RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 ZNRF1Q8ND25 227 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 OR52L2PQ8NGH6 319 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 OR8U1Q8NH10 309 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 ST8SIA2Q92186 375 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 RRNAD1Q96FB5 475 aaKnown RBP6.95□□□□□ -1.3
RNF4-220ENST00000513578 AGMATQ9BSE5 352 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 DYNLRB1Q9NP97 96 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 OR2S2Q9NQN1 319 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 TMEM106BQ9NUM4 274 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 TAS2R3Q9NYW6 316 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 GSKIPQ9P0R6 139 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 LPAR3Q9UBY5 353 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 CLN8Q9UBY8 286 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 RBM7Q9Y580 266 aaKnown RBP6.95□□□□□ -1.3
RNF4-220ENST00000513578 USF3Q68DE3 2245 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 SPENQ96T58 3664 aaKnown RBP6.94□□□□□ -1.3
RNF4-220ENST00000513578 BOD1L1Q8NFC6 3051 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 TRGV10A0A0A0MS01 117 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 hADV38S2A0JD32 116 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 ATG12O94817 140 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 CLDN14O95500 239 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 GAPDHP04406 335 aaKnown RBP6.94□□□□□ -1.3
RNF4-220ENST00000513578 SERPINE2P07093 398 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 PLA2G2AP14555 144 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 GRNP28799 593 aaKnown RBP6.94□□□□□ -1.3
RNF4-220ENST00000513578 SSTR5P35346 364 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 RAB7AP51149 207 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 ARHGDIBP52566 201 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 RAB14P61106 215 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 EIF5AP63241 154 aaKnown RBP6.94□□□□□ -1.3
RNF4-220ENST00000513578 EDDM3AQ14507 147 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 GNMTQ14749 295 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 CDSNQ15517 529 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 C17orf58Q2M2W7 97 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 ZNF585BQ52M93 769 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 FAM201AQ5SY85 155 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 THOC7Q6I9Y2 204 aaKnown RBP6.94□□□□□ -1.3
RNF4-220ENST00000513578 MEX3BQ6ZN04 569 aaKnown RBP6.94□□□□□ -1.3
RNF4-220ENST00000513578 FAM219AQ8IW50 185 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 SLC7A5P1Q8MH63 180 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 MUC15Q8N387 334 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 TPRX1Q8N7U7 411 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.94□□□□□ -1.3
RNF4-220ENST00000513578 DMBX1Q8NFW5 382 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 LRRC20Q8TCA0 184 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 NEUROG1Q92886 237 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 HSD17B10Q99714 261 aaKnown RBP6.94□□□□□ -1.3
RNF4-220ENST00000513578 PARP12Q9H0J9 701 aaKnown RBP6.94□□□□□ -1.3
RNF4-220ENST00000513578 SLC25A32Q9H2D1 315 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 CYTL1Q9NRR1 136 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 GFOD1Q9NXC2 390 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 COA4Q9NYJ1 87 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 CALYQ9NYX4 217 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 LAMP3Q9UQV4 416 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 LINC00312Q9Y6C7 94 aa6.94□□□□□ -1.3
RNF4-220ENST00000513578 DIDO1Q9BTC0 2240 aaKnown RBP6.94□□□□□ -1.3
RNF4-220ENST00000513578 IGHV1-69-2A0A0G2JMI3 117 aa6.93□□□□□ -1.3
RNF4-220ENST00000513578 MSGN1A6NI15 193 aa6.93□□□□□ -1.3
RNF4-220ENST00000513578 FAM90A26D6RGX4 464 aa6.93□□□□□ -1.3
RNF4-220ENST00000513578 RBFOX2O43251 390 aaKnown RBP eCLIP6.93□□□□□ -1.3
RNF4-220ENST00000513578 TNFSF12O43508 249 aa6.93□□□□□ -1.3
RNF4-220ENST00000513578 GPR137BO60478 399 aa6.93□□□□□ -1.3
RNF4-220ENST00000513578 GOSR1O95249 250 aa6.93□□□□□ -1.3
RNF4-220ENST00000513578 PLAUP00749 431 aa6.93□□□□□ -1.3
RNF4-220ENST00000513578 IGKV1-39P01597 117 aa6.93□□□□□ -1.3
RNF4-220ENST00000513578 GYPAP02724 150 aa6.93□□□□□ -1.3
RNF4-220ENST00000513578 IGKV1D-39P04432 117 aa6.93□□□□□ -1.3
RNF4-220ENST00000513578 TPT1P13693 172 aaKnown RBP6.93□□□□□ -1.3
RNF4-220ENST00000513578 PVALBP20472 110 aaPredicted RBP6.93□□□□□ -1.3
RNF4-220ENST00000513578 RPL12P30050 165 aaKnown RBP6.93□□□□□ -1.3
RNF4-220ENST00000513578 PPP1CCP36873 323 aaKnown RBP6.93□□□□□ -1.3
RNF4-220ENST00000513578 NKX2-1P43699 371 aaPredicted RBP6.93□□□□□ -1.3
RNF4-220ENST00000513578 EDDM3BP56851 147 aa6.93□□□□□ -1.3
RNF4-220ENST00000513578 S100A10P60903 97 aa6.93□□□□□ -1.3
RNF4-220ENST00000513578 MRPS11P82912 194 aaKnown RBP6.93□□□□□ -1.3
RNF4-220ENST00000513578 TCF23Q7RTU1 214 aa6.93□□□□□ -1.3
RNF4-220ENST00000513578 OR8H3Q8N146 312 aa6.93□□□□□ -1.3
RNF4-220ENST00000513578 UBALD1Q8TB05 177 aa6.93□□□□□ -1.3
RNF4-220ENST00000513578 CD300LFQ8TDQ1 290 aa6.93□□□□□ -1.3
RNF4-220ENST00000513578 GPR146Q96CH1 333 aa6.93□□□□□ -1.3
RNF4-220ENST00000513578 C5orf30Q96GV9 206 aa6.93□□□□□ -1.3
RNF4-220ENST00000513578 CCL13Q99616 98 aa6.93□□□□□ -1.3
RNF4-220ENST00000513578 DCTN5Q9BTE1 182 aa6.93□□□□□ -1.3
RNF4-220ENST00000513578 OR2D2Q9H210 308 aa6.93□□□□□ -1.3
RNF4-220ENST00000513578 SDHAF2Q9NX18 166 aa6.93□□□□□ -1.3
RNF4-220ENST00000513578 IDI2-AS1Q9NZ38 188 aa6.93□□□□□ -1.3
RNF4-220ENST00000513578 KCNS2Q9ULS6 477 aa6.93□□□□□ -1.3
RNF4-220ENST00000513578 LSM5Q9Y4Y9 91 aaKnown RBP6.93□□□□□ -1.3
RNF4-220ENST00000513578 DOCK11Q5JSL3 2073 aa6.92□□□□□ -1.3
RNF4-220ENST00000513578 HIVEP3Q5T1R4 2406 aa6.92□□□□□ -1.3
RNF4-220ENST00000513578 FAM90A9PA6NNJ1 464 aa6.92□□□□□ -1.3
RNF4-220ENST00000513578 KIAA1324LA8MWY0 1029 aaPredicted RBP6.92□□□□□ -1.3
RNF4-220ENST00000513578 F5H0A9 414 aaPredicted RBP6.92□□□□□ -1.3
RNF4-220ENST00000513578 ADAM20O43506 726 aa6.92□□□□□ -1.3
RNF4-220ENST00000513578 CLDN1O95832 211 aa6.92□□□□□ -1.3
RNF4-220ENST00000513578 P0C879 139 aa6.92□□□□□ -1.3
RNF4-220ENST00000513578 KIR2DS2P43631 304 aa6.92□□□□□ -1.3
RNF4-220ENST00000513578 LPAR6P43657 344 aa6.92□□□□□ -1.3
RNF4-220ENST00000513578 SRSF1Q07955 248 aaKnown RBP eCLIP6.92□□□□□ -1.34e-6■□□□□ 8.1
RNF4-220ENST00000513578 C11orf71Q6IPW1 123 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms