RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 CALRP27797 417 aaKnown RBP16.18■□□□□ 0.18
SDCBP-209ENST00000522243 VEGFCP49767 419 aa16.18■□□□□ 0.18
SDCBP-209ENST00000522243 KIR2DS1Q14954 304 aa16.18■□□□□ 0.18
SDCBP-209ENST00000522243 FAM131AQ6UXB0 335 aa16.18■□□□□ 0.18
SDCBP-209ENST00000522243 PRSS48Q7RTY5 328 aa16.18■□□□□ 0.18
SDCBP-209ENST00000522243 FAM89BQ8N5H3 189 aa16.18■□□□□ 0.18
SDCBP-209ENST00000522243 OR8U1Q8NH10 309 aa16.18■□□□□ 0.18
SDCBP-209ENST00000522243 OR51J1Q9H342 316 aa16.18■□□□□ 0.18
SDCBP-209ENST00000522243 OR1A1Q9P1Q5 309 aa16.18■□□□□ 0.18
SDCBP-209ENST00000522243 SLC23A1Q9UHI7 598 aa16.18■□□□□ 0.18
SDCBP-209ENST00000522243 IGHV7-81A0A0B4J1V7 117 aa16.17■□□□□ 0.18
SDCBP-209ENST00000522243 SCTP09683 121 aa16.17■□□□□ 0.18
SDCBP-209ENST00000522243 PSMB8P28062 276 aa16.17■□□□□ 0.18
SDCBP-209ENST00000522243 TMEM50BP56557 158 aa16.17■□□□□ 0.18
SDCBP-209ENST00000522243 HLA-DRB3P79483 266 aa16.17■□□□□ 0.18
SDCBP-209ENST00000522243 C5orf64Q2M2E5 130 aa16.17■□□□□ 0.18
SDCBP-209ENST00000522243 IZUMO2Q6UXV1 221 aa16.17■□□□□ 0.18
SDCBP-209ENST00000522243 MOB1BQ7L9L4 216 aa16.17■□□□□ 0.18
SDCBP-209ENST00000522243 ARHGAP5-AS1Q96IT6 56 aa16.17■□□□□ 0.18
SDCBP-209ENST00000522243 CNBD2Q96M20 576 aa16.17■□□□□ 0.18
SDCBP-209ENST00000522243 KLK15Q9H2R5 256 aa16.17■□□□□ 0.18
SDCBP-209ENST00000522243 RIMS4Q9H426 269 aaPredicted RBP16.17■□□□□ 0.18
SDCBP-209ENST00000522243 KIAA1456Q9P272 454 aa16.17■□□□□ 0.18
SDCBP-209ENST00000522243 TRBV6-6A0A0A6YYG2 114 aa16.16■□□□□ 0.18
SDCBP-209ENST00000522243 FOXI3A8MTJ6 420 aaPredicted RBP16.16■□□□□ 0.18
SDCBP-209ENST00000522243 RAB29O14966 203 aa16.16■□□□□ 0.18
SDCBP-209ENST00000522243 HLA-DRB1P01911 266 aa16.16■□□□□ 0.18
SDCBP-209ENST00000522243 CT45A6P0DMU7 189 aa16.16■□□□□ 0.18
SDCBP-209ENST00000522243 CT45A5P0DMU8 189 aa16.16■□□□□ 0.18
SDCBP-209ENST00000522243 CT45A7P0DMV0 189 aa16.16■□□□□ 0.18
SDCBP-209ENST00000522243 OR5H8P0DN80 308 aa16.16■□□□□ 0.18
SDCBP-209ENST00000522243 PSMA1P25786 263 aaKnown RBP16.16■□□□□ 0.18
SDCBP-209ENST00000522243 CEACAM6P40199 344 aa16.16■□□□□ 0.18
SDCBP-209ENST00000522243 C2orf76Q3KRA6 126 aa16.16■□□□□ 0.18
SDCBP-209ENST00000522243 HES5Q5TA89 166 aa16.16■□□□□ 0.18
SDCBP-209ENST00000522243 LIN54Q6MZP7 749 aa16.16■□□□□ 0.18
SDCBP-209ENST00000522243 NPBQ8NG41 125 aa16.16■□□□□ 0.18
SDCBP-209ENST00000522243 FAM3DQ96BQ1 224 aa16.16■□□□□ 0.18
SDCBP-209ENST00000522243 PECRQ9BY49 303 aa16.16■□□□□ 0.18
SDCBP-209ENST00000522243 FBXL15Q9H469 300 aa16.16■□□□□ 0.18
SDCBP-209ENST00000522243 ZNF580Q9UK33 172 aa16.16■□□□□ 0.18
SDCBP-209ENST00000522243 HSPA12AO43301 675 aa16.15■□□□□ 0.18
SDCBP-209ENST00000522243 PPIFP30405 207 aaKnown RBP16.15■□□□□ 0.18
SDCBP-209ENST00000522243 LUMP51884 338 aaPredicted RBP16.15■□□□□ 0.18
SDCBP-209ENST00000522243 PLA2G7Q13093 441 aa16.15■□□□□ 0.18
SDCBP-209ENST00000522243 FAM71F2Q6NXP2 309 aa16.15■□□□□ 0.18
SDCBP-209ENST00000522243 OR5M8Q8NGP6 311 aa16.15■□□□□ 0.18
SDCBP-209ENST00000522243 C4orf3Q8WVX3 66 aa16.15■□□□□ 0.18
SDCBP-209ENST00000522243 OR5B12Q96R08 314 aa16.15■□□□□ 0.18
SDCBP-209ENST00000522243 CMSS1Q9BQ75 279 aaKnown RBP16.15■□□□□ 0.18
SDCBP-209ENST00000522243 C11orf54Q9H0W9 315 aaPredicted RBP16.15■□□□□ 0.18
SDCBP-209ENST00000522243 VCX3BQ9H321 246 aa16.15■□□□□ 0.18
SDCBP-209ENST00000522243 Q9N2K0 584 aa16.15■□□□□ 0.18
SDCBP-209ENST00000522243 RNF150Q9ULK6 438 aa16.15■□□□□ 0.18
SDCBP-209ENST00000522243 HSF4Q9ULV5 492 aa16.15■□□□□ 0.18
SDCBP-209ENST00000522243 V9GY05 133 aa16.15■□□□□ 0.18
SDCBP-209ENST00000522243 DNAH3Q8TD57 4116 aa16.15■□□□□ 0.18
SDCBP-209ENST00000522243 TRAV41A0A0B4J266 112 aa16.14■□□□□ 0.17
SDCBP-209ENST00000522243 NDUFA3O95167 84 aa16.14■□□□□ 0.17
SDCBP-209ENST00000522243 ZBTB25P24278 435 aa16.14■□□□□ 0.17
SDCBP-209ENST00000522243 PLAC9Q5JTB6 97 aa16.14■□□□□ 0.17
SDCBP-209ENST00000522243 TMEM65Q6PI78 240 aa16.14■□□□□ 0.17
SDCBP-209ENST00000522243 OR11H1Q8NG94 326 aa16.14■□□□□ 0.17
SDCBP-209ENST00000522243 GNB4Q9HAV0 340 aa16.14■□□□□ 0.17
SDCBP-209ENST00000522243 C12orf4Q9NQ89 552 aa16.14■□□□□ 0.17
SDCBP-209ENST00000522243 TMEM272A0A1B0GTI8 110 aa16.13■□□□□ 0.17
SDCBP-209ENST00000522243 ERICH4A6NGS2 130 aa16.13■□□□□ 0.17
SDCBP-209ENST00000522243 H7C2Y5 167 aa16.13■□□□□ 0.17
SDCBP-209ENST00000522243 DENRO43583 198 aaKnown RBP16.13■□□□□ 0.17
SDCBP-209ENST00000522243 GSTP1P09211 210 aaKnown RBP16.13■□□□□ 0.17
SDCBP-209ENST00000522243 DGCR2P98153 550 aa16.13■□□□□ 0.17
SDCBP-209ENST00000522243 NDPQ00604 133 aa16.13■□□□□ 0.17
SDCBP-209ENST00000522243 KIAA0141Q14154 515 aaPredicted RBP16.13■□□□□ 0.17
SDCBP-209ENST00000522243 PLGLAQ15195 96 aa16.13■□□□□ 0.17
SDCBP-209ENST00000522243 SSX1Q16384 188 aa16.13■□□□□ 0.17
SDCBP-209ENST00000522243 ECSCRQ19T08 205 aa16.13■□□□□ 0.17
SDCBP-209ENST00000522243 C11orf87Q6NUJ2 197 aa16.13■□□□□ 0.17
SDCBP-209ENST00000522243 DRAXINQ8NBI3 349 aaPredicted RBP16.13■□□□□ 0.17
SDCBP-209ENST00000522243 CHCHD6Q9BRQ6 235 aa16.13■□□□□ 0.17
SDCBP-209ENST00000522243 AGMATQ9BSE5 352 aa16.13■□□□□ 0.17
SDCBP-209ENST00000522243 ACOT13Q9NPJ3 140 aa16.13■□□□□ 0.17
SDCBP-209ENST00000522243 FBXO7Q9Y3I1 522 aa16.13■□□□□ 0.17
SDCBP-209ENST00000522243 OR5H14A6NHG9 310 aa16.12■□□□□ 0.17
SDCBP-209ENST00000522243 H0YJW9 148 aa16.12■□□□□ 0.17
SDCBP-209ENST00000522243 ITGB1BP1O14713 200 aa16.12■□□□□ 0.17
SDCBP-209ENST00000522243 RRHO14718 337 aa16.12■□□□□ 0.17
SDCBP-209ENST00000522243 LDLRAD4O15165 306 aa16.12■□□□□ 0.17
SDCBP-209ENST00000522243 OR10A3P58181 314 aa16.12■□□□□ 0.17
SDCBP-209ENST00000522243 LINC00205P59089 165 aa16.12■□□□□ 0.17
SDCBP-209ENST00000522243 TBCEQ15813 527 aaPredicted RBP16.12■□□□□ 0.17
SDCBP-209ENST00000522243 ZNF491Q8N8L2 437 aa16.12■□□□□ 0.17
SDCBP-209ENST00000522243 OR56B1Q8NGI3 324 aa16.12■□□□□ 0.17
SDCBP-209ENST00000522243 MYOZ3Q8TDC0 251 aa16.12■□□□□ 0.17
SDCBP-209ENST00000522243 EDARADDQ8WWZ3 215 aa16.12■□□□□ 0.17
SDCBP-209ENST00000522243 MGAT4AQ9UM21 535 aa16.12■□□□□ 0.17
SDCBP-209ENST00000522243 WASHC3Q9Y3C0 194 aa16.12■□□□□ 0.17
SDCBP-209ENST00000522243 IGKV1-6A0A0C4DH72 117 aa16.11■□□□□ 0.17
SDCBP-209ENST00000522243 SHISA3A0PJX4 238 aa16.11■□□□□ 0.17
SDCBP-209ENST00000522243 SEC14L6B5MCN3 397 aa16.11■□□□□ 0.17
SDCBP-209ENST00000522243 FCN1O00602 326 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms