RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 NDUFA5Q16718 116 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 LGALSLQ3ZCW2 172 aaPredicted RBP6.82□□□□□ -1.32
CCL28-204ENST00000514421 NKAPLQ5M9Q1 402 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 GPR157Q5UAW9 335 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 TMEM65Q6PI78 240 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 RBMS3Q6XE24 437 aaKnown RBP6.82□□□□□ -1.32
CCL28-204ENST00000514421 C9orf139Q6ZV77 190 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 TMED4Q7Z7H5 227 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 FAM185AQ8N0U4 392 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 ADAD2Q8NCV1 583 aaKnown RBP6.82□□□□□ -1.32
CCL28-204ENST00000514421 GRPEL2Q8TAA5 225 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 JMJD8Q96S16 334 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 PHB2Q99623 299 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 SUCNR1Q9BXA5 334 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 METTL8Q9H825 291 aaKnown RBP6.82□□□□□ -1.32
CCL28-204ENST00000514421 HEXA-AS1Q9H8Q6 139 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 UNKLQ9H9P5 680 aaKnown RBP6.82□□□□□ -1.32
CCL28-204ENST00000514421 ZNF286AQ9HBT8 521 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 Q9N2K0 584 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 C19orf12Q9NSK7 152 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 EHFQ9NZC4 300 aa6.82□□□□□ -1.32
CCL28-204ENST00000514421 IGHV3OR16-10A0A075B7F0 116 aa6.81□□□□□ -1.32
CCL28-204ENST00000514421 TRAV24A0A0B4J272 114 aa6.81□□□□□ -1.32
CCL28-204ENST00000514421 IGHV1-69DA0A0B4J2H0 117 aa6.81□□□□□ -1.32
CCL28-204ENST00000514421 NPIPB11E5RHQ5 1161 aa6.81□□□□□ -1.32
CCL28-204ENST00000514421 OR7C1O76099 320 aaPredicted RBP6.81□□□□□ -1.32
CCL28-204ENST00000514421 IGHV1-69P01742 117 aa6.81□□□□□ -1.32
CCL28-204ENST00000514421 OR5H8P0DN80 308 aa6.81□□□□□ -1.32
CCL28-204ENST00000514421 CD34P28906 385 aa6.81□□□□□ -1.32
CCL28-204ENST00000514421 OR3A1P47881 315 aa6.81□□□□□ -1.32
CCL28-204ENST00000514421 EDDM3BP56851 147 aa6.81□□□□□ -1.32
CCL28-204ENST00000514421 ARPC4P59998 168 aa6.81□□□□□ -1.32
CCL28-204ENST00000514421 TSPAN5P62079 268 aa6.81□□□□□ -1.32
CCL28-204ENST00000514421 FGL1Q08830 312 aa6.81□□□□□ -1.32
CCL28-204ENST00000514421 RBM39Q14498 530 aaKnown RBP6.81□□□□□ -1.32
CCL28-204ENST00000514421 TUSC1Q2TAM9 212 aa6.81□□□□□ -1.32
CCL28-204ENST00000514421 ZNF767PQ75MW2 155 aa6.81□□□□□ -1.32
CCL28-204ENST00000514421 VMO1Q7Z5L0 202 aa6.81□□□□□ -1.32
CCL28-204ENST00000514421 BCL6BQ8N143 479 aaPredicted RBP6.81□□□□□ -1.32
CCL28-204ENST00000514421 Q8N7P7 452 aa6.81□□□□□ -1.32
CCL28-204ENST00000514421 C22orf15Q8WYQ4 148 aa6.81□□□□□ -1.32
CCL28-204ENST00000514421 TNFRSF14Q92956 283 aa6.81□□□□□ -1.32
CCL28-204ENST00000514421 LHX4Q969G2 390 aa6.81□□□□□ -1.32
CCL28-204ENST00000514421 GALNT14Q96FL9 552 aa6.81□□□□□ -1.32
CCL28-204ENST00000514421 RAB18Q9NP72 206 aa6.81□□□□□ -1.32
CCL28-204ENST00000514421 HSPB11Q9Y547 144 aa6.81□□□□□ -1.32
CCL28-204ENST00000514421 TRAV40A0A0B4J280 105 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 CRYM-AS1A6NIL9 109 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 C17orf98A8MV24 154 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 MCRIP1C9JLW8 97 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 SLC33A1O00400 549 aaPredicted RBP6.8□□□□□ -1.32
CCL28-204ENST00000514421 SDCBPO00560 298 aaPredicted RBP6.8□□□□□ -1.32
CCL28-204ENST00000514421 GOSR2O14653 212 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 TUSC2O75896 110 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 CTXN2P0C2S0 81 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 ZNF728P0DKX0 622 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 SLC25A4P12235 298 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 RPA2P15927 270 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 C4BPBP20851 252 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 KIR2DS4P43632 304 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 KCNJ3P48549 501 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 UBE2E1P51965 193 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 P2RX3P56373 397 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 HILS1P60008 231 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 IL15RAQ13261 267 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 EDDM3AQ14507 147 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 KIR2DS1Q14954 304 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 NCR3LG1Q68D85 454 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 LDLRAD3Q86YD5 345 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 C11orf42Q8N5U0 333 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 LRTM2Q8N967 370 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 SUMF2Q8NBJ7 301 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 TMEM158Q8WZ71 300 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 CORO2AQ92828 525 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 MOB3AQ96BX8 217 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 ZNF2Q9BSG1 426 aaPredicted RBP6.8□□□□□ -1.32
CCL28-204ENST00000514421 CABLES2Q9BTV7 478 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 RSRP1Q9BUV0 290 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 NMES1Q9C002 83 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 PRDM13Q9H4Q3 707 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 NCOR1P1Q9H4R4 102 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 SIRT7Q9NRC8 400 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 SLC23A1Q9UHI7 598 aa6.8□□□□□ -1.32
CCL28-204ENST00000514421 TRBV6-7A0A0A0MS04 114 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 TRAV14DV4A0A0A6YYC5 116 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 TRDCB7Z8K6 153 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 RNASEK-C17orf49H0YIS7 233 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 TRIM77I1YAP6 450 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 VENTXO95231 258 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 RBP4P02753 201 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 LYL1P12980 280 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 CCL3L1P16619 93 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 AKR1C4P17516 323 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 NFYAP23511 347 aaPredicted RBP6.79□□□□□ -1.32
CCL28-204ENST00000514421 GLIPR1P48060 266 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 DLX6P56179 175 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 ERVFRD-1P60508 538 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 RND3P61587 244 aa6.79□□□□□ -1.32
CCL28-204ENST00000514421 CYCSP99999 105 aaKnown RBP6.79□□□□□ -1.32
CCL28-204ENST00000514421 AESQ08117 197 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms