RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 SLC25A48Q6ZT89 311 aaKnown RBP17.47■□□□□ 0.39
R3HCC1-208ENST00000522012 DRAM1Q8N682 238 aa17.47■□□□□ 0.39
R3HCC1-208ENST00000522012 CCDC71LQ8N9Z2 235 aa17.47■□□□□ 0.39
R3HCC1-208ENST00000522012 OR52B4Q8NGK2 314 aa17.47■□□□□ 0.39
R3HCC1-208ENST00000522012 FAM216AQ8WUB2 273 aa17.47■□□□□ 0.39
R3HCC1-208ENST00000522012 AKR1E2Q96JD6 320 aa17.47■□□□□ 0.39
R3HCC1-208ENST00000522012 IFI27L2Q9H2X8 130 aa17.47■□□□□ 0.39
R3HCC1-208ENST00000522012 GPN1Q9HCN4 374 aaPredicted RBP17.47■□□□□ 0.39
R3HCC1-208ENST00000522012 POLQO75417 2590 aa17.47■□□□□ 0.39
R3HCC1-208ENST00000522012 ABCA12Q86UK0 2595 aa17.47■□□□□ 0.39
R3HCC1-208ENST00000522012 B4DSR2 109 aa17.47■□□□□ 0.39
R3HCC1-208ENST00000522012 TOR1AO14656 332 aa17.47■□□□□ 0.39
R3HCC1-208ENST00000522012 SLC22A5O76082 557 aa17.47■□□□□ 0.39
R3HCC1-208ENST00000522012 IGLV2-14P01704 120 aa17.47■□□□□ 0.39
R3HCC1-208ENST00000522012 PRTN3P24158 256 aa17.47■□□□□ 0.39
R3HCC1-208ENST00000522012 PPP1R1AQ13522 171 aa17.47■□□□□ 0.39
R3HCC1-208ENST00000522012 Q3ZCU0 254 aa17.47■□□□□ 0.39
R3HCC1-208ENST00000522012 FAHD2BQ6P2I3 314 aaPredicted RBP17.47■□□□□ 0.39
R3HCC1-208ENST00000522012 LYG1Q8N1E2 194 aa17.47■□□□□ 0.39
R3HCC1-208ENST00000522012 BVESQ8NE79 360 aa17.47■□□□□ 0.39
R3HCC1-208ENST00000522012 WFDC11Q8NEX6 87 aa17.47■□□□□ 0.39
R3HCC1-208ENST00000522012 RTN4IP1Q8WWV3 396 aaPredicted RBP17.47■□□□□ 0.39
R3HCC1-208ENST00000522012 FAHD2AQ96GK7 314 aa17.47■□□□□ 0.39
R3HCC1-208ENST00000522012 GPHA2Q96T91 129 aa17.47■□□□□ 0.39
R3HCC1-208ENST00000522012 ZNRD1Q9P1U0 126 aa17.47■□□□□ 0.39
R3HCC1-208ENST00000522012 INSIG2Q9Y5U4 225 aa17.47■□□□□ 0.39
R3HCC1-208ENST00000522012 IGHV2-26A0A0B4J1V2 119 aa17.46■□□□□ 0.39
R3HCC1-208ENST00000522012 J3QR06 171 aa17.46■□□□□ 0.39
R3HCC1-208ENST00000522012 PGLYRP1O75594 196 aaPredicted RBP17.46■□□□□ 0.39
R3HCC1-208ENST00000522012 VMO1Q7Z5L0 202 aa17.46■□□□□ 0.39
R3HCC1-208ENST00000522012 SGPP2Q8IWX5 399 aa17.46■□□□□ 0.39
R3HCC1-208ENST00000522012 OR13D1Q8NGV5 346 aa17.46■□□□□ 0.39
R3HCC1-208ENST00000522012 OR9G1Q8NH87 305 aa17.46■□□□□ 0.39
R3HCC1-208ENST00000522012 C1orf159Q96HA4 380 aa17.46■□□□□ 0.39
R3HCC1-208ENST00000522012 PCGF1Q9BSM1 259 aa17.46■□□□□ 0.39
R3HCC1-208ENST00000522012 SIRPDQ9H106 197 aa17.46■□□□□ 0.39
R3HCC1-208ENST00000522012 APCP25054 2843 aa17.46■□□□□ 0.38
R3HCC1-208ENST00000522012 CRYM-AS1A6NIL9 109 aa17.45■□□□□ 0.38
R3HCC1-208ENST00000522012 MPPED1O15442 326 aa17.45■□□□□ 0.38
R3HCC1-208ENST00000522012 TOX4O94842 621 aa17.45■□□□□ 0.38
R3HCC1-208ENST00000522012 HLA-AP01891 365 aaKnown RBP17.45■□□□□ 0.38
R3HCC1-208ENST00000522012 CD34P28906 385 aa17.45■□□□□ 0.38
R3HCC1-208ENST00000522012 UBE2MP61081 183 aaKnown RBP17.45■□□□□ 0.38
R3HCC1-208ENST00000522012 DHODHQ02127 395 aa17.45■□□□□ 0.38
R3HCC1-208ENST00000522012 TBC1D26Q86UD7 250 aa17.45■□□□□ 0.38
R3HCC1-208ENST00000522012 PNKDQ8N490 385 aa17.45■□□□□ 0.38
R3HCC1-208ENST00000522012 LINC01356Q8N9X3 169 aa17.45■□□□□ 0.38
R3HCC1-208ENST00000522012 OR10X1Q8NGY0 326 aa17.45■□□□□ 0.38
R3HCC1-208ENST00000522012 CLEC7AQ9BXN2 247 aa17.45■□□□□ 0.38
R3HCC1-208ENST00000522012 HEXA-AS1Q9H8Q6 139 aa17.45■□□□□ 0.38
R3HCC1-208ENST00000522012 SDHAF2Q9NX18 166 aa17.45■□□□□ 0.38
R3HCC1-208ENST00000522012 C9orf170A2RU37 121 aa17.44■□□□□ 0.38
R3HCC1-208ENST00000522012 C7orf66A4D0T2 115 aa17.44■□□□□ 0.38
R3HCC1-208ENST00000522012 RAB29O14966 203 aa17.44■□□□□ 0.38
R3HCC1-208ENST00000522012 PRRX1P54821 245 aa17.44■□□□□ 0.38
R3HCC1-208ENST00000522012 RND3P61587 244 aa17.44■□□□□ 0.38
R3HCC1-208ENST00000522012 DHRS2Q13268 280 aa17.44■□□□□ 0.38
R3HCC1-208ENST00000522012 LYG2Q86SG7 212 aa17.44■□□□□ 0.38
R3HCC1-208ENST00000522012 C8orf31Q8N9H6 132 aa17.44■□□□□ 0.38
R3HCC1-208ENST00000522012 ZBTB34Q8NCN2 500 aa17.44■□□□□ 0.38
R3HCC1-208ENST00000522012 ZNF431Q8TF32 576 aaPredicted RBP17.44■□□□□ 0.38
R3HCC1-208ENST00000522012 CASTOR1Q8WTX7 329 aa17.44■□□□□ 0.38
R3HCC1-208ENST00000522012 C5orf30Q96GV9 206 aa17.44■□□□□ 0.38
R3HCC1-208ENST00000522012 OR51J1Q9H342 316 aa17.44■□□□□ 0.38
R3HCC1-208ENST00000522012 GHITMQ9H3K2 345 aa17.44■□□□□ 0.38
R3HCC1-208ENST00000522012 NAA60Q9H7X0 242 aa17.44■□□□□ 0.38
R3HCC1-208ENST00000522012 CREBL2O60519 120 aaPredicted RBP17.43■□□□□ 0.38
R3HCC1-208ENST00000522012 SUPT4H1P63272 117 aaKnown RBP17.43■□□□□ 0.38
R3HCC1-208ENST00000522012 KLRD1Q13241 179 aa17.43■□□□□ 0.38
R3HCC1-208ENST00000522012 SLC9A3R2Q15599 337 aa17.43■□□□□ 0.38
R3HCC1-208ENST00000522012 MSMO1Q15800 293 aa17.43■□□□□ 0.38
R3HCC1-208ENST00000522012 RPL39P5Q59GN2 51 aa17.43■□□□□ 0.38
R3HCC1-208ENST00000522012 DCAF12L2Q5VW00 463 aa17.43■□□□□ 0.38
R3HCC1-208ENST00000522012 C11orf88Q6PI97 169 aa17.43■□□□□ 0.38
R3HCC1-208ENST00000522012 LINC00311Q8N616 119 aa17.43■□□□□ 0.38
R3HCC1-208ENST00000522012 PIPOXQ9P0Z9 390 aa17.43■□□□□ 0.38
R3HCC1-208ENST00000522012 ITGB1BP2Q9UKP3 347 aa17.43■□□□□ 0.38
R3HCC1-208ENST00000522012 KCNIP3Q9Y2W7 256 aa17.43■□□□□ 0.38
R3HCC1-208ENST00000522012 CSMD2Q7Z408 3487 aa17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 SAA2-SAA4A0A096LPE2 208 aa17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 SNRPGP15A8MWD9 76 aa17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 SFT2D2O95562 160 aa17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 SAA2P0DJI9 122 aaPredicted RBP17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 PAX8Q06710 450 aa17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 ZNF626Q68DY1 528 aa17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 ODF3L1Q8IXM7 274 aa17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 PDZD9Q8IXQ8 264 aa17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 OR51H1Q8NH63 302 aa17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 ZNF596Q8TC21 504 aa17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 HIF1ANQ9NWT6 349 aa17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 DSCAML1Q8TD84 2053 aa17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 TRAV20A0A0B4J274 112 aa17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 C3orf85A0A1B0GTC6 90 aa17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 M0R1X1 148 aa17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 SSNA1O43805 119 aa17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 IFNA2P01563 188 aa17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 MMP9P14780 707 aa17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 ZNF16P17020 682 aaPredicted RBP17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 SP6Q3SY56 376 aa17.42■□□□□ 0.38
R3HCC1-208ENST00000522012 CADM3Q8N126 398 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms