RNA–Protein interactions for RNA: ENST00000513678.5

MATR3-222, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-222	ENST00000513678	MRPL20	Q9BYC9	149 aa	Known RBP	13.19	□□□□□ -0.3
MATR3-222	ENST00000513678	CHMP1A	Q9HD42	196 aa	Predicted RBP	13.19	□□□□□ -0.3
MATR3-222	ENST00000513678	SLC23A1	Q9UHI7	598 aa		13.19	□□□□□ -0.3
MATR3-222	ENST00000513678	AK3	Q9UIJ7	227 aa		13.19	□□□□□ -0.3
MATR3-222	ENST00000513678	ERICH4	A6NGS2	130 aa		13.18	□□□□□ -0.3
MATR3-222	ENST00000513678	NUDT19	A8MXV4	375 aa		13.18	□□□□□ -0.3
MATR3-222	ENST00000513678	RAB29	O14966	203 aa		13.18	□□□□□ -0.3
MATR3-222	ENST00000513678	IGHG4	P01861	327 aa		13.18	□□□□□ -0.3
MATR3-222	ENST00000513678	HLA-DRB1	P01911	266 aa		13.18	□□□□□ -0.3
MATR3-222	ENST00000513678	OR5H8	P0DN80	308 aa		13.18	□□□□□ -0.3
MATR3-222	ENST00000513678	HOXD3	P31249	432 aa	Predicted RBP	13.18	□□□□□ -0.3
MATR3-222	ENST00000513678	ACTB	P60709	375 aa		13.18	□□□□□ -0.3
MATR3-222	ENST00000513678	C2orf76	Q3KRA6	126 aa		13.18	□□□□□ -0.3
MATR3-222	ENST00000513678	IL1F10	Q8WWZ1	152 aa		13.18	□□□□□ -0.3
MATR3-222	ENST00000513678	PTX4	Q96A99	478 aa		13.18	□□□□□ -0.3
MATR3-222	ENST00000513678	RBMXL1	Q96E39	390 aa	Known RBP	13.18	□□□□□ -0.3
MATR3-222	ENST00000513678	HSPB9	Q9BQS6	159 aa		13.18	□□□□□ -0.3
MATR3-222	ENST00000513678	AGMAT	Q9BSE5	352 aa		13.18	□□□□□ -0.3
MATR3-222	ENST00000513678	MCRIP2	Q9BUT9	160 aa	Known RBP	13.18	□□□□□ -0.3
MATR3-222	ENST00000513678		Q9N2K0	584 aa		13.18	□□□□□ -0.3
MATR3-222	ENST00000513678	KMT2C	Q8NEZ4	4911 aa	Known RBP	13.18	□□□□□ -0.3
MATR3-222	ENST00000513678	TRDV1	A0A1B0GX56	115 aa		13.17	□□□□□ -0.3
MATR3-222	ENST00000513678	PDCD5	O14737	125 aa		13.17	□□□□□ -0.3
MATR3-222	ENST00000513678	DENR	O43583	198 aa	Known RBP	13.17	□□□□□ -0.3
MATR3-222	ENST00000513678	NDUFA3	O95167	84 aa		13.17	□□□□□ -0.3
MATR3-222	ENST00000513678	ATP6V1G2	O95670	118 aa		13.17	□□□□□ -0.3
MATR3-222	ENST00000513678	RPLP1	P05386	114 aa	Known RBP	13.17	□□□□□ -0.3
MATR3-222	ENST00000513678	OR3A3	P47888	321 aa		13.17	□□□□□ -0.3
MATR3-222	ENST00000513678	HLA-DRB3	P79483	266 aa		13.17	□□□□□ -0.3
MATR3-222	ENST00000513678	MMD	Q15546	238 aa		13.17	□□□□□ -0.3
MATR3-222	ENST00000513678	NPB	Q8NG41	125 aa		13.17	□□□□□ -0.3
MATR3-222	ENST00000513678	EDARADD	Q8WWZ3	215 aa		13.17	□□□□□ -0.3
MATR3-222	ENST00000513678	RAX2	Q96IS3	184 aa		13.17	□□□□□ -0.3
MATR3-222	ENST00000513678	ARHGAP5-AS1	Q96IT6	56 aa		13.17	□□□□□ -0.3
MATR3-222	ENST00000513678	PECR	Q9BY49	303 aa		13.17	□□□□□ -0.3
MATR3-222	ENST00000513678	ZNF107	Q9UII5	783 aa	Predicted RBP	13.17	□□□□□ -0.3
MATR3-222	ENST00000513678	RAB22A	Q9UL26	194 aa		13.17	□□□□□ -0.3
MATR3-222	ENST00000513678	ZBTB25	P24278	435 aa		13.16	□□□□□ -0.3
MATR3-222	ENST00000513678	CDX1	P47902	265 aa	Predicted RBP	13.16	□□□□□ -0.3
MATR3-222	ENST00000513678	VEGFC	P49767	419 aa		13.16	□□□□□ -0.3
MATR3-222	ENST00000513678	CLDN12	P56749	244 aa		13.16	□□□□□ -0.3
MATR3-222	ENST00000513678	CXorf66	Q5JRM2	361 aa	Predicted RBP	13.16	□□□□□ -0.3
MATR3-222	ENST00000513678	PLAC9	Q5JTB6	97 aa		13.16	□□□□□ -0.3
MATR3-222	ENST00000513678	UBE2U	Q5VVX9	321 aa		13.16	□□□□□ -0.3
MATR3-222	ENST00000513678	DPF1	Q92782	380 aa		13.16	□□□□□ -0.3
MATR3-222	ENST00000513678	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.16	□□□□□ -0.3
MATR3-222	ENST00000513678	YTHDF1	Q9BYJ9	559 aa	Known RBP	13.16	□□□□□ -0.3
MATR3-222	ENST00000513678	TOLLIP	Q9H0E2	274 aa		13.16	□□□□□ -0.3
MATR3-222	ENST00000513678	NBEAL2	Q6ZNJ1	2754 aa		13.15	□□□□□ -0.3
MATR3-222	ENST00000513678	TMEM272	A0A1B0GTI8	110 aa		13.15	□□□□□ -0.3
MATR3-222	ENST00000513678	SHISA3	A0PJX4	238 aa		13.15	□□□□□ -0.3
MATR3-222	ENST00000513678	OR5H14	A6NHG9	310 aa		13.15	□□□□□ -0.3
MATR3-222	ENST00000513678	IFITM5	A6NNB3	132 aa		13.15	□□□□□ -0.3
MATR3-222	ENST00000513678	NBR2	O15453	112 aa		13.15	□□□□□ -0.3
MATR3-222	ENST00000513678	ST8SIA5	O15466	376 aa		13.15	□□□□□ -0.3
MATR3-222	ENST00000513678	DIRAS3	O95661	229 aa		13.15	□□□□□ -0.3
MATR3-222	ENST00000513678	RAB6A	P20340	208 aa		13.15	□□□□□ -0.3
MATR3-222	ENST00000513678	VDAC1	P21796	283 aa		13.15	□□□□□ -0.3
MATR3-222	ENST00000513678	PSMB8	P28062	276 aa		13.15	□□□□□ -0.3
MATR3-222	ENST00000513678	MC5R	P33032	325 aa		13.15	□□□□□ -0.3
MATR3-222	ENST00000513678	C5orf64	Q2M2E5	130 aa		13.15	□□□□□ -0.3
MATR3-222	ENST00000513678	LCNL1	Q6ZST4	164 aa		13.15	□□□□□ -0.3
MATR3-222	ENST00000513678	OR5AN1	Q8NGI8	311 aa		13.15	□□□□□ -0.3
MATR3-222	ENST00000513678	SETD6	Q8TBK2	473 aa		13.15	□□□□□ -0.3
MATR3-222	ENST00000513678	MYOZ3	Q8TDC0	251 aa		13.15	□□□□□ -0.3
MATR3-222	ENST00000513678	RITA1	Q96K30	269 aa		13.15	□□□□□ -0.3
MATR3-222	ENST00000513678	DUX3	Q96PT4	197 aa		13.15	□□□□□ -0.3
MATR3-222	ENST00000513678	RNF5	Q99942	180 aa		13.15	□□□□□ -0.3
MATR3-222	ENST00000513678	CMSS1	Q9BQ75	279 aa	Known RBP	13.15	□□□□□ -0.3
MATR3-222	ENST00000513678	PARP12	Q9H0J9	701 aa	Known RBP	13.15	□□□□□ -0.3
MATR3-222	ENST00000513678	CCL24	O00175	119 aa		13.14	□□□□□ -0.31
MATR3-222	ENST00000513678	RBBP9	O75884	186 aa		13.14	□□□□□ -0.31
MATR3-222	ENST00000513678	CT45A6	P0DMU7	189 aa		13.14	□□□□□ -0.31
MATR3-222	ENST00000513678	CT45A5	P0DMU8	189 aa		13.14	□□□□□ -0.31
MATR3-222	ENST00000513678	CT45A7	P0DMV0	189 aa		13.14	□□□□□ -0.31
MATR3-222	ENST00000513678	MYL9	P24844	172 aa		13.14	□□□□□ -0.31
MATR3-222	ENST00000513678	PPIF	P30405	207 aa	Known RBP	13.14	□□□□□ -0.31
MATR3-222	ENST00000513678	CEACAM6	P40199	344 aa		13.14	□□□□□ -0.31
MATR3-222	ENST00000513678	SERPINB10	P48595	397 aa		13.14	□□□□□ -0.31
MATR3-222	ENST00000513678	KIR2DS1	Q14954	304 aa		13.14	□□□□□ -0.31
MATR3-222	ENST00000513678	HES5	Q5TA89	166 aa		13.14	□□□□□ -0.31
MATR3-222	ENST00000513678	OR8U1	Q8NH10	309 aa		13.14	□□□□□ -0.31
MATR3-222	ENST00000513678	KCTD7	Q96MP8	289 aa		13.14	□□□□□ -0.31
MATR3-222	ENST00000513678	C11orf54	Q9H0W9	315 aa	Predicted RBP	13.14	□□□□□ -0.31
MATR3-222	ENST00000513678	OR51J1	Q9H342	316 aa		13.14	□□□□□ -0.31
MATR3-222	ENST00000513678		Q9H521	79 aa		13.14	□□□□□ -0.31
MATR3-222	ENST00000513678	OR1A1	Q9P1Q5	309 aa		13.14	□□□□□ -0.31
MATR3-222	ENST00000513678	KCNK7	Q9Y2U2	307 aa		13.14	□□□□□ -0.31
MATR3-222	ENST00000513678	IGHV7-81	A0A0B4J1V7	117 aa		13.13	□□□□□ -0.31
MATR3-222	ENST00000513678	TRDC	B7Z8K6	153 aa		13.13	□□□□□ -0.31
MATR3-222	ENST00000513678		H0YJW9	148 aa		13.13	□□□□□ -0.31
MATR3-222	ENST00000513678	RAB27B	O00194	218 aa		13.13	□□□□□ -0.31
MATR3-222	ENST00000513678	SCT	P09683	121 aa		13.13	□□□□□ -0.31
MATR3-222	ENST00000513678	SLC2A2	P11168	524 aa	Predicted RBP	13.13	□□□□□ -0.31
MATR3-222	ENST00000513678	RAB3B	P20337	219 aa		13.13	□□□□□ -0.31
MATR3-222	ENST00000513678	FGF9	P31371	208 aa	Predicted RBP	13.13	□□□□□ -0.31
MATR3-222	ENST00000513678	CRIP2	P52943	208 aa	Predicted RBP	13.13	□□□□□ -0.31
MATR3-222	ENST00000513678	FHL3	Q13643	280 aa		13.13	□□□□□ -0.31
MATR3-222	ENST00000513678	DEFB136	Q30KP8	78 aa		13.13	□□□□□ -0.31
MATR3-222	ENST00000513678	RPL39P5	Q59GN2	51 aa		13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms