RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 TGFBR1P36897 503 aa2.38□□□□□ -2.03
SQLE-204ENST00000520493 HSPA9P38646 679 aaKnown RBP2.38□□□□□ -2.03
SQLE-204ENST00000520493 CAPZBP47756 277 aa2.38□□□□□ -2.03
SQLE-204ENST00000520493 OR4D2P58180 307 aa2.38□□□□□ -2.03
SQLE-204ENST00000520493 SNAP25P60880 206 aa2.38□□□□□ -2.03
SQLE-204ENST00000520493 HLA-DRB3P79483 266 aa2.38□□□□□ -2.03
SQLE-204ENST00000520493 RSU1Q15404 277 aa2.38□□□□□ -2.03
SQLE-204ENST00000520493 SPIN3Q5JUX0 258 aa2.38□□□□□ -2.03
SQLE-204ENST00000520493 FAM78BQ5VT40 261 aa2.38□□□□□ -2.03
SQLE-204ENST00000520493 ZNF880Q6PDB4 577 aa2.38□□□□□ -2.03
SQLE-204ENST00000520493 NEGR1Q7Z3B1 354 aa2.38□□□□□ -2.03
SQLE-204ENST00000520493 TMEM144Q7Z5S9 345 aa2.38□□□□□ -2.03
SQLE-204ENST00000520493 C1orf158Q8N1D5 194 aa2.38□□□□□ -2.03
SQLE-204ENST00000520493 LRRC25Q8N386 305 aaPredicted RBP2.38□□□□□ -2.03
SQLE-204ENST00000520493 RPRMLQ8N4K4 120 aa2.38□□□□□ -2.03
SQLE-204ENST00000520493 C3orf22Q8N5N4 141 aa2.38□□□□□ -2.03
SQLE-204ENST00000520493 NAV1Q8NEY1 1877 aa2.38□□□□□ -2.03
SQLE-204ENST00000520493 KLF14Q8TD94 323 aaPredicted RBP2.38□□□□□ -2.03
SQLE-204ENST00000520493 Q8WTZ3 238 aa2.38□□□□□ -2.03
SQLE-204ENST00000520493 MAL2Q969L2 176 aa2.38□□□□□ -2.03
SQLE-204ENST00000520493 C9orf16Q9BUW7 83 aa2.38□□□□□ -2.03
SQLE-204ENST00000520493 RPRD2Q5VT52 1461 aaKnown RBP2.38□□□□□ -2.03
SQLE-204ENST00000520493 FLT4P35916 1363 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 ZFYVE9O95405 1425 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 ARID1AO14497 2285 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 IGLV3-12A0A075B6K2 115 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 LRCOL1A6NCL2 159 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 CLDN24A6NM45 220 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 DISC1C4P0D8 188 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 FADS1O60427 444 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 IGLV3-27P01718 113 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 TNNC2P02585 160 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 IGLV7-43P04211 117 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 CDK2P24941 298 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 OR1E2P47887 323 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 MAPK14Q16539 360 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 HIST2H3PS2Q5TEC6 136 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 C16orf47Q6ZP98 133 aaPredicted RBP2.37□□□□□ -2.03
SQLE-204ENST00000520493 ZNF550Q7Z398 422 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 DAZ4Q86SG3 579 aaKnown RBP2.37□□□□□ -2.03
SQLE-204ENST00000520493 CLDN22Q8N7P3 220 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 PHOSPHO2Q8TCD6 241 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 ABHD14BQ96IU4 210 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 ANKRD36BP1Q96IX9 119 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 EBNA1BP2Q99848 306 aaKnown RBP2.37□□□□□ -2.03
SQLE-204ENST00000520493 MED18Q9BUE0 208 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 TLNRD1Q9H1K6 362 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 MED28Q9H204 178 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 DAZ1Q9NQZ3 744 aaKnown RBP2.37□□□□□ -2.03
SQLE-204ENST00000520493 CYTL1Q9NRR1 136 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 FIS1Q9Y3D6 152 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 PCYT1BQ9Y5K3 369 aaPredicted RBP2.37□□□□□ -2.03
SQLE-204ENST00000520493 TRAPPC1Q9Y5R8 145 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 COL6A3P12111 3177 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 ADGRL1O94910 1474 aa2.37□□□□□ -2.03
SQLE-204ENST00000520493 CHD6Q8TD26 2715 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 NCOA1Q15788 1441 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 FBN3Q75N90 2809 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 EVPLLA8MZ36 301 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 DEDDO75618 318 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 STK16O75716 305 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 OR5F1O95221 314 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 GYPCP04921 128 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 CGB3P0DN86 165 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 CGB7P0DN87 165 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 ORM2P19652 201 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 S100A2P29034 98 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 OPRM1P35372 400 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 MARCKSL1P49006 195 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 HERVK_113P63121 156 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 SPA17Q15506 151 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 ZFAND6Q6FIF0 208 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 SLC25A34Q6PIV7 304 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 FAM131AQ6UXB0 335 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 ATP5L2Q7Z4Y8 100 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 ZNF567Q8N184 647 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 OR4A5Q8NH83 315 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 RMI2Q96E14 147 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 LINC00477Q96M19 166 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 PLA2G12AQ9BZM1 189 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 OR2D2Q9H210 308 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 ZNF286AQ9HBT8 521 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 ZNF586Q9NXT0 402 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 TTC21AQ8NDW8 1320 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 CEP170Q5SW79 1584 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 KIF15Q9NS87 1388 aa2.36□□□□□ -2.03
SQLE-204ENST00000520493 NUP205Q92621 2012 aa2.35□□□□□ -2.03
SQLE-204ENST00000520493 SCN4AP35499 1836 aa2.35□□□□□ -2.03
SQLE-204ENST00000520493 THSD7AQ9UPZ6 1657 aa2.35□□□□□ -2.03
SQLE-204ENST00000520493 FLNBO75369 2602 aaKnown RBP2.35□□□□□ -2.03
SQLE-204ENST00000520493 A0A1B0GV50 99 aa2.35□□□□□ -2.03
SQLE-204ENST00000520493 FSTL3O95633 263 aa2.35□□□□□ -2.03
SQLE-204ENST00000520493 MT-CO2P00403 227 aa2.35□□□□□ -2.03
SQLE-204ENST00000520493 REG1AP05451 166 aa2.35□□□□□ -2.03
SQLE-204ENST00000520493 GUSBP08236 651 aa2.35□□□□□ -2.03
SQLE-204ENST00000520493 CD36P16671 472 aa2.35□□□□□ -2.03
SQLE-204ENST00000520493 LINC00313P59037 77 aa2.35□□□□□ -2.03
SQLE-204ENST00000520493 LINC00315P59091 139 aa2.35□□□□□ -2.03
SQLE-204ENST00000520493 SPCS3P61009 180 aa2.35□□□□□ -2.03
SQLE-204ENST00000520493 GLO1Q04760 184 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms