RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 FADS2O95864 444 aaKnown RBP0.71□□□□□ -2.3
NEDD4-211ENST00000514893 GPX1P07203 203 aa0.71□□□□□ -2.3
NEDD4-211ENST00000514893 GP1BAP07359 652 aa0.71□□□□□ -2.3
NEDD4-211ENST00000514893 CFL1P23528 166 aaKnown RBP0.71□□□□□ -2.3
NEDD4-211ENST00000514893 CRHBPP24387 322 aa0.71□□□□□ -2.3
NEDD4-211ENST00000514893 AGTR1P30556 359 aa0.71□□□□□ -2.3
NEDD4-211ENST00000514893 KDELR2P33947 212 aa0.71□□□□□ -2.3
NEDD4-211ENST00000514893 HADHBP55084 474 aaKnown RBP0.71□□□□□ -2.3
NEDD4-211ENST00000514893 HERVK_113P63121 156 aa0.71□□□□□ -2.3
NEDD4-211ENST00000514893 SLC38A11Q08AI6 406 aa0.71□□□□□ -2.3
NEDD4-211ENST00000514893 TMEM249Q2WGJ8 235 aa0.71□□□□□ -2.3
NEDD4-211ENST00000514893 SPATA31B1PQ5VZV4 182 aa0.71□□□□□ -2.3
NEDD4-211ENST00000514893 SCGB1D4Q6XE38 83 aa0.71□□□□□ -2.3
NEDD4-211ENST00000514893 ZNF767PQ75MW2 155 aa0.71□□□□□ -2.3
NEDD4-211ENST00000514893 SLC35E3Q7Z769 313 aa0.71□□□□□ -2.3
NEDD4-211ENST00000514893 BLIDQ8IZY5 108 aa0.71□□□□□ -2.3
NEDD4-211ENST00000514893 ACBD4Q8NC06 268 aa0.71□□□□□ -2.3
NEDD4-211ENST00000514893 ANGPTL6Q8NI99 470 aa0.71□□□□□ -2.3
NEDD4-211ENST00000514893 RPS4Y2Q8TD47 263 aa0.71□□□□□ -2.3
NEDD4-211ENST00000514893 TNFAIP8L1Q8WVP5 186 aa0.71□□□□□ -2.3
NEDD4-211ENST00000514893 CYGBQ8WWM9 190 aa0.71□□□□□ -2.3
NEDD4-211ENST00000514893 C12orf43Q96C57 262 aaKnown RBP0.71□□□□□ -2.3
NEDD4-211ENST00000514893 SMIM12Q96EX1 92 aa0.71□□□□□ -2.3
NEDD4-211ENST00000514893 NMNAT3Q96T66 252 aa0.71□□□□□ -2.3
NEDD4-211ENST00000514893 ACBD6Q9BR61 282 aa0.71□□□□□ -2.3
NEDD4-211ENST00000514893 SMDT1Q9H4I9 107 aa0.71□□□□□ -2.3
NEDD4-211ENST00000514893 MS4A12Q9NXJ0 267 aa0.71□□□□□ -2.3
NEDD4-211ENST00000514893 LINC00527Q9UJ94 153 aa0.71□□□□□ -2.3
NEDD4-211ENST00000514893 MRPS16Q9Y3D3 137 aaKnown RBP0.71□□□□□ -2.3
NEDD4-211ENST00000514893 HDGFL3Q9Y3E1 203 aa0.71□□□□□ -2.3
NEDD4-211ENST00000514893 CACNA1GO43497 2377 aa0.71□□□□□ -2.3
NEDD4-211ENST00000514893 RGS12O14924 1447 aa0.71□□□□□ -2.3
NEDD4-211ENST00000514893 KMT2BQ9UMN6 2715 aaPredicted RBP0.71□□□□□ -2.3
NEDD4-211ENST00000514893 CHD2O14647 1828 aaKnown RBP0.71□□□□□ -2.3
NEDD4-211ENST00000514893 LRPPRCP42704 1394 aaKnown RBP0.7□□□□□ -2.3
NEDD4-211ENST00000514893 VWDEQ8N2E2 1590 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 YLPM1P49750 1951 aaKnown RBP0.7□□□□□ -2.3
NEDD4-211ENST00000514893 MAP3K19Q56UN5 1328 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 KMT2EQ8IZD2 1858 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 NUP153P49790 1475 aaKnown RBP0.7□□□□□ -2.3
NEDD4-211ENST00000514893 C2orf74A8MZ97 194 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 OR11H12B2RN74 326 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 F5H5K5 113 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 COPEO14579 308 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 PHYHO14832 338 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 GNRH2O43555 120 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 NDUFS6O75380 124 aaKnown RBP0.7□□□□□ -2.3
NEDD4-211ENST00000514893 CRYBA1P05813 215 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 CDK2P24941 298 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 MAGEA12P43365 314 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 DAPP51397 102 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 TAS2R45P59539 299 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 TMEM258P61165 79 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 GNA12Q03113 381 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 PMS2P3Q13401 168 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 USF2Q15853 346 aaPredicted RBP0.7□□□□□ -2.3
NEDD4-211ENST00000514893 ZBTB6Q15916 424 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 PCOTHQ58A44 107 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 MESTQ5EB52 335 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 RBM48Q5RL73 367 aaKnown RBP0.7□□□□□ -2.3
NEDD4-211ENST00000514893 DRAM2Q6UX65 266 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 OR11H2Q8NH07 326 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 OR5AK3PQ8NH89 298 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 TLCD1Q96CP7 247 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 ACY3Q96HD9 319 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 TBX5Q99593 518 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 UPK3BQ9BT76 320 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 TIPINQ9BVW5 301 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 CDCA4Q9BXL8 241 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 MROQ9BYG7 248 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 UPF3BQ9BZI7 483 aaKnown RBP0.7□□□□□ -2.3
NEDD4-211ENST00000514893 EIF5A2Q9GZV4 153 aaKnown RBP0.7□□□□□ -2.3
NEDD4-211ENST00000514893 C16orf95Q9H693 158 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 SLC2A9Q9NRM0 540 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 C1orf109Q9NX04 203 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 NDUFB11Q9NX14 153 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 PUS1Q9Y606 427 aaKnown RBP eCLIP0.7□□□□□ -2.3
NEDD4-211ENST00000514893 MTCH2Q9Y6C9 303 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 ADAMTSL1Q8N6G6 1762 aa0.7□□□□□ -2.3
NEDD4-211ENST00000514893 GBF1Q92538 1859 aa0.69□□□□□ -2.3
NEDD4-211ENST00000514893 CLUHO75153 1309 aa0.69□□□□□ -2.3
NEDD4-211ENST00000514893 IGHV3-15A0A0B4J1V0 119 aa0.69□□□□□ -2.3
NEDD4-211ENST00000514893 GRIFINA4D1Z8 144 aa0.69□□□□□ -2.3
NEDD4-211ENST00000514893 H3BPC8 53 aa0.69□□□□□ -2.3
NEDD4-211ENST00000514893 H3BSA7 217 aa0.69□□□□□ -2.3
NEDD4-211ENST00000514893 YKT6O15498 198 aa0.69□□□□□ -2.3
NEDD4-211ENST00000514893 S1PR2O95136 353 aa0.69□□□□□ -2.3
NEDD4-211ENST00000514893 CD7P09564 240 aa0.69□□□□□ -2.3
NEDD4-211ENST00000514893 CXCL2P19875 107 aa0.69□□□□□ -2.3
NEDD4-211ENST00000514893 CRYBB3P26998 211 aa0.69□□□□□ -2.3
NEDD4-211ENST00000514893 HSPA9P38646 679 aaKnown RBP0.69□□□□□ -2.3
NEDD4-211ENST00000514893 CCR2P41597 374 aa0.69□□□□□ -2.3
NEDD4-211ENST00000514893 OR1E2P47887 323 aa0.69□□□□□ -2.3
NEDD4-211ENST00000514893 EMP2P54851 167 aa0.69□□□□□ -2.3
NEDD4-211ENST00000514893 CLDN12P56749 244 aa0.69□□□□□ -2.3
NEDD4-211ENST00000514893 TMEM33P57088 247 aa0.69□□□□□ -2.3
NEDD4-211ENST00000514893 TSPEAR-AS2P59090 65 aa0.69□□□□□ -2.3
NEDD4-211ENST00000514893 BTN3A2P78410 334 aa0.69□□□□□ -2.3
NEDD4-211ENST00000514893 FAM3AP98173 230 aa0.69□□□□□ -2.3
NEDD4-211ENST00000514893 GNA13Q14344 377 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms