RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 CDC42SE1Q9NRR8 79 aa-2□□□□□ -2.73
SCARNA23-201ENST00000516060 MCUBQ9NWR8 336 aa-2□□□□□ -2.73
SCARNA23-201ENST00000516060 CHD6Q8TD26 2715 aa-2□□□□□ -2.73
SCARNA23-201ENST00000516060 TXNDC9O14530 226 aa-2.01□□□□□ -2.73
SCARNA23-201ENST00000516060 TCAPO15273 167 aa-2.01□□□□□ -2.73
SCARNA23-201ENST00000516060 DNAL4O96015 105 aa-2.01□□□□□ -2.73
SCARNA23-201ENST00000516060 HSP90AA1P07900 732 aaKnown RBP-2.01□□□□□ -2.73
SCARNA23-201ENST00000516060 PSMB8P28062 276 aa-2.01□□□□□ -2.73
SCARNA23-201ENST00000516060 TAS2R30P59541 319 aa-2.01□□□□□ -2.73
SCARNA23-201ENST00000516060 PAFAH1B3Q15102 231 aaKnown RBP-2.01□□□□□ -2.73
SCARNA23-201ENST00000516060 PDK2Q15119 407 aa-2.01□□□□□ -2.73
SCARNA23-201ENST00000516060 USF2Q15853 346 aaPredicted RBP-2.01□□□□□ -2.73
SCARNA23-201ENST00000516060 HSDL1Q3SXM5 330 aa-2.01□□□□□ -2.73
SCARNA23-201ENST00000516060 IDNKQ5T6J7 187 aa-2.01□□□□□ -2.73
SCARNA23-201ENST00000516060 EBLN2Q6P2I7 272 aa-2.01□□□□□ -2.73
SCARNA23-201ENST00000516060 ITFG1Q8TB96 612 aa-2.01□□□□□ -2.73
SCARNA23-201ENST00000516060 CASTOR1Q8WTX7 329 aa-2.01□□□□□ -2.73
SCARNA23-201ENST00000516060 PPWD1Q96BP3 646 aaKnown RBP-2.01□□□□□ -2.73
SCARNA23-201ENST00000516060 TMA16Q96EY4 203 aaKnown RBP-2.01□□□□□ -2.73
SCARNA23-201ENST00000516060 KIFC1Q9BW19 673 aa-2.01□□□□□ -2.73
SCARNA23-201ENST00000516060 NDEL1Q9GZM8 345 aa-2.01□□□□□ -2.73
SCARNA23-201ENST00000516060 POLE3Q9NRF9 147 aa-2.01□□□□□ -2.73
SCARNA23-201ENST00000516060 NMRK1Q9NWW6 199 aa-2.01□□□□□ -2.73
SCARNA23-201ENST00000516060 TAAR3PQ9P1P4 343 aa-2.01□□□□□ -2.73
SCARNA23-201ENST00000516060 ACTR3BQ9P1U1 418 aa-2.01□□□□□ -2.73
SCARNA23-201ENST00000516060 KLF12Q9Y4X4 402 aa-2.01□□□□□ -2.73
SCARNA23-201ENST00000516060 PLXNA4Q9HCM2 1894 aa-2.02□□□□□ -2.73
SCARNA23-201ENST00000516060 TRBV6-8A0A0A6YYG3 113 aa-2.02□□□□□ -2.73
SCARNA23-201ENST00000516060 TRAV38-1A0A0B4J264 116 aa-2.02□□□□□ -2.73
SCARNA23-201ENST00000516060 AKR7A2O43488 359 aa-2.02□□□□□ -2.73
SCARNA23-201ENST00000516060 HLA-HP01893 362 aa-2.02□□□□□ -2.73
SCARNA23-201ENST00000516060 LGALS1P09382 135 aaKnown RBP-2.02□□□□□ -2.73
SCARNA23-201ENST00000516060 CCL4P13236 92 aa-2.02□□□□□ -2.73
SCARNA23-201ENST00000516060 ATP6V0CP27449 155 aa-2.02□□□□□ -2.73
SCARNA23-201ENST00000516060 RAB25P57735 213 aa-2.02□□□□□ -2.73
SCARNA23-201ENST00000516060 HIST1H4AP62805 103 aaKnown RBP-2.02□□□□□ -2.73
SCARNA23-201ENST00000516060 CCDC152Q4G0S7 254 aa-2.02□□□□□ -2.73
SCARNA23-201ENST00000516060 AADACL4Q5VUY2 407 aa-2.02□□□□□ -2.73
SCARNA23-201ENST00000516060 EPGNQ6UW88 154 aa-2.02□□□□□ -2.73
SCARNA23-201ENST00000516060 PIH1D2Q8WWB5 315 aa-2.02□□□□□ -2.73
SCARNA23-201ENST00000516060 DTNBP1Q96EV8 351 aa-2.02□□□□□ -2.73
SCARNA23-201ENST00000516060 EBNA1BP2Q99848 306 aaKnown RBP-2.02□□□□□ -2.73
SCARNA23-201ENST00000516060 CHST6Q9GZX3 395 aa-2.02□□□□□ -2.73
SCARNA23-201ENST00000516060 SLC25A31Q9H0C2 315 aa-2.02□□□□□ -2.73
SCARNA23-201ENST00000516060 METTL17Q9H7H0 456 aaPredicted RBP-2.02□□□□□ -2.73
SCARNA23-201ENST00000516060 C12orf4Q9NQ89 552 aa-2.02□□□□□ -2.73
SCARNA23-201ENST00000516060 HPF1Q9NWY4 346 aa-2.02□□□□□ -2.73
SCARNA23-201ENST00000516060 TBL2Q9Y4P3 447 aaKnown RBP-2.02□□□□□ -2.73
SCARNA23-201ENST00000516060 ATP8B1O43520 1251 aa-2.03□□□□□ -2.73
SCARNA23-201ENST00000516060 PPBPP02775 128 aa-2.03□□□□□ -2.73
SCARNA23-201ENST00000516060 FBP1P09467 338 aa-2.03□□□□□ -2.73
SCARNA23-201ENST00000516060 CD40LGP29965 261 aa-2.03□□□□□ -2.73
SCARNA23-201ENST00000516060 GRPRP30550 384 aa-2.03□□□□□ -2.73
SCARNA23-201ENST00000516060 ALDH3A1P30838 453 aa-2.03□□□□□ -2.73
SCARNA23-201ENST00000516060 AIF1P55008 147 aa-2.03□□□□□ -2.73
SCARNA23-201ENST00000516060 RAB4BP61018 213 aa-2.03□□□□□ -2.73
SCARNA23-201ENST00000516060 FGF12P61328 243 aa-2.03□□□□□ -2.73
SCARNA23-201ENST00000516060 XRCC4Q13426 336 aa-2.03□□□□□ -2.73
SCARNA23-201ENST00000516060 ZNF345Q14585 488 aa-2.03□□□□□ -2.73
SCARNA23-201ENST00000516060 LINC00322Q6ZN03 302 aaPredicted RBP-2.03□□□□□ -2.73
SCARNA23-201ENST00000516060 SETD3Q86TU7 594 aaPredicted RBP-2.03□□□□□ -2.73
SCARNA23-201ENST00000516060 ZNF675Q8TD23 568 aa-2.03□□□□□ -2.73
SCARNA23-201ENST00000516060 PLAC4Q8WY50 150 aa-2.03□□□□□ -2.73
SCARNA23-201ENST00000516060 TESCQ96BS2 214 aa-2.03□□□□□ -2.73
SCARNA23-201ENST00000516060 IMMP2LQ96T52 175 aa-2.03□□□□□ -2.73
SCARNA23-201ENST00000516060 CHRNA10Q9GZZ6 450 aa-2.03□□□□□ -2.73
SCARNA23-201ENST00000516060 ACER3Q9NUN7 267 aa-2.03□□□□□ -2.73
SCARNA23-201ENST00000516060 DDIT4Q9NX09 232 aa-2.03□□□□□ -2.73
SCARNA23-201ENST00000516060 HHLA2Q9UM44 414 aa-2.03□□□□□ -2.73
SCARNA23-201ENST00000516060 CLEC4AQ9UMR7 237 aa-2.03□□□□□ -2.73
SCARNA23-201ENST00000516060 RBM7Q9Y580 266 aaKnown RBP-2.03□□□□□ -2.73
SCARNA23-201ENST00000516060 KANK1Q14678 1352 aa-2.03□□□□□ -2.73
SCARNA23-201ENST00000516060 ADAMTSL3P82987 1691 aa-2.03□□□□□ -2.73
SCARNA23-201ENST00000516060 FAM240AA0A1B0GVK7 77 aa-2.04□□□□□ -2.74
SCARNA23-201ENST00000516060 LINC00862A6NCI5 91 aa-2.04□□□□□ -2.74
SCARNA23-201ENST00000516060 BCKDKO14874 412 aa-2.04□□□□□ -2.74
SCARNA23-201ENST00000516060 MPDU1O75352 247 aa-2.04□□□□□ -2.74
SCARNA23-201ENST00000516060 PMP2P02689 132 aa-2.04□□□□□ -2.74
SCARNA23-201ENST00000516060 EIF2S2P20042 333 aaKnown RBP-2.04□□□□□ -2.74
SCARNA23-201ENST00000516060 GABRA2P47869 451 aa-2.04□□□□□ -2.74
SCARNA23-201ENST00000516060 RBM11P57052 281 aaKnown RBP-2.04□□□□□ -2.74
SCARNA23-201ENST00000516060 RAB2AP61019 212 aa-2.04□□□□□ -2.74
SCARNA23-201ENST00000516060 RHOAP61586 193 aa-2.04□□□□□ -2.74
SCARNA23-201ENST00000516060 PAFAH1B2P68402 229 aa-2.04□□□□□ -2.74
SCARNA23-201ENST00000516060 ELP6Q0PNE2 266 aa-2.04□□□□□ -2.74
SCARNA23-201ENST00000516060 AKAP6Q13023 2319 aa-2.04□□□□□ -2.74
SCARNA23-201ENST00000516060 PDE6HQ13956 83 aa-2.04□□□□□ -2.74
SCARNA23-201ENST00000516060 C5orf64Q2M2E5 130 aa-2.04□□□□□ -2.74
SCARNA23-201ENST00000516060 CEACAM16Q2WEN9 425 aa-2.04□□□□□ -2.74
SCARNA23-201ENST00000516060 FAM27BQ5VT28 67 aa-2.04□□□□□ -2.74
SCARNA23-201ENST00000516060 RUFY3Q7L099 469 aa-2.04□□□□□ -2.74
SCARNA23-201ENST00000516060 ANGPTL5Q86XS5 388 aa-2.04□□□□□ -2.74
SCARNA23-201ENST00000516060 LRRC39Q96DD0 335 aa-2.04□□□□□ -2.74
SCARNA23-201ENST00000516060 SNX6Q9UNH7 406 aa-2.04□□□□□ -2.74
SCARNA23-201ENST00000516060 SAR1BQ9Y6B6 198 aa-2.04□□□□□ -2.74
SCARNA23-201ENST00000516060 B4DEV8 164 aa-2.05□□□□□ -2.74
SCARNA23-201ENST00000516060 XRCC2O43543 280 aa-2.05□□□□□ -2.74
SCARNA23-201ENST00000516060 KLF7O75840 302 aaPredicted RBP-2.05□□□□□ -2.74
SCARNA23-201ENST00000516060 NDUFB2O95178 105 aa-2.05□□□□□ -2.74
SCARNA23-201ENST00000516060 IFNB1P01574 187 aa-2.05□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms