RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 CCL21O00585 134 aa10.93□□□□□ -0.66
DEPDC1B-206ENST00000512452 ITGB1BP1O14713 200 aa10.93□□□□□ -0.66
DEPDC1B-206ENST00000512452 ST8SIA3O43173 380 aa10.93□□□□□ -0.66
DEPDC1B-206ENST00000512452 SERPINE2P07093 398 aa10.93□□□□□ -0.66
DEPDC1B-206ENST00000512452 TPT1P13693 172 aaKnown RBP10.93□□□□□ -0.66
DEPDC1B-206ENST00000512452 EFNB3Q15768 340 aa10.93□□□□□ -0.66
DEPDC1B-206ENST00000512452 NMSQ5H8A3 153 aa10.93□□□□□ -0.66
DEPDC1B-206ENST00000512452 GPR157Q5UAW9 335 aa10.93□□□□□ -0.66
DEPDC1B-206ENST00000512452 STUMQ69YW2 141 aa10.93□□□□□ -0.66
DEPDC1B-206ENST00000512452 THOC7Q6I9Y2 204 aaKnown RBP10.93□□□□□ -0.66
DEPDC1B-206ENST00000512452 MEX3BQ6ZN04 569 aaKnown RBP10.93□□□□□ -0.66
DEPDC1B-206ENST00000512452 C5orf24Q7Z6I8 188 aa10.93□□□□□ -0.66
DEPDC1B-206ENST00000512452 ZNF645Q8N7E2 425 aa10.93□□□□□ -0.66
DEPDC1B-206ENST00000512452 OR1L1Q8NH94 360 aa10.93□□□□□ -0.66
DEPDC1B-206ENST00000512452 LRRC20Q8TCA0 184 aa10.93□□□□□ -0.66
DEPDC1B-206ENST00000512452 EDARADDQ8WWZ3 215 aa10.93□□□□□ -0.66
DEPDC1B-206ENST00000512452 LSM10Q969L4 123 aaKnown RBP10.93□□□□□ -0.66
DEPDC1B-206ENST00000512452 RRNAD1Q96FB5 475 aaKnown RBP10.93□□□□□ -0.66
DEPDC1B-206ENST00000512452 ZNF471Q9BX82 626 aaPredicted RBP10.93□□□□□ -0.66
DEPDC1B-206ENST00000512452 PLEKHF2Q9H8W4 249 aa10.93□□□□□ -0.66
DEPDC1B-206ENST00000512452 RBM7Q9Y580 266 aaKnown RBP10.93□□□□□ -0.66
DEPDC1B-206ENST00000512452 CHD3Q12873 2000 aaKnown RBP10.92□□□□□ -0.66
DEPDC1B-206ENST00000512452 TRAV39A0A0B4J263 110 aa10.92□□□□□ -0.66
DEPDC1B-206ENST00000512452 C15orf65H3BRN8 121 aa10.92□□□□□ -0.66
DEPDC1B-206ENST00000512452 SPDEFO95238 335 aa10.92□□□□□ -0.66
DEPDC1B-206ENST00000512452 IGLV2-14P01704 120 aa10.92□□□□□ -0.66
DEPDC1B-206ENST00000512452 MBPP02686 304 aaPredicted RBP10.92□□□□□ -0.66
DEPDC1B-206ENST00000512452 GAPDHP04406 335 aaKnown RBP10.92□□□□□ -0.66
DEPDC1B-206ENST00000512452 CD3EP07766 207 aa10.92□□□□□ -0.66
DEPDC1B-206ENST00000512452 P2RY1P47900 373 aa10.92□□□□□ -0.66
DEPDC1B-206ENST00000512452 GLIPR1P48060 266 aa10.92□□□□□ -0.66
DEPDC1B-206ENST00000512452 P2RX3P56373 397 aa10.92□□□□□ -0.66
DEPDC1B-206ENST00000512452 C1orf87Q8N0U7 546 aa10.92□□□□□ -0.66
DEPDC1B-206ENST00000512452 PRR18Q8N4B5 295 aa10.92□□□□□ -0.66
DEPDC1B-206ENST00000512452 OR13A1Q8NGR1 328 aa10.92□□□□□ -0.66
DEPDC1B-206ENST00000512452 MRGPRDQ8TDS7 321 aa10.92□□□□□ -0.66
DEPDC1B-206ENST00000512452 ZNF665Q9H7R5 613 aa10.92□□□□□ -0.66
DEPDC1B-206ENST00000512452 JPT1Q9UK76 154 aa10.92□□□□□ -0.66
DEPDC1B-206ENST00000512452 PPP1R3CQ9UQK1 317 aa10.92□□□□□ -0.66
DEPDC1B-206ENST00000512452 NSD1Q96L73 2696 aaPredicted RBP10.92□□□□□ -0.66
DEPDC1B-206ENST00000512452 PRR14LQ5THK1 2151 aa10.92□□□□□ -0.66
DEPDC1B-206ENST00000512452 A0A1B0GU03 582 aa10.91□□□□□ -0.66
DEPDC1B-206ENST00000512452 ANKRD34BA5PLL1 514 aa10.91□□□□□ -0.66
DEPDC1B-206ENST00000512452 NKX2-6A6NCS4 301 aa10.91□□□□□ -0.66
DEPDC1B-206ENST00000512452 SHISA9B4DS77 424 aa10.91□□□□□ -0.66
DEPDC1B-206ENST00000512452 F2RL2O00254 374 aa10.91□□□□□ -0.66
DEPDC1B-206ENST00000512452 NMBP08949 121 aa10.91□□□□□ -0.66
DEPDC1B-206ENST00000512452 OR8U9P0C7N5 309 aa10.91□□□□□ -0.66
DEPDC1B-206ENST00000512452 HKR1P10072 659 aa10.91□□□□□ -0.66
DEPDC1B-206ENST00000512452 RRASP10301 218 aa10.91□□□□□ -0.66
DEPDC1B-206ENST00000512452 PVALBP20472 110 aaPredicted RBP10.91□□□□□ -0.66
DEPDC1B-206ENST00000512452 RPL12P30050 165 aaKnown RBP10.91□□□□□ -0.66
DEPDC1B-206ENST00000512452 NKX2-1P43699 371 aaPredicted RBP10.91□□□□□ -0.66
DEPDC1B-206ENST00000512452 CATR1Q13166 79 aa10.91□□□□□ -0.66
DEPDC1B-206ENST00000512452 GNMTQ14749 295 aa10.91□□□□□ -0.66
DEPDC1B-206ENST00000512452 BEX5Q5H9J7 111 aa10.91□□□□□ -0.66
DEPDC1B-206ENST00000512452 EIF5AL1Q6IS14 154 aaKnown RBP10.91□□□□□ -0.66
DEPDC1B-206ENST00000512452 ALKAL2Q6UX46 152 aa10.91□□□□□ -0.66
DEPDC1B-206ENST00000512452 ZNF66Q6ZN08 573 aa10.91□□□□□ -0.66
DEPDC1B-206ENST00000512452 ZNF788Q6ZQV5 615 aa10.91□□□□□ -0.66
DEPDC1B-206ENST00000512452 PDZD9Q8IXQ8 264 aa10.91□□□□□ -0.66
DEPDC1B-206ENST00000512452 DRAM1Q8N682 238 aa10.91□□□□□ -0.66
DEPDC1B-206ENST00000512452 BOLLQ8N9W6 283 aaKnown RBP10.91□□□□□ -0.66
DEPDC1B-206ENST00000512452 OR8U1Q8NH10 309 aa10.91□□□□□ -0.66
DEPDC1B-206ENST00000512452 ARL11Q969Q4 196 aa10.91□□□□□ -0.66
DEPDC1B-206ENST00000512452 MS4A5Q9H3V2 200 aa10.91□□□□□ -0.66
DEPDC1B-206ENST00000512452 CYTL1Q9NRR1 136 aa10.91□□□□□ -0.66
DEPDC1B-206ENST00000512452 KCNS2Q9ULS6 477 aa10.91□□□□□ -0.66
DEPDC1B-206ENST00000512452 TRAV38-1A0A0B4J264 116 aa10.9□□□□□ -0.66
DEPDC1B-206ENST00000512452 MSGN1A6NI15 193 aa10.9□□□□□ -0.66
DEPDC1B-206ENST00000512452 NKX6-3A6NJ46 265 aa10.9□□□□□ -0.66
DEPDC1B-206ENST00000512452 LEUTXA8MZ59 168 aa10.9□□□□□ -0.66
DEPDC1B-206ENST00000512452 B9A039 149 aa10.9□□□□□ -0.66
DEPDC1B-206ENST00000512452 C19orf84I3L1E1 186 aa10.9□□□□□ -0.66
DEPDC1B-206ENST00000512452 LGALS8O00214 317 aa10.9□□□□□ -0.66
DEPDC1B-206ENST00000512452 GPR137BO60478 399 aa10.9□□□□□ -0.66
DEPDC1B-206ENST00000512452 YPEL1O60688 119 aa10.9□□□□□ -0.66
DEPDC1B-206ENST00000512452 ATG12O94817 140 aa10.9□□□□□ -0.66
DEPDC1B-206ENST00000512452 APOBEC3AP31941 199 aaPredicted RBP10.9□□□□□ -0.66
DEPDC1B-206ENST00000512452 CD80P33681 288 aa10.9□□□□□ -0.66
DEPDC1B-206ENST00000512452 EIF4EBP1Q13541 118 aaPredicted RBP10.9□□□□□ -0.66
DEPDC1B-206ENST00000512452 SNTB1Q13884 538 aaKnown RBP10.9□□□□□ -0.66
DEPDC1B-206ENST00000512452 SPRNQ5BIV9 151 aa10.9□□□□□ -0.66
DEPDC1B-206ENST00000512452 ADAM5Q6NVV9 412 aa10.9□□□□□ -0.66
DEPDC1B-206ENST00000512452 BAP18Q8IXM2 172 aa10.9□□□□□ -0.66
DEPDC1B-206ENST00000512452 DMRTC2Q8IXT2 367 aaPredicted RBP10.9□□□□□ -0.66
DEPDC1B-206ENST00000512452 CORO2AQ92828 525 aa10.9□□□□□ -0.66
DEPDC1B-206ENST00000512452 PLPPR2Q96GM1 343 aa10.9□□□□□ -0.66
DEPDC1B-206ENST00000512452 YPEL2Q96QA6 119 aa10.9□□□□□ -0.66
DEPDC1B-206ENST00000512452 OR2S2Q9NQN1 319 aa10.9□□□□□ -0.66
DEPDC1B-206ENST00000512452 ZC4H2Q9NQZ6 224 aa10.9□□□□□ -0.66
DEPDC1B-206ENST00000512452 GAB2Q9UQC2 676 aa10.9□□□□□ -0.66
DEPDC1B-206ENST00000512452 LSM5Q9Y4Y9 91 aaKnown RBP10.9□□□□□ -0.66
DEPDC1B-206ENST00000512452 IGHV3OR15-7A0A075B7D8 119 aa10.89□□□□□ -0.67
DEPDC1B-206ENST00000512452 E7EQL1 145 aa10.89□□□□□ -0.67
DEPDC1B-206ENST00000512452 SIGLEC5O15389 551 aa10.89□□□□□ -0.67
DEPDC1B-206ENST00000512452 ADAM20O43506 726 aa10.89□□□□□ -0.67
DEPDC1B-206ENST00000512452 PITX3O75364 302 aa10.89□□□□□ -0.67
DEPDC1B-206ENST00000512452 JTBO76095 146 aa10.89□□□□□ -0.67
DEPDC1B-206ENST00000512452 SCGB1D2O95969 90 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms