RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 GLB1P16278 677 aa7.15□□□□□ -1.26
CSMD1-213ENST00000523488 S100GP29377 79 aa7.15□□□□□ -1.26
CSMD1-213ENST00000523488 ADMP35318 185 aa7.15□□□□□ -1.26
CSMD1-213ENST00000523488 TLE3Q04726 772 aa7.15□□□□□ -1.26
CSMD1-213ENST00000523488 TMEM211Q6ICI0 200 aa7.15□□□□□ -1.26
CSMD1-213ENST00000523488 PP6455Q8WZ26 134 aa7.15□□□□□ -1.26
CSMD1-213ENST00000523488 NEIL1Q96FI4 390 aaPredicted RBP7.15□□□□□ -1.26
CSMD1-213ENST00000523488 TMED7-TICAM2A0A0A6YYA0 188 aa7.15□□□□□ -1.27
CSMD1-213ENST00000523488 IGKV1D-43A0A0B4J1Z2 117 aa7.15□□□□□ -1.27
CSMD1-213ENST00000523488 A0A1W2PP55 124 aa7.15□□□□□ -1.27
CSMD1-213ENST00000523488 NRASP01111 189 aa7.15□□□□□ -1.27
CSMD1-213ENST00000523488 KRASP01116 189 aa7.15□□□□□ -1.27
CSMD1-213ENST00000523488 CDC34P49427 236 aaPredicted RBP7.15□□□□□ -1.27
CSMD1-213ENST00000523488 DAP3P51398 398 aaKnown RBP7.15□□□□□ -1.27
CSMD1-213ENST00000523488 HBG1P69891 147 aa7.15□□□□□ -1.27
CSMD1-213ENST00000523488 HBG2P69892 147 aa7.15□□□□□ -1.27
CSMD1-213ENST00000523488 PDLIM3Q53GG5 364 aaPredicted RBP7.15□□□□□ -1.27
CSMD1-213ENST00000523488 KIAA2026Q5HYC2 2103 aa7.15□□□□□ -1.27
CSMD1-213ENST00000523488 GPR27Q9NS67 375 aa7.15□□□□□ -1.27
CSMD1-213ENST00000523488 RNF114Q9Y508 228 aa7.15□□□□□ -1.27
CSMD1-213ENST00000523488 H0Y980 276 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 GDF9O60383 454 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 HYPMO75409 117 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 TNFSF15O95150 251 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 NPPCP23582 126 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 EFNA3P52797 238 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 RIPPLY3P57055 190 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 EIF4EBP1Q13541 118 aaPredicted RBP7.14□□□□□ -1.27
CSMD1-213ENST00000523488 C11orf52Q96A22 123 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 EMC6Q9BV81 110 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 RTN4RQ9BZR6 473 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 ZNF442Q9H7R0 627 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 SLC25A22Q9H936 323 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 MED29Q9NX70 200 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 RIF1Q5UIP0 2472 aaKnown RBP7.14□□□□□ -1.27
CSMD1-213ENST00000523488 SPTA1P02549 2419 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 A0A1W2PR80 420 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 A0A1W2PRS3 328 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 OR5B21A6NL26 309 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 H0YJW9 148 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 WISP1O95388 367 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 NTF3P20783 257 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 HTD2P86397 168 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 LRRC10Q5BKY1 277 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 SLC35E4Q6ICL7 350 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 UFSP1Q6NVU6 142 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 BRICD5Q6PL45 260 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 BHLHA15Q7RTS1 189 aaPredicted RBP7.14□□□□□ -1.27
CSMD1-213ENST00000523488 S100A7AQ86SG5 101 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 WDR5BQ86VZ2 330 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 DTX1Q86Y01 620 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 OR8B12Q8NGG6 310 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 EML6Q6ZMW3 1958 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 IAPPP10997 89 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 HLA-DOBP13765 273 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 BMI1P35226 326 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 ARL4DP49703 201 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 DLX2Q07687 328 aaPredicted RBP7.14□□□□□ -1.27
CSMD1-213ENST00000523488 PLPPR5Q32ZL2 321 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 WNT10AQ9GZT5 417 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 CLN8Q9UBY8 286 aa7.14□□□□□ -1.27
CSMD1-213ENST00000523488 HNRNPA2B1P22626 353 aaKnown RBP7.13□□□□□ -1.27
CSMD1-213ENST00000523488 CBLN1P23435 193 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 SUMO3P55854 103 aaPredicted RBP7.13□□□□□ -1.27
CSMD1-213ENST00000523488 TBR1Q16650 682 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 RSPO1Q2MKA7 263 aaPredicted RBP7.13□□□□□ -1.27
CSMD1-213ENST00000523488 DEFB110Q30KQ9 67 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 TMEM14EPQ6UXP3 125 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 NIT1Q86X76 327 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 ATOH7Q8N100 152 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 WIPF2Q8TF74 440 aaPredicted RBP7.13□□□□□ -1.27
CSMD1-213ENST00000523488 MEGF9Q9H1U4 602 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 PNO1Q9NRX1 252 aaKnown RBP7.13□□□□□ -1.27
CSMD1-213ENST00000523488 SLC7A10Q9NS82 523 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 ZNF391Q9UJN7 358 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 FAM90A26D6RGX4 464 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 ANGPTL7O43827 346 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 PAGE4O60829 102 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 ZNF253O75346 499 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 NAPSAO96009 420 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 SERPINE2P07093 398 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 PSG1P11464 419 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 MSR1P21757 451 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 VDAC1P21796 283 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 PMP22Q01453 160 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 SNAI3Q3KNW1 292 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 C16orf54Q6UWD8 224 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 TBC1D26Q86UD7 250 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 NUDT22Q9BRQ3 303 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 RBM24Q9BX46 236 aaKnown RBP7.13□□□□□ -1.27
CSMD1-213ENST00000523488 WDR61Q9GZS3 305 aaKnown RBP7.13□□□□□ -1.27
CSMD1-213ENST00000523488 FAM60AQ9NP50 221 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 SOHLH2Q9NX45 425 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 CD300LBA8K4G0 201 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 E9PLN8 166 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 F5H5K5 113 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 GPX1P07203 203 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 BIDP55957 195 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 CLRN1P58418 232 aa7.13□□□□□ -1.27
CSMD1-213ENST00000523488 C10orf128Q5T292 105 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms