RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 RAX2Q96IS3 184 aa8.19□□□□□ -1.1
HMGXB3-205ENST00000514469 RITA1Q96K30 269 aa8.19□□□□□ -1.1
HMGXB3-205ENST00000514469 HDHD3Q9BSH5 251 aaPredicted RBP8.19□□□□□ -1.1
HMGXB3-205ENST00000514469 MCRIP2Q9BUT9 160 aaKnown RBP8.19□□□□□ -1.1
HMGXB3-205ENST00000514469 PARP12Q9H0J9 701 aaKnown RBP8.19□□□□□ -1.1
HMGXB3-205ENST00000514469 ACOT13Q9NPJ3 140 aa8.19□□□□□ -1.1
HMGXB3-205ENST00000514469 C12orf4Q9NQ89 552 aa8.19□□□□□ -1.1
HMGXB3-205ENST00000514469 PIPOXQ9P0Z9 390 aa8.19□□□□□ -1.1
HMGXB3-205ENST00000514469 SLC23A1Q9UHI7 598 aa8.19□□□□□ -1.1
HMGXB3-205ENST00000514469 MGAT4AQ9UM21 535 aa8.19□□□□□ -1.1
HMGXB3-205ENST00000514469 COL7A1Q02388 2944 aa8.18□□□□□ -1.1
HMGXB3-205ENST00000514469 IGHV7-81A0A0B4J1V7 117 aa8.18□□□□□ -1.1
HMGXB3-205ENST00000514469 RAB29O14966 203 aa8.18□□□□□ -1.1
HMGXB3-205ENST00000514469 OR5H8P0DN80 308 aa8.18□□□□□ -1.1
HMGXB3-205ENST00000514469 PSMB8P28062 276 aa8.18□□□□□ -1.1
HMGXB3-205ENST00000514469 HOXD3P31249 432 aaPredicted RBP8.18□□□□□ -1.1
HMGXB3-205ENST00000514469 TMEM50BP56557 158 aa8.18□□□□□ -1.1
HMGXB3-205ENST00000514469 CLDN12P56749 244 aa8.18□□□□□ -1.1
HMGXB3-205ENST00000514469 SSX1Q16384 188 aa8.18□□□□□ -1.1
HMGXB3-205ENST00000514469 C5orf64Q2M2E5 130 aa8.18□□□□□ -1.1
HMGXB3-205ENST00000514469 DEFB136Q30KP8 78 aa8.18□□□□□ -1.1
HMGXB3-205ENST00000514469 RPL39P5Q59GN2 51 aa8.18□□□□□ -1.1
HMGXB3-205ENST00000514469 FAM131AQ6UXB0 335 aa8.18□□□□□ -1.1
HMGXB3-205ENST00000514469 SETD6Q8TBK2 473 aa8.18□□□□□ -1.1
HMGXB3-205ENST00000514469 FAM3DQ96BQ1 224 aa8.18□□□□□ -1.1
HMGXB3-205ENST00000514469 ARHGAP5-AS1Q96IT6 56 aa8.18□□□□□ -1.1
HMGXB3-205ENST00000514469 CNBD2Q96M20 576 aa8.18□□□□□ -1.1
HMGXB3-205ENST00000514469 KCTD7Q96MP8 289 aa8.18□□□□□ -1.1
HMGXB3-205ENST00000514469 DUX3Q96PT4 197 aa8.18□□□□□ -1.1
HMGXB3-205ENST00000514469 CHCHD6Q9BRQ6 235 aa8.18□□□□□ -1.1
HMGXB3-205ENST00000514469 AGMATQ9BSE5 352 aa8.18□□□□□ -1.1
HMGXB3-205ENST00000514469 PECRQ9BY49 303 aa8.18□□□□□ -1.1
HMGXB3-205ENST00000514469 OR51J1Q9H342 316 aa8.18□□□□□ -1.1
HMGXB3-205ENST00000514469 NDUFB11Q9NX14 153 aa8.18□□□□□ -1.1
HMGXB3-205ENST00000514469 OR1A1Q9P1Q5 309 aa8.18□□□□□ -1.1
HMGXB3-205ENST00000514469 BLOC1S6Q9UL45 172 aa8.18□□□□□ -1.1
HMGXB3-205ENST00000514469 V9GY05 133 aa8.18□□□□□ -1.1
HMGXB3-205ENST00000514469 TMEM272A0A1B0GTI8 110 aa8.17□□□□□ -1.1
HMGXB3-205ENST00000514469 WI2-2373I1.2A0A1W2PRP0 233 aa8.17□□□□□ -1.1
HMGXB3-205ENST00000514469 OR5H14A6NHG9 310 aa8.17□□□□□ -1.1
HMGXB3-205ENST00000514469 CCL24O00175 119 aa8.17□□□□□ -1.1
HMGXB3-205ENST00000514469 ATP6V0E1O15342 81 aa8.17□□□□□ -1.1
HMGXB3-205ENST00000514469 CT45A6P0DMU7 189 aa8.17□□□□□ -1.1
HMGXB3-205ENST00000514469 CT45A5P0DMU8 189 aa8.17□□□□□ -1.1
HMGXB3-205ENST00000514469 CT45A7P0DMV0 189 aa8.17□□□□□ -1.1
HMGXB3-205ENST00000514469 ZBTB25P24278 435 aa8.17□□□□□ -1.1
HMGXB3-205ENST00000514469 PPIFP30405 207 aaKnown RBP8.17□□□□□ -1.1
HMGXB3-205ENST00000514469 RANBP1P43487 201 aa8.17□□□□□ -1.1
HMGXB3-205ENST00000514469 VEGFCP49767 419 aa8.17□□□□□ -1.1
HMGXB3-205ENST00000514469 CRIP2P52943 208 aaPredicted RBP8.17□□□□□ -1.1
HMGXB3-205ENST00000514469 PLA2G7Q13093 441 aa8.17□□□□□ -1.1
HMGXB3-205ENST00000514469 FHL3Q13643 280 aa8.17□□□□□ -1.1
HMGXB3-205ENST00000514469 KIR2DS1Q14954 304 aa8.17□□□□□ -1.1
HMGXB3-205ENST00000514469 PLAC9Q5JTB6 97 aa8.17□□□□□ -1.1
HMGXB3-205ENST00000514469 CD200R1LQ6Q8B3 271 aa8.17□□□□□ -1.1
HMGXB3-205ENST00000514469 OR56B1Q8NGI3 324 aa8.17□□□□□ -1.1
HMGXB3-205ENST00000514469 C4orf3Q8WVX3 66 aa8.17□□□□□ -1.1
HMGXB3-205ENST00000514469 EDARADDQ8WWZ3 215 aa8.17□□□□□ -1.1
HMGXB3-205ENST00000514469 DPF1Q92782 380 aa8.17□□□□□ -1.1
HMGXB3-205ENST00000514469 GHITMQ9H3K2 345 aa8.17□□□□□ -1.1
HMGXB3-205ENST00000514469 Q9N2K0 584 aa8.17□□□□□ -1.1
HMGXB3-205ENST00000514469 PARP11Q9NR21 331 aa8.17□□□□□ -1.1
HMGXB3-205ENST00000514469 RAB26Q9ULW5 256 aa8.17□□□□□ -1.1
HMGXB3-205ENST00000514469 DNAH9Q9NYC9 4486 aa8.16□□□□□ -1.1
HMGXB3-205ENST00000514469 TRAV1-2A0A0B4J238 106 aa8.16□□□□□ -1.1
HMGXB3-205ENST00000514469 IGKV1-6A0A0C4DH72 117 aa8.16□□□□□ -1.1
HMGXB3-205ENST00000514469 SHISA3A0PJX4 238 aa8.16□□□□□ -1.1
HMGXB3-205ENST00000514469 G3V318 75 aa8.16□□□□□ -1.1
HMGXB3-205ENST00000514469 H0YJW9 148 aa8.16□□□□□ -1.1
HMGXB3-205ENST00000514469 DENRO43583 198 aaKnown RBP8.16□□□□□ -1.1
HMGXB3-205ENST00000514469 IGLV1-40P01703 118 aa8.16□□□□□ -1.1
HMGXB3-205ENST00000514469 SCTP09683 121 aa8.16□□□□□ -1.1
HMGXB3-205ENST00000514469 PSMD7P51665 324 aa8.16□□□□□ -1.1
HMGXB3-205ENST00000514469 GABARAPL2P60520 117 aa8.16□□□□□ -1.1
HMGXB3-205ENST00000514469 NDPQ00604 133 aa8.16□□□□□ -1.1
HMGXB3-205ENST00000514469 C2orf76Q3KRA6 126 aa8.16□□□□□ -1.1
HMGXB3-205ENST00000514469 C19orf54Q5BKX5 351 aa8.16□□□□□ -1.1
HMGXB3-205ENST00000514469 HES5Q5TA89 166 aa8.16□□□□□ -1.1
HMGXB3-205ENST00000514469 GLDNQ6ZMI3 551 aaPredicted RBP8.16□□□□□ -1.1
HMGXB3-205ENST00000514469 OR5AN1Q8NGI8 311 aa8.16□□□□□ -1.1
HMGXB3-205ENST00000514469 PTX4Q96A99 478 aa8.16□□□□□ -1.1
HMGXB3-205ENST00000514469 ABHD14BQ96IU4 210 aa8.16□□□□□ -1.1
HMGXB3-205ENST00000514469 CMSS1Q9BQ75 279 aaKnown RBP8.16□□□□□ -1.1
HMGXB3-205ENST00000514469 C11orf54Q9H0W9 315 aaPredicted RBP8.16□□□□□ -1.1
HMGXB3-205ENST00000514469 KIAA1456Q9P272 454 aa8.16□□□□□ -1.1
HMGXB3-205ENST00000514469 TRAV41A0A0B4J266 112 aa8.15□□□□□ -1.1
HMGXB3-205ENST00000514469 ERICH4A6NGS2 130 aa8.15□□□□□ -1.1
HMGXB3-205ENST00000514469 IFITM5A6NNB3 132 aa8.15□□□□□ -1.1
HMGXB3-205ENST00000514469 TRDCB7Z8K6 153 aa8.15□□□□□ -1.1
HMGXB3-205ENST00000514469 PDCD5O14737 125 aa8.15□□□□□ -1.1
HMGXB3-205ENST00000514469 HSPA12AO43301 675 aa8.15□□□□□ -1.1
HMGXB3-205ENST00000514469 MRPS14O60783 128 aaKnown RBP8.15□□□□□ -1.1
HMGXB3-205ENST00000514469 PROP1O75360 226 aa8.15□□□□□ -1.1
HMGXB3-205ENST00000514469 RBBP9O75884 186 aa8.15□□□□□ -1.1
HMGXB3-205ENST00000514469 MC5RP33032 325 aa8.15□□□□□ -1.1
HMGXB3-205ENST00000514469 CEACAM6P40199 344 aa8.15□□□□□ -1.1
HMGXB3-205ENST00000514469 RAB25P57735 213 aa8.15□□□□□ -1.1
HMGXB3-205ENST00000514469 OR10A3P58181 314 aa8.15□□□□□ -1.1
HMGXB3-205ENST00000514469 RUNX1Q01196 453 aa8.15□□□□□ -1.1
HMGXB3-205ENST00000514469 KIAA0141Q14154 515 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms