST00000523541 HSPA12AO43301 675 aa13.61□□□□□ -0.23
CCNC-213ENST00000523541 DUS4LO95620 317 aaKnown RBP13.61□□□□□ -0.23
CCNC-213ENST00000523541 IGF1P05019 195 aa13.61□□□□□ -0.23
CCNC-213ENST00000523541 OR5H8P0DN80 308 aa13.61□□□□□ -0.23
CCNC-213ENST00000523541 PSMB9P28065 219 aa13.61□□□□□ -0.23
CCNC-213ENST00000523541 CEACAM6P40199 344 aa13.61□□□□□ -0.23
CCNC-213ENST00000523541 PLAC9Q5JTB6 97 aa13.61□□□□□ -0.23
CCNC-213ENST00000523541 C22orf42Q6IC83 251 aa13.61□□□□□ -0.23
CCNC-213ENST00000523541 ZNF773Q6PK81 442 aa13.61□□□□□ -0.23
CCNC-213ENST00000523541 OR10R2Q8NGX6 335 aa13.61□□□□□ -0.23
CCNC-213ENST00000523541 NOL4LQ96MY1 436 aaPredicted RBP13.61□□□□□ -0.23
CCNC-213ENST00000523541 RNF5Q99942 180 aa13.61□□□□□ -0.23
CCNC-213ENST00000523541 AGMATQ9BSE5 352 aa13.61□□□□□ -0.23
CCNC-213ENST00000523541 LINC00527Q9UJ94 153 aa13.61□□□□□ -0.23
CCNC-213ENST00000523541 SSR3Q9UNL2 185 aa13.61□□□□□ -0.23
CCNC-213ENST00000523541 PLXNB1O43157 2135 aa13.61□□□□□ -0.23
CCNC-213ENST00000523541 SAA2-SAA4A0A096LPE2 208 aa13.6□□□□□ -0.23
CCNC-213ENST00000523541 SHISA3A0PJX4 238 aa13.6□□□□□ -0.23
CCNC-213ENST00000523541 NOTOA8MTQ0 251 aa13.6□□□□□ -0.23
CCNC-213ENST00000523541 NUDT19A8MXV4 375 aa13.6□□□□□ -0.23
CCNC-213ENST00000523541 CD3GP09693 182 aa13.6□□□□□ -0.23
CCNC-213ENST00000523541 SAA2P0DJI9 122 aaPredicted RBP13.6□□□□□ -0.23
CCNC-213ENST00000523541 F2RL1P55085 397 aa13.6□□□□□ -0.23
CCNC-213ENST00000523541 KIR2DS1Q14954 304 aa13.6□□□□□ -0.23
CCNC-213ENST00000523541 Q6ZPA2 131 aa13.6□□□□□ -0.23
CCNC-213ENST00000523541 NPBQ8NG41 125 aa13.6□□□□□ -0.23
CCNC-213ENST00000523541 OR4A4PQ8NGN8 299 aa13.6□□□□□ -0.23
CCNC-213ENST00000523541 CYYR1Q96J86 154 aa13.6□□□□□ -0.23
CCNC-213ENST00000523541 ZNF251Q9BRH9 671 aa13.6□□□□□ -0.23
CCNC-213ENST00000523541 TXNL4BQ9NX01 149 aaKnown RBP13.6□□□□□ -0.23
CCNC-213ENST00000523541 TGP01266 2768 aa13.59□□□□□ -0.23
CCNC-213ENST00000523541 OR5H14A6NHG9 310 aa13.59□□□□□ -0.23
CCNC-213ENST00000523541 RAB27BO00194 218 aa13.59□□□□□ -0.23
CCNC-213ENST00000523541 RBBP9O75884 186 aa13.59□□□□□ -0.23
CCNC-213ENST00000523541 SCGNO76038 276 aa13.59□□□□□ -0.23
CCNC-213ENST00000523541 ELANEP08246 267 aa13.59□□□□□ -0.23
CCNC-213ENST00000523541 IGLL1P15814 213 aa13.59□□□□□ -0.23
CCNC-213ENST00000523541 OR10A3P58181 314 aa13.59□□□□□ -0.23
CCNC-213ENST00000523541 ACTBP60709 375 aa13.59□□□□□ -0.23
CCNC-213ENST00000523541 RPL23AP62750 156 aaKnown RBP13.59□□□□□ -0.23
CCNC-213ENST00000523541 MMDQ15546 238 aa13.59□□□□□ -0.23
CCNC-213ENST00000523541 KCTD21Q4G0X4 260 aa13.59□□□□□ -0.23
CCNC-213ENST00000523541 C5orf24Q7Z6I8 188 aa13.59□□□□□ -0.23
CCNC-213ENST00000523541 RNF152Q8N8N0 203 aa13.59□□□□□ -0.23
CCNC-213ENST00000523541 HDHD3Q9BSH5 251 aaPredicted RBP13.59□□□□□ -0.23
CCNC-213ENST00000523541 MRPL20Q9BYC9 149 aaKnown RBP13.59□□□□□ -0.23
CCNC-213ENST00000523541 C11orf54Q9H0W9 315 aaPredicted RBP13.59□□□□□ -0.23
CCNC-213ENST00000523541 GAB2Q9UQC2 676 aa13.59□□□□□ -0.23
CCNC-213ENST00000523541 KCNK7Q9Y2U2 307 aa13.59□□□□□ -0.23
CCNC-213ENST00000523541 NOTCH3Q9UM47 2321 aa13.59□□□□□ -0.23
CCNC-213ENST00000523541 TMEM127O75204 238 aa13.58□□□□□ -0.24
CCNC-213ENST00000523541 HLA-DRB1P01911 266 aa13.58□□□□□ -0.24
CCNC-213ENST00000523541 SCTP09683 121 aa13.58□□□□□ -0.24
CCNC-213ENST00000523541 OR3A3P47888 321 aa13.58□□□□□ -0.24
CCNC-213ENST00000523541 SCAND1P57086 179 aa13.58□□□□□ -0.24
CCNC-213ENST00000523541 FOXE3Q13461 319 aa13.58□□□□□ -0.24
CCNC-213ENST00000523541 Q6ZS49 121 aa13.58□□□□□ -0.24
CCNC-213ENST00000523541 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.58□□□□□ -0.24
CCNC-213ENST00000523541 OR5AN1Q8NGI8 311 aa13.58□□□□□ -0.24
CCNC-213ENST00000523541 MRAPQ8TCY5 172 aa13.58□□□□□ -0.24
CCNC-213ENST00000523541 RCC1LQ96I51 464 aaKnown RBP13.58□□□□□ -0.24
CCNC-213ENST00000523541 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.58□□□□□ -0.24
CCNC-213ENST00000523541 NECAP2Q9NVZ3 263 aa13.58□□□□□ -0.24
CCNC-213ENST00000523541 KIAA1456Q9P272 454 aa13.58□□□□□ -0.24
CCNC-213ENST00000523541 PRKDCP78527 4128 aaKnown RBP13.58□□□□□ -0.24
CCNC-213ENST00000523541 LINC01548A6NM66 108 aa13.57□□□□□ -0.24
CCNC-213ENST00000523541 MFNGO00587 321 aa13.57□□□□□ -0.24
CCNC-213ENST00000523541 NBR2O15453 112 aa13.57□□□□□ -0.24
CCNC-213ENST00000523541 ST8SIA5O15466 376 aa13.57□□□□□ -0.24
CCNC-213ENST00000523541 NDUFA3O95167 84 aa13.57□□□□□ -0.24
CCNC-213ENST00000523541 CT45A6P0DMU7 189 aa13.57□□□□□ -0.24
CCNC-213ENST00000523541 CT45A5P0DMU8 189 aa13.57□□□□□ -0.24
CCNC-213ENST00000523541 CT45A7P0DMV0 189 aa13.57□□□□□ -0.24
CCNC-213ENST00000523541 HIST1H1DP16402 221 aaKnown RBP13.57□□□□□ -0.24
CCNC-213ENST00000523541 VDAC1P21796 283 aa13.57□□□□□ -0.24
CCNC-213ENST00000523541 LIN54Q6MZP7 749 aa13.57□□□□□ -0.24
CCNC-213ENST00000523541 KCTD7Q96MP8 289 aa13.57□□□□□ -0.24
CCNC-213ENST00000523541 GPR61Q9BZJ8 451 aa13.57□□□□□ -0.24
CCNC-213ENST00000523541 ZNF107Q9UII5 783 aaPredicted RBP13.57□□□□□ -0.24
CCNC-213ENST00000523541 ZNF221Q9UK13 617 aa13.57□□□□□ -0.24
CCNC-213ENST00000523541 FABP7O15540 132 aa13.56□□□□□ -0.24
CCNC-213ENST00000523541 IGHG4P01861 327 aa13.56□□□□□ -0.24
CCNC-213ENST00000523541 TALDO1P37837 337 aa13.56□□□□□ -0.24
CCNC-213ENST00000523541 MYCNOSP40205 109 aa13.56□□□□□ -0.24
CCNC-213ENST00000523541 CDX1P47902 265 aaPredicted RBP13.56□□□□□ -0.24
CCNC-213ENST00000523541 C5orf64Q2M2E5 130 aa13.56□□□□□ -0.24
CCNC-213ENST00000523541 CXorf66Q5JRM2 361 aaPredicted RBP13.56□□□□□ -0.24
CCNC-213ENST00000523541 OR10J5Q8NHC4 309 aa13.56□□□□□ -0.24
CCNC-213ENST00000523541 OR1A1Q9P1Q5 309 aa13.56□□□□□ -0.24
CCNC-213ENST00000523541 RRP15Q9Y3B9 282 aaKnown RBP13.56□□□□□ -0.24
CCNC-213ENST00000523541 WASHC3Q9Y3C0 194 aa13.56□□□□□ -0.24
CCNC-213ENST00000523541 TRBV6-7A0A0A0MS04 114 aa13.55□□□□□ -0.24
CCNC-213ENST00000523541 FCGR3AP08637 254 aa13.55□□□□□ -0.24
CCNC-213ENST00000523541 GNB3P16520 340 aa13.55□□□□□ -0.24
CCNC-213ENST00000523541 DTYMKP23919 212 aa13.55□□□□□ -0.24
CCNC-213ENST00000523541 THBS3P49746 956 aa13.55□□□□□ -0.24
CCNC-213ENST00000523541 PITPNAQ00169 270 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms