RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 CLCC1Q96S66 551 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 CNTD2Q9H8S5 307 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 CLN8Q9UBY8 286 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 MALRD1Q5VYJ5 2156 aa13.69□□□□□ -0.22
HMGCL-209ENST00000513148 TEP1Q99973 2627 aaKnown RBP13.69□□□□□ -0.22
HMGCL-209ENST00000513148 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.68□□□□□ -0.22
HMGCL-209ENST00000513148 SVEP1Q4LDE5 3571 aa13.68□□□□□ -0.22
HMGCL-209ENST00000513148 ZNF705EA8MWA4 302 aaPredicted RBP13.68□□□□□ -0.22
HMGCL-209ENST00000513148 GPR37O15354 613 aa13.68□□□□□ -0.22
HMGCL-209ENST00000513148 SLC31A2O15432 143 aa13.68□□□□□ -0.22
HMGCL-209ENST00000513148 CD5LO43866 347 aa13.68□□□□□ -0.22
HMGCL-209ENST00000513148 LYL1P12980 280 aa13.68□□□□□ -0.22
HMGCL-209ENST00000513148 DUSP1P28562 367 aa13.68□□□□□ -0.22
HMGCL-209ENST00000513148 SPCS3P61009 180 aa13.68□□□□□ -0.22
HMGCL-209ENST00000513148 SSX9Q7RTT3 188 aa13.68□□□□□ -0.22
HMGCL-209ENST00000513148 FAM58AQ8N1B3 248 aa13.68□□□□□ -0.22
HMGCL-209ENST00000513148 COMMD1Q8N668 190 aa13.68□□□□□ -0.22
HMGCL-209ENST00000513148 CD177Q8N6Q3 437 aa13.68□□□□□ -0.22
HMGCL-209ENST00000513148 RNASE11Q8TAA1 199 aaKnown RBP13.68□□□□□ -0.22
HMGCL-209ENST00000513148 GAFA1Q96PS6 74 aa13.68□□□□□ -0.22
HMGCL-209ENST00000513148 NMES1Q9C002 83 aa13.68□□□□□ -0.22
HMGCL-209ENST00000513148 DVL1O14640 695 aa13.68□□□□□ -0.22
HMGCL-209ENST00000513148 IFNA17P01571 189 aa13.68□□□□□ -0.22
HMGCL-209ENST00000513148 F2RL1P55085 397 aa13.68□□□□□ -0.22
HMGCL-209ENST00000513148 MEF2DQ14814 521 aa13.68□□□□□ -0.22
HMGCL-209ENST00000513148 RSU1Q15404 277 aa13.68□□□□□ -0.22
HMGCL-209ENST00000513148 ZNF841Q6ZN19 808 aa13.68□□□□□ -0.22
HMGCL-209ENST00000513148 REC114Q7Z4M0 266 aa13.68□□□□□ -0.22
HMGCL-209ENST00000513148 SAXO1Q8IYX7 474 aa13.68□□□□□ -0.22
HMGCL-209ENST00000513148 ZSCAN4Q8NAM6 433 aaPredicted RBP13.68□□□□□ -0.22
HMGCL-209ENST00000513148 ZNRF1Q8ND25 227 aa13.68□□□□□ -0.22
HMGCL-209ENST00000513148 C1orf159Q96HA4 380 aa13.68□□□□□ -0.22
HMGCL-209ENST00000513148 S100A13Q99584 98 aa13.68□□□□□ -0.22
HMGCL-209ENST00000513148 PHB2Q99623 299 aa13.68□□□□□ -0.22
HMGCL-209ENST00000513148 YAE1D1Q9NRH1 226 aa13.68□□□□□ -0.22
HMGCL-209ENST00000513148 METRNQ9UJH8 293 aa13.68□□□□□ -0.22
HMGCL-209ENST00000513148 DOCK11Q5JSL3 2073 aa13.67□□□□□ -0.22
HMGCL-209ENST00000513148 A0A1W2PPE3 182 aa13.67□□□□□ -0.22
HMGCL-209ENST00000513148 FCN3O75636 299 aa13.67□□□□□ -0.22
HMGCL-209ENST00000513148 KNG1P01042 644 aa13.67□□□□□ -0.22
HMGCL-209ENST00000513148 ZNF735P0CB33 412 aa13.67□□□□□ -0.22
HMGCL-209ENST00000513148 CPT2P23786 658 aa13.67□□□□□ -0.22
HMGCL-209ENST00000513148 PRDX2P32119 198 aa13.67□□□□□ -0.22
HMGCL-209ENST00000513148 CDX1P47902 265 aaPredicted RBP13.67□□□□□ -0.22
HMGCL-209ENST00000513148 IL13RA1P78552 427 aa13.67□□□□□ -0.22
HMGCL-209ENST00000513148 WDR25Q64LD2 544 aaPredicted RBP13.67□□□□□ -0.22
HMGCL-209ENST00000513148 OR52W1Q6IF63 320 aa13.67□□□□□ -0.22
HMGCL-209ENST00000513148 FAM166AQ6J272 317 aa13.67□□□□□ -0.22
HMGCL-209ENST00000513148 ZNF788Q6ZQV5 615 aa13.67□□□□□ -0.22
HMGCL-209ENST00000513148 ZNF565Q8N9K5 539 aa13.67□□□□□ -0.22
HMGCL-209ENST00000513148 OR4D6Q8NGJ1 314 aa13.67□□□□□ -0.22
HMGCL-209ENST00000513148 LYPD6BQ8NI32 183 aa13.67□□□□□ -0.22
HMGCL-209ENST00000513148 HIF1ANQ9NWT6 349 aa13.67□□□□□ -0.22
HMGCL-209ENST00000513148 KAAG1Q9UBP8 84 aa13.67□□□□□ -0.22
HMGCL-209ENST00000513148 MRPS28Q9Y2Q9 187 aaKnown RBP13.67□□□□□ -0.22
HMGCL-209ENST00000513148 MEGF11A6BM72 1044 aa13.66□□□□□ -0.22
HMGCL-209ENST00000513148 TAAR5O14804 337 aa13.66□□□□□ -0.22
HMGCL-209ENST00000513148 FOXH1O75593 365 aa13.66□□□□□ -0.22
HMGCL-209ENST00000513148 SERPINA2P20848 420 aa13.66□□□□□ -0.22
HMGCL-209ENST00000513148 C14orf144Q96I85 54 aa13.66□□□□□ -0.22
HMGCL-209ENST00000513148 PRRT1Q99946 306 aa13.66□□□□□ -0.22
HMGCL-209ENST00000513148 PARP11Q9NR21 331 aa13.66□□□□□ -0.22
HMGCL-209ENST00000513148 KIAA1324LA8MWY0 1029 aaPredicted RBP13.66□□□□□ -0.22
HMGCL-209ENST00000513148 NDUFB3O43676 98 aa13.66□□□□□ -0.22
HMGCL-209ENST00000513148 PGAM2P15259 253 aa13.66□□□□□ -0.22
HMGCL-209ENST00000513148 SLC22A6Q4U2R8 563 aa13.66□□□□□ -0.22
HMGCL-209ENST00000513148 GLIPR1L1Q6UWM5 242 aa13.66□□□□□ -0.22
HMGCL-209ENST00000513148 BTNL8Q6UX41 500 aa13.66□□□□□ -0.22
HMGCL-209ENST00000513148 TMEM186Q96B77 213 aa13.66□□□□□ -0.22
HMGCL-209ENST00000513148 METTL9Q9H1A3 318 aa13.66□□□□□ -0.22
HMGCL-209ENST00000513148 TRAV18A0A075B6X5 111 aa13.65□□□□□ -0.22
HMGCL-209ENST00000513148 HLA-AP01891 365 aaKnown RBP13.65□□□□□ -0.22
HMGCL-209ENST00000513148 HIST1H1BP16401 226 aaKnown RBP13.65□□□□□ -0.22
HMGCL-209ENST00000513148 PDCD1Q15116 288 aa13.65□□□□□ -0.22
HMGCL-209ENST00000513148 RHEBQ15382 184 aa13.65□□□□□ -0.22
HMGCL-209ENST00000513148 LRRC10Q5BKY1 277 aa13.65□□□□□ -0.22
HMGCL-209ENST00000513148 OR10R2Q8NGX6 335 aa13.65□□□□□ -0.22
HMGCL-209ENST00000513148 KIRREL1Q96J84 757 aa13.65□□□□□ -0.22
HMGCL-209ENST00000513148 SULT4A1Q9BR01 284 aa13.65□□□□□ -0.22
HMGCL-209ENST00000513148 C2orf88Q9BSF0 95 aa13.65□□□□□ -0.22
HMGCL-209ENST00000513148 CHMP1AQ9HD42 196 aaPredicted RBP13.65□□□□□ -0.22
HMGCL-209ENST00000513148 GFOD1Q9NXC2 390 aa13.65□□□□□ -0.22
HMGCL-209ENST00000513148 SLC25A10Q9UBX3 287 aaPredicted RBP13.65□□□□□ -0.22
HMGCL-209ENST00000513148 KCNS2Q9ULS6 477 aa13.65□□□□□ -0.22
HMGCL-209ENST00000513148 A0A1W2PP11 408 aa13.64□□□□□ -0.23
HMGCL-209ENST00000513148 HAND1O96004 215 aa13.64□□□□□ -0.23
HMGCL-209ENST00000513148 CSTBP04080 98 aaKnown RBP13.64□□□□□ -0.23
HMGCL-209ENST00000513148 CD37P11049 281 aa13.64□□□□□ -0.23
HMGCL-209ENST00000513148 NQO2P16083 231 aa13.64□□□□□ -0.23
HMGCL-209ENST00000513148 NDUFB7P17568 137 aa13.64□□□□□ -0.23
HMGCL-209ENST00000513148 NPY4RP50391 375 aa13.64□□□□□ -0.23
HMGCL-209ENST00000513148 COL10A1Q03692 680 aa13.64□□□□□ -0.23
HMGCL-209ENST00000513148 LYPD6Q86Y78 171 aa13.64□□□□□ -0.23
HMGCL-209ENST00000513148 TMED6Q8WW62 240 aa13.64□□□□□ -0.23
HMGCL-209ENST00000513148 SDSLQ96GA7 329 aa13.64□□□□□ -0.23
HMGCL-209ENST00000513148 AQP10Q96PS8 301 aa13.64□□□□□ -0.23
HMGCL-209ENST00000513148 DUS4LO95620 317 aaKnown RBP13.64□□□□□ -0.23
HMGCL-209ENST00000513148 CEACAM6P40199 344 aa13.64□□□□□ -0.23
HMGCL-209ENST00000513148 SULT1A2P50226 295 aa13.64□□□□□ -0.23
HMGCL-209ENST00000513148 FGF12P61328 243 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms