RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 OR51B6Q9H340 312 aa0.73□□□□□ -2.29
PCM1-217ENST00000522998 HHLA2Q9UM44 414 aa0.73□□□□□ -2.29
PCM1-217ENST00000522998 DICER1Q9UPY3 1922 aaKnown RBP0.73□□□□□ -2.29
PCM1-217ENST00000522998 MYH11P35749 1972 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 DIDO1Q9BTC0 2240 aaKnown RBP0.72□□□□□ -2.29
PCM1-217ENST00000522998 NAV1Q8NEY1 1877 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 IGLV3-9A0A075B6K5 115 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 IGHV3-15A0A0B4J1V0 119 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 GRIFINA4D1Z8 144 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 LINC00862A6NCI5 91 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 ZNF860A6NHJ4 632 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 MKRN2OSH3BPM6 223 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 CD7P09564 240 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 CCL3P10147 92 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 ESDP10768 282 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 SLC25A16P16260 332 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 ORM2P19652 201 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 SYT1P21579 422 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 AGTR1P30556 359 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 SULT1A2P50226 295 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 PSMD7P51665 324 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.72□□□□□ -2.29
PCM1-217ENST00000522998 OR52E4Q8NGH9 312 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 OR5AK3PQ8NH89 298 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 DCANP1Q8TF63 244 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 CCDC12Q8WUD4 166 aaPredicted RBP0.72□□□□□ -2.29
PCM1-217ENST00000522998 ACY3Q96HD9 319 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 ABHD14BQ96IU4 210 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 MGLLQ99685 303 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 PECRQ9BY49 303 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 ASCL3Q9NQ33 180 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 CHMP5Q9NZZ3 219 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 PSMD13Q9UNM6 376 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 AMMECR1Q9Y4X0 333 aaPredicted RBP0.72□□□□□ -2.29
PCM1-217ENST00000522998 FAM215AQ9Y5M1 114 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 SNX10Q9Y5X0 201 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 ZFHX2Q9C0A1 2572 aaPredicted RBP0.72□□□□□ -2.29
PCM1-217ENST00000522998 RTEL1-TNFRSF6BF6WH68 1400 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 COL4A1P02462 1669 aa0.72□□□□□ -2.29
PCM1-217ENST00000522998 CUL9Q8IWT3 2517 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 HEATR5AQ86XA9 2040 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 VPS37CA5D8V6 355 aaPredicted RBP0.71□□□□□ -2.3
PCM1-217ENST00000522998 TMEM235A6NFC5 223 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 FAM25EA8MYX2 175 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 SLC17A3O00476 420 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 UBFD1O14562 309 aaKnown RBP0.71□□□□□ -2.3
PCM1-217ENST00000522998 STK16O75716 305 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 CRHBPP24387 322 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 ATP6V0CP27449 155 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 KDELR2P33947 212 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 HSPA9P38646 679 aaKnown RBP0.71□□□□□ -2.3
PCM1-217ENST00000522998 CD200P41217 278 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 ACTBP60709 375 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 ACTG1P63261 375 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 SLAMF1Q13291 335 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 C1DQ13901 141 aaKnown RBP0.71□□□□□ -2.3
PCM1-217ENST00000522998 CLEC12BQ2HXU8 276 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 N4BP2L1Q5TBK1 243 aaPredicted RBP0.71□□□□□ -2.3
PCM1-217ENST00000522998 FAM45BPQ6NSW5 357 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 XKRXQ6PP77 449 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 SCGB1D4Q6XE38 83 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 CCDC121Q6ZUS5 278 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 SLC13A5Q86YT5 568 aaPredicted RBP0.71□□□□□ -2.3
PCM1-217ENST00000522998 ZNF283Q8N7M2 679 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 OR4X1Q8NH49 305 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 STOML3Q8TAV4 291 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 SMIM12Q96EX1 92 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 ZNF625Q96I27 306 aaPredicted RBP0.71□□□□□ -2.3
PCM1-217ENST00000522998 TRNT1Q96Q11 434 aaKnown RBP0.71□□□□□ -2.3
PCM1-217ENST00000522998 OR7D2Q96RA2 312 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 OR52B2Q96RD2 323 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 NKX6-2Q9C056 277 aaPredicted RBP0.71□□□□□ -2.3
PCM1-217ENST00000522998 MED28Q9H204 178 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 TREM1Q9NP99 234 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 C1orf109Q9NX04 203 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 NDUFB11Q9NX14 153 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 GLS2Q9UI32 602 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.71□□□□□ -2.3
PCM1-217ENST00000522998 MED12LQ86YW9 2145 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 NPATQ14207 1427 aa0.71□□□□□ -2.3
PCM1-217ENST00000522998 TENM3Q9P273 2699 aa0.7□□□□□ -2.3
PCM1-217ENST00000522998 PXDNLA1KZ92 1463 aa0.7□□□□□ -2.3
PCM1-217ENST00000522998 TMEM213A2RRL7 107 aa0.7□□□□□ -2.3
PCM1-217ENST00000522998 OR5K4A6NMS3 321 aa0.7□□□□□ -2.3
PCM1-217ENST00000522998 F8VZ95 297 aa0.7□□□□□ -2.3
PCM1-217ENST00000522998 ZW10O43264 779 aa0.7□□□□□ -2.3
PCM1-217ENST00000522998 GNRH2O43555 120 aa0.7□□□□□ -2.3
PCM1-217ENST00000522998 SCN2BO60939 215 aa0.7□□□□□ -2.3
PCM1-217ENST00000522998 ARL6IP5O75915 188 aa0.7□□□□□ -2.3
PCM1-217ENST00000522998 ASS1P00966 412 aaKnown RBP0.7□□□□□ -2.3
PCM1-217ENST00000522998 OR13C7P0DN81 318 aa0.7□□□□□ -2.3
PCM1-217ENST00000522998 ALOX5APP20292 161 aa0.7□□□□□ -2.3
PCM1-217ENST00000522998 CD24P25063 80 aa0.7□□□□□ -2.3
PCM1-217ENST00000522998 CRYBB3P26998 211 aa0.7□□□□□ -2.3
PCM1-217ENST00000522998 DAPP51397 102 aa0.7□□□□□ -2.3
PCM1-217ENST00000522998 SNAP25P60880 206 aa0.7□□□□□ -2.3
PCM1-217ENST00000522998 DAD1P61803 113 aa0.7□□□□□ -2.3
PCM1-217ENST00000522998 TBC1D28Q2M2D7 210 aa0.7□□□□□ -2.3
PCM1-217ENST00000522998 MESTQ5EB52 335 aa0.7□□□□□ -2.3
PCM1-217ENST00000522998 SPATA31B1PQ5VZV4 182 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms