RNA–Protein interactions for RNA: ENST00000523334.1

HDAC2-215, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 4,810 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-215ENST00000523334 MRPS11P82912 194 aaKnown RBP3.28□□□□□ -1.88
HDAC2-215ENST00000523334 NHLH1Q02575 133 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 BTN1A1Q13410 526 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 MALRD1Q5VYJ5 2156 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 THNSL2Q86YJ6 484 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 TMEM252Q8N6L7 170 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 ZNRF1Q8ND25 227 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 OR10P1Q8NGE3 313 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 ANGPTL6Q8NI99 470 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 RBMXL1Q96E39 390 aaKnown RBP3.28□□□□□ -1.88
HDAC2-215ENST00000523334 CYYR1Q96J86 154 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 LURAP1Q96LR2 239 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 VKORC1Q9BQB6 163 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 MRPL37Q9BZE1 423 aaKnown RBP3.28□□□□□ -1.88
HDAC2-215ENST00000523334 GAL3ST2Q9H3Q3 398 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 CACFD1Q9UGQ2 172 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 TUBD1Q9UJT1 453 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 PPIAL4AQ9Y536 164 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 NCKAP5O14513 1909 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 A0A0G2JNJ9 132 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 A0A1W2PPH5 198 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 RAB19A4D1S5 217 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 SNAPINO95295 136 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 PTBP3O95758 552 aaKnown RBP3.28□□□□□ -1.88
HDAC2-215ENST00000523334 METTL15P1P0C7V9 234 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 MMP9P14780 707 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 RPS2P15880 293 aaKnown RBP3.28□□□□□ -1.88
HDAC2-215ENST00000523334 RPL31P62899 125 aaKnown RBP3.28□□□□□ -1.88
HDAC2-215ENST00000523334 NHLH2Q02577 135 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 BSPH1Q075Z2 132 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 HNF4GQ14541 408 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 TESK1Q15569 626 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 RTL8BQ17RB0 113 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 PDLIM3Q53GG5 364 aaPredicted RBP3.28□□□□□ -1.88
HDAC2-215ENST00000523334 UQCC3Q6UW78 93 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 IL34Q6ZMJ4 242 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 ZNF66Q6ZN08 573 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 C5orf24Q7Z6I8 188 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 ZNF645Q8N7E2 425 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 BVESQ8NE79 360 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 OR13A1Q8NGR1 328 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 SFT2D1Q8WV19 159 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 GPR146Q96CH1 333 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 ADTRPQ96IZ2 230 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 TMEM56Q96MV1 263 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 AIFM2Q9BRQ8 373 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 CABLES2Q9BTV7 478 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 CALYQ9NYX4 217 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 Q9UFV3 132 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 TMEM56-RWDD3S4R434 201 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 DOCK11Q5JSL3 2073 aa3.28□□□□□ -1.88
HDAC2-215ENST00000523334 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.27□□□□□ -1.892e-7■■■■■ 29.8
HDAC2-215ENST00000523334 CYB5R3P00387 301 aaPredicted RBP3.27□□□□□ -1.89
HDAC2-215ENST00000523334 GYPAP02724 150 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 SEC11BP0C7V7 166 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 MUC1P15941 1255 aaPredicted RBP3.27□□□□□ -1.89
HDAC2-215ENST00000523334 ZP3P21754 424 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 HOXA1P49639 335 aaPredicted RBP3.27□□□□□ -1.89
HDAC2-215ENST00000523334 GNG10P50151 68 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 ERVK11-1P61568 191 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 RAB11AP62491 216 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 FAM201AQ5SY85 155 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 ZNF324BQ6AW86 544 aaPredicted RBP3.27□□□□□ -1.89
HDAC2-215ENST00000523334 CRIP3Q6Q6R5 217 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 WDR86Q86TI4 376 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 GCSAMQ8N6F7 178 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 OR10X1Q8NGY0 326 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 OR4S2Q8NH73 311 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 TMEM171Q8WVE6 324 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 PINX1Q96BK5 328 aaKnown RBP3.27□□□□□ -1.89
HDAC2-215ENST00000523334 C14orf79Q96F83 325 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 LIME1Q9H400 295 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 TMEM231Q9H6L2 316 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 IFT22Q9H7X7 185 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 MMP26Q9NRE1 261 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 JPT1Q9UK76 154 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 LY86O95711 162 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 HRASP01112 189 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 CGAP01215 116 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 ACAA1P09110 424 aaPredicted RBP3.27□□□□□ -1.89
HDAC2-215ENST00000523334 CHRNB4P30926 498 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 SULT1A1P50225 295 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 DYNLT3P51808 116 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 TMEM267Q0VDI3 215 aaPredicted RBP3.27□□□□□ -1.89
HDAC2-215ENST00000523334 HERPUD1Q15011 391 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 HMGN3Q15651 99 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 FAM209AQ5JX71 171 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 C20orf204Q6ZNR8 217 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 Q6ZR03 302 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 FGFRL1Q8N441 504 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 COMMD1Q8N668 190 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 UBAC2Q8NBM4 344 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 PRR7Q8TB68 274 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 LSM10Q969L4 123 aaKnown RBP3.27□□□□□ -1.89
HDAC2-215ENST00000523334 R3HDM4Q96D70 268 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 DCTN5Q9BTE1 182 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 SLC39A9Q9NUM3 307 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 MED9Q9NWA0 146 aa3.27□□□□□ -1.89
HDAC2-215ENST00000523334 CISD1Q9NZ45 108 aaKnown RBP3.27□□□□□ -1.89
HDAC2-215ENST00000523334 RNF115Q9Y4L5 304 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms