RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 CLEC2LP0C7M8 214 aa13□□□□□ -0.33
PABPC1-221ENST00000522720 SAA2P0DJI9 122 aaPredicted RBP13□□□□□ -0.33
PABPC1-221ENST00000522720 CEACAM6P40199 344 aa13□□□□□ -0.33
PABPC1-221ENST00000522720 OR3A3P47888 321 aa13□□□□□ -0.33
PABPC1-221ENST00000522720 MXD1Q05195 221 aa13□□□□□ -0.33
PABPC1-221ENST00000522720 LSAMPQ13449 338 aa13□□□□□ -0.33
PABPC1-221ENST00000522720 ARL6IP1Q15041 203 aa13□□□□□ -0.33
PABPC1-221ENST00000522720 OR5AU1Q8NGC0 362 aa13□□□□□ -0.33
PABPC1-221ENST00000522720 OR8H1Q8NGG4 311 aa13□□□□□ -0.33
PABPC1-221ENST00000522720 AGMATQ9BSE5 352 aa13□□□□□ -0.33
PABPC1-221ENST00000522720 PARP12Q9H0J9 701 aaKnown RBP13□□□□□ -0.33
PABPC1-221ENST00000522720 GHITMQ9H3K2 345 aa13□□□□□ -0.33
PABPC1-221ENST00000522720 PIPOXQ9P0Z9 390 aa13□□□□□ -0.33
PABPC1-221ENST00000522720 OR1A1Q9P1Q5 309 aa13□□□□□ -0.33
PABPC1-221ENST00000522720 NOTCH1P46531 2555 aa12.99□□□□□ -0.33
PABPC1-221ENST00000522720 CMYA5Q8N3K9 4069 aa12.99□□□□□ -0.33
PABPC1-221ENST00000522720 A0A075B6Q4 140 aa12.99□□□□□ -0.33
PABPC1-221ENST00000522720 IGKV1-6A0A0C4DH72 117 aa12.99□□□□□ -0.33
PABPC1-221ENST00000522720 NCBP2LA6PVI3 153 aaKnown RBP12.99□□□□□ -0.33
PABPC1-221ENST00000522720 RAB29O14966 203 aa12.99□□□□□ -0.33
PABPC1-221ENST00000522720 ST8SIA5O15466 376 aa12.99□□□□□ -0.33
PABPC1-221ENST00000522720 FCGR3AP08637 254 aa12.99□□□□□ -0.33
PABPC1-221ENST00000522720 SNRPBP14678 240 aaKnown RBP12.99□□□□□ -0.33
PABPC1-221ENST00000522720 FAM71F2Q6NXP2 309 aa12.99□□□□□ -0.33
PABPC1-221ENST00000522720 OR4A4PQ8NGN8 299 aa12.99□□□□□ -0.33
PABPC1-221ENST00000522720 LGALS14Q8TCE9 139 aa12.99□□□□□ -0.33
PABPC1-221ENST00000522720 EDARADDQ8WWZ3 215 aa12.99□□□□□ -0.33
PABPC1-221ENST00000522720 NABP2Q9BQ15 211 aa12.99□□□□□ -0.33
PABPC1-221ENST00000522720 ZNF251Q9BRH9 671 aa12.99□□□□□ -0.33
PABPC1-221ENST00000522720 MRPL20Q9BYC9 149 aaKnown RBP12.99□□□□□ -0.33
PABPC1-221ENST00000522720 C11orf54Q9H0W9 315 aaPredicted RBP12.99□□□□□ -0.33
PABPC1-221ENST00000522720 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.99□□□□□ -0.33
PABPC1-221ENST00000522720 FABP7O15540 132 aa12.98□□□□□ -0.33
PABPC1-221ENST00000522720 TALDO1P37837 337 aa12.98□□□□□ -0.33
PABPC1-221ENST00000522720 SCAND1P57086 179 aa12.98□□□□□ -0.33
PABPC1-221ENST00000522720 CD83Q01151 205 aa12.98□□□□□ -0.33
PABPC1-221ENST00000522720 KIR2DS1Q14954 304 aa12.98□□□□□ -0.33
PABPC1-221ENST00000522720 SRSF7Q16629 238 aaKnown RBP eCLIP12.98□□□□□ -0.33
PABPC1-221ENST00000522720 CDNFQ49AH0 187 aa12.98□□□□□ -0.33
PABPC1-221ENST00000522720 NDUFA11Q86Y39 141 aa12.98□□□□□ -0.33
PABPC1-221ENST00000522720 Q8N9W7 124 aa12.98□□□□□ -0.33
PABPC1-221ENST00000522720 FAM110DQ8TAY7 271 aaPredicted RBP12.98□□□□□ -0.33
PABPC1-221ENST00000522720 ISOC1Q96CN7 298 aa12.98□□□□□ -0.33
PABPC1-221ENST00000522720 S1PR3Q99500 378 aa12.98□□□□□ -0.33
PABPC1-221ENST00000522720 CITED2Q99967 270 aaPredicted RBP12.98□□□□□ -0.33
PABPC1-221ENST00000522720 LIN7CQ9NUP9 197 aaKnown RBP12.98□□□□□ -0.33
PABPC1-221ENST00000522720 TMEM127O75204 238 aa12.97□□□□□ -0.33
PABPC1-221ENST00000522720 SCGNO76038 276 aa12.97□□□□□ -0.33
PABPC1-221ENST00000522720 DIRAS3O95661 229 aa12.97□□□□□ -0.33
PABPC1-221ENST00000522720 IGHG2P01859 326 aa12.97□□□□□ -0.33
PABPC1-221ENST00000522720 GSTT2P0CG29 244 aa12.97□□□□□ -0.33
PABPC1-221ENST00000522720 GSTT2BP0CG30 244 aa12.97□□□□□ -0.33
PABPC1-221ENST00000522720 SERPINB10P48595 397 aa12.97□□□□□ -0.33
PABPC1-221ENST00000522720 F2RL1P55085 397 aa12.97□□□□□ -0.33
PABPC1-221ENST00000522720 ARFRP1Q13795 201 aa12.97□□□□□ -0.33
PABPC1-221ENST00000522720 CTF1Q16619 201 aa12.97□□□□□ -0.33
PABPC1-221ENST00000522720 IDNKQ5T6J7 187 aa12.97□□□□□ -0.33
PABPC1-221ENST00000522720 Q6ZS49 121 aa12.97□□□□□ -0.33
PABPC1-221ENST00000522720 CROCCP3Q8IVE0 287 aa12.97□□□□□ -0.33
PABPC1-221ENST00000522720 RBMXL1Q96E39 390 aaKnown RBP12.97□□□□□ -0.33
PABPC1-221ENST00000522720 ABHD14BQ96IU4 210 aa12.97□□□□□ -0.33
PABPC1-221ENST00000522720 TOLLIPQ9H0E2 274 aa12.97□□□□□ -0.33
PABPC1-221ENST00000522720 ABCG5Q9H222 651 aa12.97□□□□□ -0.33
PABPC1-221ENST00000522720 RHBDL2Q9NX52 303 aa12.97□□□□□ -0.33
PABPC1-221ENST00000522720 RDH8Q9NYR8 311 aa12.97□□□□□ -0.33
PABPC1-221ENST00000522720 ZNF230Q9UIE0 474 aaPredicted RBP12.97□□□□□ -0.33
PABPC1-221ENST00000522720 ELF5Q9UKW6 265 aaPredicted RBP12.97□□□□□ -0.33
PABPC1-221ENST00000522720 ETV7Q9Y603 341 aa12.97□□□□□ -0.33
PABPC1-221ENST00000522720 ADARB2-AS1A8MUL3 147 aa12.96□□□□□ -0.33
PABPC1-221ENST00000522720 GSTP1P09211 210 aaKnown RBP12.96□□□□□ -0.33
PABPC1-221ENST00000522720 LSM3P62310 102 aaKnown RBP12.96□□□□□ -0.33
PABPC1-221ENST00000522720 NSUN5P1Q3KNT7 163 aa12.96□□□□□ -0.33
PABPC1-221ENST00000522720 RPL39P5Q59GN2 51 aa12.96□□□□□ -0.33
PABPC1-221ENST00000522720 IGSF11Q5DX21 431 aa12.96□□□□□ -0.33
PABPC1-221ENST00000522720 TCTEX1D4Q5JR98 221 aa12.96□□□□□ -0.33
PABPC1-221ENST00000522720 HACD4Q5VWC8 232 aa12.96□□□□□ -0.33
PABPC1-221ENST00000522720 SLC35E3Q7Z769 313 aa12.96□□□□□ -0.33
PABPC1-221ENST00000522720 FAM71E2Q8N5Q1 922 aa12.96□□□□□ -0.33
PABPC1-221ENST00000522720 OR5H6Q8NGV6 325 aa12.96□□□□□ -0.33
PABPC1-221ENST00000522720 CABLES2Q9BTV7 478 aa12.96□□□□□ -0.33
PABPC1-221ENST00000522720 RBM38Q9H0Z9 239 aaKnown RBP12.96□□□□□ -0.33
PABPC1-221ENST00000522720 NOTCH3Q9UM47 2321 aa12.96□□□□□ -0.34
PABPC1-221ENST00000522720 TRBV6-7A0A0A0MS04 114 aa12.95□□□□□ -0.34
PABPC1-221ENST00000522720 LINC01548A6NM66 108 aa12.95□□□□□ -0.34
PABPC1-221ENST00000522720 CT45A6P0DMU7 189 aa12.95□□□□□ -0.34
PABPC1-221ENST00000522720 CT45A5P0DMU8 189 aa12.95□□□□□ -0.34
PABPC1-221ENST00000522720 CT45A7P0DMV0 189 aa12.95□□□□□ -0.34
PABPC1-221ENST00000522720 DTYMKP23919 212 aa12.95□□□□□ -0.34
PABPC1-221ENST00000522720 VBP1P61758 197 aa12.95□□□□□ -0.34
PABPC1-221ENST00000522720 ZNF260Q3ZCT1 412 aa12.95□□□□□ -0.34
PABPC1-221ENST00000522720 C10orf99Q6UWK7 81 aa12.95□□□□□ -0.34
PABPC1-221ENST00000522720 OR4X2Q8NGF9 303 aa12.95□□□□□ -0.34
PABPC1-221ENST00000522720 CHPT1Q8WUD6 406 aa12.95□□□□□ -0.34
PABPC1-221ENST00000522720 MAFIPQ8WZ33 124 aa12.95□□□□□ -0.34
PABPC1-221ENST00000522720 SLC25A38Q96DW6 304 aa12.95□□□□□ -0.34
PABPC1-221ENST00000522720 NOL4LQ96MY1 436 aaPredicted RBP12.95□□□□□ -0.34
PABPC1-221ENST00000522720 RASL11BQ9BPW5 248 aa12.95□□□□□ -0.34
PABPC1-221ENST00000522720 NAA50Q9GZZ1 169 aaKnown RBP12.95□□□□□ -0.34
PABPC1-221ENST00000522720 RNF150Q9ULK6 438 aa12.95□□□□□ -0.34
PABPC1-221ENST00000522720 MEGF8Q7Z7M0 2845 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms