RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 USF2Q15853 346 aaPredicted RBP-2.64□□□□□ -2.83
SNORA40.13-201ENST00000516379 ANKDD1AQ495B1 522 aa-2.64□□□□□ -2.83
SNORA40.13-201ENST00000516379 ZNF675Q8TD23 568 aa-2.64□□□□□ -2.83
SNORA40.13-201ENST00000516379 OR2M4Q96R27 311 aa-2.64□□□□□ -2.83
SNORA40.13-201ENST00000516379 THUMPD2Q9BTF0 503 aaKnown RBP-2.64□□□□□ -2.83
SNORA40.13-201ENST00000516379 C11orf49Q9H6J7 331 aa-2.64□□□□□ -2.83
SNORA40.13-201ENST00000516379 TMEM185BQ9H7F4 350 aa-2.64□□□□□ -2.83
SNORA40.13-201ENST00000516379 ACER3Q9NUN7 267 aa-2.64□□□□□ -2.83
SNORA40.13-201ENST00000516379 KIF3AQ9Y496 699 aa-2.64□□□□□ -2.83
SNORA40.13-201ENST00000516379 LAMA2P24043 3122 aaKnown RBP-2.64□□□□□ -2.83
SNORA40.13-201ENST00000516379 CHD8Q9HCK8 2581 aa-2.64□□□□□ -2.83
SNORA40.13-201ENST00000516379 TRBV30A0A0K0K1B3 111 aa-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 A0A1B0GXF2 115 aa-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 LGALS1P09382 135 aaKnown RBP-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 CD7P09564 240 aa-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 GRPRP30550 384 aa-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 TAS2R30P59541 319 aa-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 RAB4BP61018 213 aa-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 RAB10P61026 200 aa-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 PDE6HQ13956 83 aa-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 ZNF345Q14585 488 aa-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 PDK3Q15120 406 aa-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 MRPL23Q16540 153 aaKnown RBP-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 CEP55Q53EZ4 464 aa-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 PRAMEF5Q5TYX0 476 aa-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 PRAMEF6Q5VXH4 476 aa-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 SLC8B1Q6J4K2 584 aa-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 EBLN2Q6P2I7 272 aa-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 FAM19A3Q7Z5A8 133 aa-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 CCDC110Q8TBZ0 833 aa-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 TMEM234Q8WY98 164 aa-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 TMA16Q96EY4 203 aaKnown RBP-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 C11orf70Q9BRQ4 267 aa-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 SLC7A5P2Q9GIP4 190 aa-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 CHST6Q9GZX3 395 aa-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 TMEM222Q9H0R3 208 aa-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 RWDD1Q9H446 243 aaPredicted RBP-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 TAAR3PQ9P1P4 343 aa-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 POMPQ9Y244 141 aa-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 RBBP6Q7Z6E9 1792 aaKnown RBP-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 BCORL1Q5H9F3 1711 aa-2.65□□□□□ -2.83
SNORA40.13-201ENST00000516379 TRAV38-1A0A0B4J264 116 aa-2.66□□□□□ -2.84
SNORA40.13-201ENST00000516379 KBTBD11-OT1A0A1B0GTJ5 212 aa-2.66□□□□□ -2.84
SNORA40.13-201ENST00000516379 ZNF879B4DU55 563 aa-2.66□□□□□ -2.84
SNORA40.13-201ENST00000516379 TXNDC9O14530 226 aa-2.66□□□□□ -2.84
SNORA40.13-201ENST00000516379 KLF7O75840 302 aaPredicted RBP-2.66□□□□□ -2.84
SNORA40.13-201ENST00000516379 MYO1DO94832 1006 aa-2.66□□□□□ -2.84
SNORA40.13-201ENST00000516379 GFAPP14136 432 aa-2.66□□□□□ -2.84
SNORA40.13-201ENST00000516379 SERPINB9P50453 376 aa-2.66□□□□□ -2.84
SNORA40.13-201ENST00000516379 FGF12P61328 243 aa-2.66□□□□□ -2.84
SNORA40.13-201ENST00000516379 HIST1H4AP62805 103 aaKnown RBP-2.66□□□□□ -2.84
SNORA40.13-201ENST00000516379 TTC29Q8NA56 475 aaPredicted RBP-2.66□□□□□ -2.84
SNORA40.13-201ENST00000516379 OR10AC1Q8NH08 325 aa-2.66□□□□□ -2.84
SNORA40.13-201ENST00000516379 TESCQ96BS2 214 aa-2.66□□□□□ -2.84
SNORA40.13-201ENST00000516379 SPACA1Q9HBV2 294 aa-2.66□□□□□ -2.84
SNORA40.13-201ENST00000516379 H3BP45 60 aa-2.67□□□□□ -2.84
SNORA40.13-201ENST00000516379 ATP6V0CP27449 155 aa-2.67□□□□□ -2.84
SNORA40.13-201ENST00000516379 RRM2P31350 389 aa-2.67□□□□□ -2.84
SNORA40.13-201ENST00000516379 RBM11P57052 281 aaKnown RBP-2.67□□□□□ -2.84
SNORA40.13-201ENST00000516379 PDK2Q15119 407 aa-2.67□□□□□ -2.84
SNORA40.13-201ENST00000516379 FAM27BQ5VT28 67 aa-2.67□□□□□ -2.84
SNORA40.13-201ENST00000516379 NT5CQ8TCD5 201 aa-2.67□□□□□ -2.84
SNORA40.13-201ENST00000516379 ATP6V1E2Q96A05 226 aa-2.67□□□□□ -2.84
SNORA40.13-201ENST00000516379 LRRC39Q96DD0 335 aa-2.67□□□□□ -2.84
SNORA40.13-201ENST00000516379 IMMP2LQ96T52 175 aa-2.67□□□□□ -2.84
SNORA40.13-201ENST00000516379 UCK2Q9BZX2 261 aa-2.67□□□□□ -2.84
SNORA40.13-201ENST00000516379 RMND5AQ9H871 391 aa-2.67□□□□□ -2.84
SNORA40.13-201ENST00000516379 CD209Q9NNX6 404 aa-2.67□□□□□ -2.84
SNORA40.13-201ENST00000516379 NMRK1Q9NWW6 199 aa-2.67□□□□□ -2.84
SNORA40.13-201ENST00000516379 HHLA2Q9UM44 414 aa-2.67□□□□□ -2.84
SNORA40.13-201ENST00000516379 TBL2Q9Y4P3 447 aaKnown RBP-2.67□□□□□ -2.84
SNORA40.13-201ENST00000516379 RBM7Q9Y580 266 aaKnown RBP-2.67□□□□□ -2.84
SNORA40.13-201ENST00000516379 ATRQ13535 2644 aa-2.68□□□□□ -2.84
SNORA40.13-201ENST00000516379 TCAPO15273 167 aa-2.68□□□□□ -2.84
SNORA40.13-201ENST00000516379 ATP8B1O43520 1251 aa-2.68□□□□□ -2.84
SNORA40.13-201ENST00000516379 PPBPP02775 128 aa-2.68□□□□□ -2.84
SNORA40.13-201ENST00000516379 TNNI1P19237 187 aa-2.68□□□□□ -2.84
SNORA40.13-201ENST00000516379 ARL2P36404 184 aa-2.68□□□□□ -2.84
SNORA40.13-201ENST00000516379 GABRA2P47869 451 aa-2.68□□□□□ -2.84
SNORA40.13-201ENST00000516379 UBE2MP61081 183 aaKnown RBP-2.68□□□□□ -2.84
SNORA40.13-201ENST00000516379 THOC7Q6I9Y2 204 aaKnown RBP-2.68□□□□□ -2.84
SNORA40.13-201ENST00000516379 CASTOR1Q8WTX7 329 aa-2.68□□□□□ -2.84
SNORA40.13-201ENST00000516379 XPO6Q96QU8 1125 aaKnown RBP-2.68□□□□□ -2.84
SNORA40.13-201ENST00000516379 EBNA1BP2Q99848 306 aaKnown RBP-2.68□□□□□ -2.84
SNORA40.13-201ENST00000516379 COMMD5Q9GZQ3 224 aa-2.68□□□□□ -2.84
SNORA40.13-201ENST00000516379 METTL17Q9H7H0 456 aaPredicted RBP-2.68□□□□□ -2.84
SNORA40.13-201ENST00000516379 KLF12Q9Y4X4 402 aa-2.68□□□□□ -2.84
SNORA40.13-201ENST00000516379 ESPL1Q14674 2120 aa-2.68□□□□□ -2.84
SNORA40.13-201ENST00000516379 PRKDCP78527 4128 aaKnown RBP-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 SMIM9A6NGZ8 99 aa-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 GOLGA6L19H0YKK7 550 aa-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 EIF3HO15372 352 aaKnown RBP eCLIP-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 FADS1O60427 444 aa-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 OR1I1O60431 355 aa-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 TIMM17BO60830 172 aa-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 HLA-HP01893 362 aa-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 PMP2P02689 132 aa-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 FBP1P09467 338 aa-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 TSPOP30536 169 aa-2.69□□□□□ -2.84
SNORA40.13-201ENST00000516379 ALDH3A1P30838 453 aa-2.69□□□□□ -2.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms