RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 ELF5Q9UKW6 265 aaPredicted RBP7.68□□□□□ -1.18
RNF4-221ENST00000513643 IGKV1D-8A0A087WSZ0 117 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 LINC01548A6NM66 108 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 RAB29O14966 203 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 FABP7O15540 132 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 RRP9O43818 475 aaKnown RBP7.67□□□□□ -1.18
RNF4-221ENST00000513643 GSTT2P0CG29 244 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 GSTT2BP0CG30 244 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 SMIM18P0DKX4 95 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 DTYMKP23919 212 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 TGFBR1P36897 503 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 RPS19P39019 145 aaKnown RBP7.67□□□□□ -1.18
RNF4-221ENST00000513643 CEACAM6P40199 344 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 SERPINB10P48595 397 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 HNF4GQ14541 408 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 ARL6IP1Q15041 203 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 C2orf68Q2NKX9 166 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 TIMM50Q3ZCQ8 353 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 CDNFQ49AH0 187 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 HIST2H2BDQ6DRA6 164 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 NDUFA11Q86Y39 141 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 NPBQ8NG41 125 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 OR2AK2Q8NG84 335 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 OR5AU1Q8NGC0 362 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 OR5AN1Q8NGI8 311 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 OR13F1Q8NGS4 319 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 OR5H6Q8NGV6 325 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 IL1F10Q8WWZ1 152 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 S1PR3Q99500 378 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 CITED2Q99967 270 aaPredicted RBP7.67□□□□□ -1.18
RNF4-221ENST00000513643 MRPL20Q9BYC9 149 aaKnown RBP7.67□□□□□ -1.18
RNF4-221ENST00000513643 CHMP1AQ9HD42 196 aaPredicted RBP7.67□□□□□ -1.18
RNF4-221ENST00000513643 PIPOXQ9P0Z9 390 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 ETV7Q9Y603 341 aa7.67□□□□□ -1.18
RNF4-221ENST00000513643 A0A0A6YYH2 397 aa7.66□□□□□ -1.18
RNF4-221ENST00000513643 LOC100506127A0A0U1RQW1 187 aa7.66□□□□□ -1.18
RNF4-221ENST00000513643 A6NJ64 397 aa7.66□□□□□ -1.18
RNF4-221ENST00000513643 ST8SIA5O15466 376 aa7.66□□□□□ -1.18
RNF4-221ENST00000513643 AIREO43918 545 aa7.66□□□□□ -1.18
RNF4-221ENST00000513643 SSX5O60225 188 aa7.66□□□□□ -1.18
RNF4-221ENST00000513643 FBXO24O75426 580 aa7.66□□□□□ -1.18
RNF4-221ENST00000513643 SCGNO76038 276 aa7.66□□□□□ -1.18
RNF4-221ENST00000513643 NDUFA3O95167 84 aa7.66□□□□□ -1.18
RNF4-221ENST00000513643 IGF1P05019 195 aa7.66□□□□□ -1.18
RNF4-221ENST00000513643 GSTP1P09211 210 aaKnown RBP7.66□□□□□ -1.18
RNF4-221ENST00000513643 CD3GP09693 182 aa7.66□□□□□ -1.18
RNF4-221ENST00000513643 GPR12P47775 334 aa7.66□□□□□ -1.18
RNF4-221ENST00000513643 CFHR3Q02985 330 aa7.66□□□□□ -1.18
RNF4-221ENST00000513643 HES1Q14469 280 aa7.66□□□□□ -1.18
RNF4-221ENST00000513643 KIR2DS1Q14954 304 aa7.66□□□□□ -1.18
RNF4-221ENST00000513643 RPL39P5Q59GN2 51 aa7.66□□□□□ -1.18
RNF4-221ENST00000513643 IGSF11Q5DX21 431 aa7.66□□□□□ -1.18
RNF4-221ENST00000513643 C10orf99Q6UWK7 81 aa7.66□□□□□ -1.18
RNF4-221ENST00000513643 C11orf44Q8N8P7 122 aa7.66□□□□□ -1.18
RNF4-221ENST00000513643 WFDC9Q8NEX5 89 aa7.66□□□□□ -1.18
RNF4-221ENST00000513643 LGALS14Q8TCE9 139 aa7.66□□□□□ -1.18
RNF4-221ENST00000513643 EDARADDQ8WWZ3 215 aa7.66□□□□□ -1.18
RNF4-221ENST00000513643 ATG5Q9H1Y0 275 aa7.66□□□□□ -1.18
RNF4-221ENST00000513643 DCSTAMPQ9H295 470 aa7.66□□□□□ -1.18
RNF4-221ENST00000513643 RHBDL2Q9NX52 303 aa7.66□□□□□ -1.18
RNF4-221ENST00000513643 RDH8Q9NYR8 311 aa7.66□□□□□ -1.18
RNF4-221ENST00000513643 ZNF230Q9UIE0 474 aaPredicted RBP7.66□□□□□ -1.18
RNF4-221ENST00000513643 SPATA2Q9UM82 520 aa7.66□□□□□ -1.18
RNF4-221ENST00000513643 H0YJW9 148 aa7.65□□□□□ -1.18
RNF4-221ENST00000513643 OPN1MWP04001 364 aa7.65□□□□□ -1.18
RNF4-221ENST00000513643 CSF1P09603 554 aa7.65□□□□□ -1.18
RNF4-221ENST00000513643 OPN1MW2P0DN77 364 aa7.65□□□□□ -1.18
RNF4-221ENST00000513643 OPN1MW3P0DN78 364 aa7.65□□□□□ -1.18
RNF4-221ENST00000513643 ACTBP60709 375 aa7.65□□□□□ -1.18
RNF4-221ENST00000513643 MXD1Q05195 221 aa7.65□□□□□ -1.18
RNF4-221ENST00000513643 PNLIPRP3Q17RR3 467 aa7.65□□□□□ -1.18
RNF4-221ENST00000513643 TET2Q6N021 2002 aaPredicted RBP7.65□□□□□ -1.18
RNF4-221ENST00000513643 CENPVQ7Z7K6 275 aaPredicted RBP7.65□□□□□ -1.18
RNF4-221ENST00000513643 CROCCP3Q8IVE0 287 aa7.65□□□□□ -1.18
RNF4-221ENST00000513643 H1FOOQ8IZA3 346 aaPredicted RBP7.65□□□□□ -1.18
RNF4-221ENST00000513643 RNF152Q8N8N0 203 aa7.65□□□□□ -1.18
RNF4-221ENST00000513643 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.65□□□□□ -1.18
RNF4-221ENST00000513643 SETD6Q8TBK2 473 aa7.65□□□□□ -1.18
RNF4-221ENST00000513643 SLC25A46Q96AG3 418 aa7.65□□□□□ -1.18
RNF4-221ENST00000513643 C5orf30Q96GV9 206 aa7.65□□□□□ -1.18
RNF4-221ENST00000513643 ABHD14BQ96IU4 210 aa7.65□□□□□ -1.18
RNF4-221ENST00000513643 RNF5Q99942 180 aa7.65□□□□□ -1.18
RNF4-221ENST00000513643 FUNDC2Q9BWH2 189 aa7.65□□□□□ -1.18
RNF4-221ENST00000513643 PLXNB1O43157 2135 aa7.64□□□□□ -1.19
RNF4-221ENST00000513643 OR5H14A6NHG9 310 aa7.64□□□□□ -1.19
RNF4-221ENST00000513643 HLA-DRB1P01911 266 aa7.64□□□□□ -1.19
RNF4-221ENST00000513643 MC5RP33032 325 aa7.64□□□□□ -1.19
RNF4-221ENST00000513643 ALDH3B2P48448 385 aa7.64□□□□□ -1.19
RNF4-221ENST00000513643 LINC00205P59089 165 aa7.64□□□□□ -1.19
RNF4-221ENST00000513643 PITPNAQ00169 270 aa7.64□□□□□ -1.19
RNF4-221ENST00000513643 CTF1Q16619 201 aa7.64□□□□□ -1.19
RNF4-221ENST00000513643 C19orf54Q5BKX5 351 aa7.64□□□□□ -1.19
RNF4-221ENST00000513643 IDNKQ5T6J7 187 aa7.64□□□□□ -1.19
RNF4-221ENST00000513643 STPG2Q8N412 459 aa7.64□□□□□ -1.19
RNF4-221ENST00000513643 ZNF383Q8NA42 475 aa7.64□□□□□ -1.19
RNF4-221ENST00000513643 CHPT1Q8WUD6 406 aa7.64□□□□□ -1.19
RNF4-221ENST00000513643 NOL4LQ96MY1 436 aaPredicted RBP7.64□□□□□ -1.19
RNF4-221ENST00000513643 HSPB9Q9BQS6 159 aa7.64□□□□□ -1.19
RNF4-221ENST00000513643 VCX3AQ9NNX9 186 aa7.64□□□□□ -1.19
RNF4-221ENST00000513643 ZNF107Q9UII5 783 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms