RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 SPNS2Q8IVW8 549 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 OR5H6Q8NGV6 325 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 LHFPL5Q8TAF8 219 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 CTHRC1Q96CG8 243 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 DLL3Q9NYJ7 618 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 CHCHD2Q9Y6H1 151 aaPredicted RBP3.65□□□□□ -1.83
VCAN-209ENST00000513016 IGHV2OR16-5A0A0B4J2B6 119 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 PYCARD-AS1I3L0S3 204 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 ZNF737O75373 536 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 PRSS12P56730 875 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 HSPE1P61604 102 aaKnown RBP3.65□□□□□ -1.83
VCAN-209ENST00000513016 ABHD14BQ96IU4 210 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 MS4A10Q96PG2 267 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 NRTNQ99748 197 aa3.65□□□□□ -1.83
VCAN-209ENST00000513016 NXF2Q9GZY0 626 aaKnown RBP3.65□□□□□ -1.83
VCAN-209ENST00000513016 PARP12Q9H0J9 701 aaKnown RBP3.65□□□□□ -1.83
VCAN-209ENST00000513016 URB1O60287 2271 aaKnown RBP3.64□□□□□ -1.83
VCAN-209ENST00000513016 A0A1W2PPE3 182 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 SLC25A17O43808 307 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 PDGFAP04085 211 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 PTHLHP12272 177 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 SRD5A1P18405 259 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 CA7P43166 264 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 COLCA1Q6ZS62 124 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 ZNF826PQ6ZT77 177 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 GBGT1Q8N5D6 347 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 OR13A1Q8NGR1 328 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 ZNF488Q96MN9 340 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 QTRT1Q9BXR0 403 aaKnown RBP3.64□□□□□ -1.83
VCAN-209ENST00000513016 ANKRD20A5PA0PJZ0 165 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 M6PRP20645 277 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 FOXL2P58012 376 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 CEBPEQ15744 281 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 GSX2Q9BZM3 304 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 FLVCR2Q9UPI3 526 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 COL11A2P13942 1736 aaPredicted RBP3.64□□□□□ -1.83
VCAN-209ENST00000513016 IGKV3D-11A0A0A0MRZ8 115 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 SNURFLB1AK76 121 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 KBTBD11O94819 623 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 UMODP07911 640 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 KIAA0141Q14154 515 aaPredicted RBP3.64□□□□□ -1.83
VCAN-209ENST00000513016 APCDD1LQ8NCL9 501 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 OR10AC1Q8NH08 325 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 MYOZ3Q8TDC0 251 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 MIEN1Q9BRT3 115 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 ISG15P05161 165 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 MAS1LP35410 378 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 DLX1P56177 255 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 POLR2GP62487 172 aaKnown RBP eCLIP3.64□□□□□ -1.83
VCAN-209ENST00000513016 FAAP20Q6NZ36 180 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 DTX2Q86UW9 622 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 MRGPRFQ96AM1 343 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 PACRGQ96M98 296 aaPredicted RBP3.64□□□□□ -1.83
VCAN-209ENST00000513016 WDFY2Q96P53 400 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 COL25A1Q9BXS0 654 aaPredicted RBP3.64□□□□□ -1.83
VCAN-209ENST00000513016 TLNRD1Q9H1K6 362 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 BRWD3Q6RI45 1802 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 FAM90A26D6RGX4 464 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 E9PQ18 207 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 LILRA1O75019 489 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 DUSP14O95147 198 aaKnown RBP3.64□□□□□ -1.83
VCAN-209ENST00000513016 ZP3P21754 424 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 IGHV1-2P23083 117 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 SULT1A1P50225 295 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 PPP1R1AQ13522 171 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 OR52B4Q8NGK2 314 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 OSR1Q8TAX0 266 aaPredicted RBP3.64□□□□□ -1.83
VCAN-209ENST00000513016 RHOVQ96L33 236 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 MRPS18AQ9NVS2 196 aaKnown RBP3.64□□□□□ -1.83
VCAN-209ENST00000513016 SEMA5BQ9P283 1151 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 VIRMAQ69YN4 1812 aaKnown RBP3.64□□□□□ -1.83
VCAN-209ENST00000513016 IGLV1-36A0A0B4J1U3 117 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 FCGR3AP08637 254 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 VSIG8P0DPA2 414 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 GATA3P23771 443 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 FAM53AQ6NSI3 398 aaPredicted RBP3.64□□□□□ -1.83
VCAN-209ENST00000513016 POC1AQ8NBT0 407 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 COPS9Q8WXC6 57 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 ADAT3Q96EY9 351 aaPredicted RBP3.64□□□□□ -1.83
VCAN-209ENST00000513016 C19orf24Q9BVV8 132 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 MRPL37Q9BZE1 423 aaKnown RBP3.64□□□□□ -1.83
VCAN-209ENST00000513016 HSF4Q9ULV5 492 aa3.64□□□□□ -1.83
VCAN-209ENST00000513016 PRRC2BQ5JSZ5 2229 aaKnown RBP3.64□□□□□ -1.83
VCAN-209ENST00000513016 H0Y980 276 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 MOSP00540 346 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 RPL35P42766 123 aaKnown RBP3.63□□□□□ -1.83
VCAN-209ENST00000513016 TIAL1Q01085 375 aaKnown RBP eCLIP3.63□□□□□ -1.83
VCAN-209ENST00000513016 FAM74A3Q4VXF1 159 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 GLRX5Q86SX6 157 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 NECAP1Q8NC96 275 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 SIPA1L3O60292 1781 aaPredicted RBP3.63□□□□□ -1.83
VCAN-209ENST00000513016 A0A0A6YYJ9 748 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 TMEM189A5PLL7 270 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 J3QR89 54 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 CRXO43186 299 aaPredicted RBP3.63□□□□□ -1.83
VCAN-209ENST00000513016 PDE6DO43924 150 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 WNT2P09544 360 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 OR5AL1P0C617 328 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 IL11P20809 199 aa3.63□□□□□ -1.83
VCAN-209ENST00000513016 DYNLT3P51808 116 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms