RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 IFI27L2Q9H2X8 130 aa12.54□□□□□ -0.4
SCLT1-209ENST00000511426 PATZ1Q9HBE1 687 aaKnown RBP12.54□□□□□ -0.4
SCLT1-209ENST00000511426 PSG11Q9UQ72 335 aa12.54□□□□□ -0.4
SCLT1-209ENST00000511426 RELNP78509 3460 aa12.53□□□□□ -0.4
SCLT1-209ENST00000511426 IGHV3-43A0A0B4J1X8 118 aa12.53□□□□□ -0.4
SCLT1-209ENST00000511426 hCG_1809904A0A1W2PP81 198 aa12.53□□□□□ -0.4
SCLT1-209ENST00000511426 A0A1W2PPE2 198 aa12.53□□□□□ -0.4
SCLT1-209ENST00000511426 A0A1W2PR64 198 aa12.53□□□□□ -0.4
SCLT1-209ENST00000511426 A0A1W2PRV1 198 aa12.53□□□□□ -0.4
SCLT1-209ENST00000511426 F5H0A9 414 aaPredicted RBP12.53□□□□□ -0.4
SCLT1-209ENST00000511426 RAB29O14966 203 aa12.53□□□□□ -0.4
SCLT1-209ENST00000511426 RBFOX2O43251 390 aaKnown RBP eCLIP12.53□□□□□ -0.4
SCLT1-209ENST00000511426 FCN3O75636 299 aa12.53□□□□□ -0.4
SCLT1-209ENST00000511426 MPC2O95563 127 aa12.53□□□□□ -0.4
SCLT1-209ENST00000511426 IGHV3-43DP0DP04 118 aa12.53□□□□□ -0.4
SCLT1-209ENST00000511426 COX6B1P14854 86 aa12.53□□□□□ -0.4
SCLT1-209ENST00000511426 KIR2DS2P43631 304 aa12.53□□□□□ -0.4
SCLT1-209ENST00000511426 ZNF345Q14585 488 aa12.53□□□□□ -0.4
SCLT1-209ENST00000511426 SLC25A48Q6ZT89 311 aaKnown RBP12.53□□□□□ -0.4
SCLT1-209ENST00000511426 FAM219AQ8IW50 185 aa12.53□□□□□ -0.4
SCLT1-209ENST00000511426 SELENOHQ8IZQ5 122 aaKnown RBP12.53□□□□□ -0.4
SCLT1-209ENST00000511426 ZNF439Q8NDP4 499 aa12.53□□□□□ -0.4
SCLT1-209ENST00000511426 OR51H1Q8NH63 302 aa12.53□□□□□ -0.4
SCLT1-209ENST00000511426 TNFRSF14Q92956 283 aa12.53□□□□□ -0.4
SCLT1-209ENST00000511426 SEC22AQ96IW7 307 aa12.53□□□□□ -0.4
SCLT1-209ENST00000511426 ADTRPQ96IZ2 230 aa12.53□□□□□ -0.4
SCLT1-209ENST00000511426 BARX1Q9HBU1 254 aaPredicted RBP12.53□□□□□ -0.4
SCLT1-209ENST00000511426 SDHAF2Q9NX18 166 aa12.53□□□□□ -0.4
SCLT1-209ENST00000511426 HSPB11Q9Y547 144 aa12.53□□□□□ -0.4
SCLT1-209ENST00000511426 TRAV14DV4A0A0A6YYC5 116 aa12.52□□□□□ -0.4
SCLT1-209ENST00000511426 TNFSF12O43508 249 aa12.52□□□□□ -0.4
SCLT1-209ENST00000511426 CLDN1O95832 211 aa12.52□□□□□ -0.4
SCLT1-209ENST00000511426 LYL1P12980 280 aa12.52□□□□□ -0.4
SCLT1-209ENST00000511426 CDKN1AP38936 164 aa12.52□□□□□ -0.4
SCLT1-209ENST00000511426 Q5BKY6 102 aa12.52□□□□□ -0.4
SCLT1-209ENST00000511426 WDR25Q64LD2 544 aaPredicted RBP12.52□□□□□ -0.4
SCLT1-209ENST00000511426 LAMTOR1Q6IAA8 161 aa12.52□□□□□ -0.4
SCLT1-209ENST00000511426 FAM71F2Q6NXP2 309 aa12.52□□□□□ -0.4
SCLT1-209ENST00000511426 LYZL2Q7Z4W2 148 aa12.52□□□□□ -0.4
SCLT1-209ENST00000511426 LINC00311Q8N616 119 aa12.52□□□□□ -0.4
SCLT1-209ENST00000511426 ZBTB8BQ8NAP8 495 aaPredicted RBP12.52□□□□□ -0.4
SCLT1-209ENST00000511426 LHFPL5Q8TAF8 219 aa12.52□□□□□ -0.4
SCLT1-209ENST00000511426 ZNF596Q8TC21 504 aa12.52□□□□□ -0.4
SCLT1-209ENST00000511426 OR10C1Q96KK4 312 aa12.52□□□□□ -0.4
SCLT1-209ENST00000511426 SLA2Q9H6Q3 261 aa12.52□□□□□ -0.4
SCLT1-209ENST00000511426 PRR13Q9NZ81 148 aa12.52□□□□□ -0.4
SCLT1-209ENST00000511426 PKDREJQ9NTG1 2253 aa12.52□□□□□ -0.41
SCLT1-209ENST00000511426 ROS1P08922 2347 aa12.51□□□□□ -0.41
SCLT1-209ENST00000511426 C17orf98A8MV24 154 aa12.51□□□□□ -0.41
SCLT1-209ENST00000511426 ST8SIA5O15466 376 aa12.51□□□□□ -0.41
SCLT1-209ENST00000511426 OMGP23515 440 aa12.51□□□□□ -0.41
SCLT1-209ENST00000511426 DLX6P56179 175 aa12.51□□□□□ -0.41
SCLT1-209ENST00000511426 SRSF1Q07955 248 aaKnown RBP eCLIP12.51□□□□□ -0.41
SCLT1-209ENST00000511426 NMSQ5H8A3 153 aa12.51□□□□□ -0.41
SCLT1-209ENST00000511426 THOC7Q6I9Y2 204 aaKnown RBP12.51□□□□□ -0.41
SCLT1-209ENST00000511426 PRSS54Q6PEW0 395 aa12.51□□□□□ -0.41
SCLT1-209ENST00000511426 WDR89Q96FK6 387 aaPredicted RBP12.51□□□□□ -0.41
SCLT1-209ENST00000511426 CCL19Q99731 98 aa12.51□□□□□ -0.41
SCLT1-209ENST00000511426 DOPEY1Q5JWR5 2465 aa12.51□□□□□ -0.41
SCLT1-209ENST00000511426 CFAP46Q8IYW2 2715 aa12.51□□□□□ -0.41
SCLT1-209ENST00000511426 FXYD6-FXYD2A0A087WZ82 144 aa12.51□□□□□ -0.41
SCLT1-209ENST00000511426 A0A1B0GU03 582 aa12.51□□□□□ -0.41
SCLT1-209ENST00000511426 NDUFS8O00217 210 aa12.51□□□□□ -0.41
SCLT1-209ENST00000511426 OR2F2O95006 317 aa12.51□□□□□ -0.41
SCLT1-209ENST00000511426 RLN2P04090 185 aa12.51□□□□□ -0.41
SCLT1-209ENST00000511426 ARHGDIBP52566 201 aa12.51□□□□□ -0.41
SCLT1-209ENST00000511426 TAGLNQ01995 201 aaKnown RBP12.51□□□□□ -0.41
SCLT1-209ENST00000511426 OR2F1Q13607 317 aa12.51□□□□□ -0.41
SCLT1-209ENST00000511426 SMCO1Q147U7 214 aa12.51□□□□□ -0.41
SCLT1-209ENST00000511426 LTC4SQ16873 150 aa12.51□□□□□ -0.41
SCLT1-209ENST00000511426 AVPI1Q5T686 147 aa12.51□□□□□ -0.41
SCLT1-209ENST00000511426 ZNF546Q86UE3 836 aa12.51□□□□□ -0.41
SCLT1-209ENST00000511426 PRELID3BQ9Y3B1 194 aa12.51□□□□□ -0.41
SCLT1-209ENST00000511426 DSCAML1Q8TD84 2053 aa12.5□□□□□ -0.41
SCLT1-209ENST00000511426 A0A0D9SG52 128 aa12.5□□□□□ -0.41
SCLT1-209ENST00000511426 MPTX1A8MV57 137 aa12.5□□□□□ -0.41
SCLT1-209ENST00000511426 L7N2F9 121 aa12.5□□□□□ -0.41
SCLT1-209ENST00000511426 NFYBP25208 207 aa12.5□□□□□ -0.41
SCLT1-209ENST00000511426 DUTP33316 252 aaKnown RBP12.5□□□□□ -0.41
SCLT1-209ENST00000511426 THBS3P49746 956 aa12.5□□□□□ -0.41
SCLT1-209ENST00000511426 GNB2P62879 340 aa12.5□□□□□ -0.41
SCLT1-209ENST00000511426 LGALSLQ3ZCW2 172 aaPredicted RBP12.5□□□□□ -0.41
SCLT1-209ENST00000511426 CT45A1Q5HYN5 189 aa12.5□□□□□ -0.41
SCLT1-209ENST00000511426 PRAMEF5Q5TYX0 476 aa12.5□□□□□ -0.41
SCLT1-209ENST00000511426 FGFRL1Q8N441 504 aa12.5□□□□□ -0.41
SCLT1-209ENST00000511426 LY6G5BQ8NDX9 201 aa12.5□□□□□ -0.41
SCLT1-209ENST00000511426 CT45A3Q8NHU0 189 aa12.5□□□□□ -0.41
SCLT1-209ENST00000511426 TCTEX1D2Q8WW35 142 aa12.5□□□□□ -0.41
SCLT1-209ENST00000511426 RRNAD1Q96FB5 475 aaKnown RBP12.5□□□□□ -0.41
SCLT1-209ENST00000511426 S1PR3Q99500 378 aa12.5□□□□□ -0.41
SCLT1-209ENST00000511426 COA4Q9NYJ1 87 aa12.5□□□□□ -0.41
SCLT1-209ENST00000511426 RNF150Q9ULK6 438 aa12.5□□□□□ -0.41
SCLT1-209ENST00000511426 TNFSF18Q9UNG2 199 aa12.5□□□□□ -0.41
SCLT1-209ENST00000511426 SPTBN1Q01082 2364 aaKnown RBP12.5□□□□□ -0.41
SCLT1-209ENST00000511426 RGS13O14921 159 aa12.49□□□□□ -0.41
SCLT1-209ENST00000511426 LIPFP07098 398 aa12.49□□□□□ -0.41
SCLT1-209ENST00000511426 PAX1P15863 534 aa12.49□□□□□ -0.41
SCLT1-209ENST00000511426 CCL3L1P16619 93 aa12.49□□□□□ -0.41
SCLT1-209ENST00000511426 PDLIM4P50479 330 aa12.49□□□□□ -0.41
SCLT1-209ENST00000511426 ZNF134P52741 427 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms