RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 IFITM2Q01629 132 aa2.45□□□□□ -2.02
RNU6-488P-201ENST00000515918 EMX1Q04741 257 aaPredicted RBP2.45□□□□□ -2.02
RNU6-488P-201ENST00000515918 SRSF6Q13247 344 aaKnown RBP2.45□□□□□ -2.02
RNU6-488P-201ENST00000515918 MAPK14Q16539 360 aa2.45□□□□□ -2.02
RNU6-488P-201ENST00000515918 HIST3H3Q16695 136 aa2.45□□□□□ -2.02
RNU6-488P-201ENST00000515918 ACSBG2Q5FVE4 666 aa2.45□□□□□ -2.02
RNU6-488P-201ENST00000515918 C1orf194Q5T5A4 169 aa2.45□□□□□ -2.02
RNU6-488P-201ENST00000515918 ALKAL1Q6UXT8 129 aa2.45□□□□□ -2.02
RNU6-488P-201ENST00000515918 ZNF550Q7Z398 422 aa2.45□□□□□ -2.02
RNU6-488P-201ENST00000515918 LRP11Q86VZ4 500 aa2.45□□□□□ -2.02
RNU6-488P-201ENST00000515918 UBL4BQ8N7F7 174 aa2.45□□□□□ -2.02
RNU6-488P-201ENST00000515918 OR51D1Q8NGF3 324 aa2.45□□□□□ -2.02
RNU6-488P-201ENST00000515918 ZNF721Q8TF20 911 aa2.45□□□□□ -2.02
RNU6-488P-201ENST00000515918 OTUB2Q96DC9 234 aa2.45□□□□□ -2.02
RNU6-488P-201ENST00000515918 ANKRD36BP1Q96IX9 119 aa2.45□□□□□ -2.02
RNU6-488P-201ENST00000515918 TRIB3Q96RU7 358 aa2.45□□□□□ -2.02
RNU6-488P-201ENST00000515918 HES4Q9HCC6 221 aa2.45□□□□□ -2.02
RNU6-488P-201ENST00000515918 EMC3Q9P0I2 261 aa2.45□□□□□ -2.02
RNU6-488P-201ENST00000515918 OR5V1Q9UGF6 321 aa2.45□□□□□ -2.02
RNU6-488P-201ENST00000515918 DNAJC12Q9UKB3 198 aa2.45□□□□□ -2.02
RNU6-488P-201ENST00000515918 TRAPPC1Q9Y5R8 145 aa2.45□□□□□ -2.02
RNU6-488P-201ENST00000515918 U3KQK5 164 aa2.45□□□□□ -2.02
RNU6-488P-201ENST00000515918 MYO5BQ9ULV0 1848 aa2.45□□□□□ -2.02
RNU6-488P-201ENST00000515918 CEP170Q5SW79 1584 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 IGKV2-28A0A075B6P5 120 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 TMED7-TICAM2A0A0A6YYA0 188 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 A0A0B4J2C4 111 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 GOLGA6L4A6NEF3 574 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 CLDN24A6NM45 220 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 M0R381 172 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 IGKV2D-28P01615 120 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 OPN1SWP03999 348 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 PFN1P07737 140 aaKnown RBP2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 ZNF32P17041 273 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 ALOX5APP20292 161 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 CCL1P22362 96 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 DDTP30046 118 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 OR10J1P30954 320 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 PPP1R2P41236 205 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 MAP2K4P45985 399 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 SPOPLQ6IQ16 392 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 PPP1R2P3Q6NXS1 205 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 TMEM136Q6ZRR5 245 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 C1orf174Q8IYL3 243 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 C3orf22Q8N5N4 141 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 CLDN22Q8N7P3 220 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 ZNF615Q8N8J6 731 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 JOSD2Q8TAC2 188 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 DGCR14Q96DF8 476 aaKnown RBP2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 IMP4Q96G21 291 aaKnown RBP2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 LINC00477Q96M19 166 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 TMEM109Q9BVC6 243 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 SLC2A9Q9NRM0 540 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 SLC23A2Q9UGH3 650 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 MYO10Q9HD67 2058 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 ARID1AO14497 2285 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 TICRRQ7Z2Z1 1910 aa2.44□□□□□ -2.02
RNU6-488P-201ENST00000515918 CRB1P82279 1406 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 ADGRL3Q9HAR2 1447 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 PRRC2AP48634 2157 aaKnown RBP2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 IGKV1D-37A0A075B6S9 117 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 IGKV6D-41A0A0C4DH26 115 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 SMIM9A6NGZ8 99 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 CHP2O43745 196 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 GUSBP08236 651 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 OPRM1P35372 400 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 SLCO1A2P46721 670 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 SULT1A1P50225 295 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 FGF12P61328 243 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 TSPAN31Q12999 210 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 PRDX4Q13162 271 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 OR8G1Q15617 311 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 SPIN3Q5JUX0 258 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 C10orf91Q5T1B1 145 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 FAM173BQ6P4H8 233 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 HMGN2P46Q86SG4 172 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 NIT1Q86X76 327 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 C1orf158Q8N1D5 194 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 LRRC25Q8N386 305 aaPredicted RBP2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 RPRMLQ8N4K4 120 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 ZFAND2AQ8N6M9 145 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 CD200R1Q8TD46 325 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 SLC35B4Q969S0 331 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 SCRT1Q9BWW7 348 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 PECRQ9BY49 303 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 OR51I2Q9H344 312 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 TAS2R1Q9NYW7 299 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 ZNF443Q9Y2A4 671 aaPredicted RBP2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 LSM5Q9Y4Y9 91 aaKnown RBP2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 FLT4P35916 1363 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 THSD7AQ9UPZ6 1657 aa2.43□□□□□ -2.02
RNU6-488P-201ENST00000515918 TRBV24-1A0A075B6N3 115 aa2.42□□□□□ -2.02
RNU6-488P-201ENST00000515918 LINC00862A6NCI5 91 aa2.42□□□□□ -2.02
RNU6-488P-201ENST00000515918 FADS1O60427 444 aa2.42□□□□□ -2.02
RNU6-488P-201ENST00000515918 STK16O75716 305 aa2.42□□□□□ -2.02
RNU6-488P-201ENST00000515918 NSA2O95478 260 aaKnown RBP2.42□□□□□ -2.02
RNU6-488P-201ENST00000515918 KRT75O95678 551 aa2.42□□□□□ -2.02
RNU6-488P-201ENST00000515918 MARCKSL1P49006 195 aa2.42□□□□□ -2.02
RNU6-488P-201ENST00000515918 SPCS3P61009 180 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms