RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 TPRX1Q8N7U7 411 aa3.97□□□□□ -1.77
PDLIM5-214ENST00000510099 LYPD6BQ8NI32 183 aa3.97□□□□□ -1.77
PDLIM5-214ENST00000510099 RNASE11Q8TAA1 199 aaKnown RBP3.97□□□□□ -1.77
PDLIM5-214ENST00000510099 PPP1R35Q8TAP8 253 aa3.97□□□□□ -1.77
PDLIM5-214ENST00000510099 SUN5Q8TC36 379 aa3.97□□□□□ -1.77
PDLIM5-214ENST00000510099 NINJ1Q92982 152 aa3.97□□□□□ -1.77
PDLIM5-214ENST00000510099 SNRNP40Q96DI7 357 aaKnown RBP3.97□□□□□ -1.77
PDLIM5-214ENST00000510099 C14orf79Q96F83 325 aa3.97□□□□□ -1.77
PDLIM5-214ENST00000510099 SDSLQ96GA7 329 aa3.97□□□□□ -1.77
PDLIM5-214ENST00000510099 SNX22Q96L94 193 aa3.97□□□□□ -1.77
PDLIM5-214ENST00000510099 RAB40CQ96S21 281 aa3.97□□□□□ -1.77
PDLIM5-214ENST00000510099 TSNAXQ99598 290 aaKnown RBP3.97□□□□□ -1.77
PDLIM5-214ENST00000510099 ATP5SQ99766 215 aa3.97□□□□□ -1.77
PDLIM5-214ENST00000510099 SLC25A31Q9H0C2 315 aa3.97□□□□□ -1.77
PDLIM5-214ENST00000510099 MAGT1Q9H0U3 335 aa3.97□□□□□ -1.77
PDLIM5-214ENST00000510099 PLEKHF2Q9H8W4 249 aa3.97□□□□□ -1.77
PDLIM5-214ENST00000510099 COA4Q9NYJ1 87 aa3.97□□□□□ -1.77
PDLIM5-214ENST00000510099 CACNG5Q9UF02 275 aa3.97□□□□□ -1.77
PDLIM5-214ENST00000510099 IL19Q9UHD0 177 aa3.97□□□□□ -1.77
PDLIM5-214ENST00000510099 DUSP13Q9UII6 198 aa3.97□□□□□ -1.77
PDLIM5-214ENST00000510099 JPT1Q9UK76 154 aa3.97□□□□□ -1.77
PDLIM5-214ENST00000510099 PPP1R3CQ9UQK1 317 aa3.97□□□□□ -1.77
PDLIM5-214ENST00000510099 CARHSP1Q9Y2V2 147 aaKnown RBP3.97□□□□□ -1.77
PDLIM5-214ENST00000510099 STRAPQ9Y3F4 350 aaKnown RBP3.97□□□□□ -1.77
PDLIM5-214ENST00000510099 RBM7Q9Y580 266 aaKnown RBP3.97□□□□□ -1.77
PDLIM5-214ENST00000510099 RP1L1Q8IWN7 2480 aaPredicted RBP3.97□□□□□ -1.77
PDLIM5-214ENST00000510099 SPTA1P02549 2419 aa3.96□□□□□ -1.77
PDLIM5-214ENST00000510099 TLN1Q9Y490 2541 aaKnown RBP3.96□□□□□ -1.77
PDLIM5-214ENST00000510099 ASPMQ8IZT6 3477 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 IGHV3OR15-7A0A075B7D8 119 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 TMEM218A2RU14 115 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 DPRXA6NFQ7 191 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 FAM157AC9JC47 383 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 TRIM77I1YAP6 450 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 TOR1AO14656 332 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 ABCD4O14678 606 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 ITGB1BP1O14713 200 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 TXNL1O43396 289 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 FBXO24O75426 580 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 S1PR2O95136 353 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 FAM87AP0C7U9 286 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 CGB3P0DN86 165 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 CGB7P0DN87 165 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 SELLP14151 372 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 MUC1P15941 1255 aaPredicted RBP3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 TNFSF4P23510 183 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 SULT1A1P50225 295 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 TAS2R30P59541 319 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 RPL23AP62750 156 aaKnown RBP3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 RPL30P62888 115 aaKnown RBP3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 TNFAIP6P98066 277 aaPredicted RBP3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 NHLH2Q02577 135 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 RBPJQ06330 500 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 BSPH1Q075Z2 132 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 EDDM3AQ14507 147 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 CLINT1Q14677 625 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 ADIPOQQ15848 244 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 IZUMO4Q1ZYL8 232 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 SWI5Q1ZZU3 235 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 TMEM30BQ3MIR4 351 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 Q3ZCU0 254 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 MIDNQ504T8 468 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 C4orf17Q53FE4 359 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 C10orf91Q5T1B1 145 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 TEX36Q5VZQ5 186 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 FAM53AQ6NSI3 398 aaPredicted RBP3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 CLEC9AQ6UXN8 241 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 STX12Q86Y82 276 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 WFDC8Q8IUA0 241 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 SPAG16Q8N0X2 631 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 ZNF808Q8N4W9 903 aaPredicted RBP3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 ZNF561Q8N587 486 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 COMMD1Q8N668 190 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 HSD17B11Q8NBQ5 300 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 OR5C1Q8NGR4 320 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 TCTEX1D2Q8WW35 142 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 NARS2Q96I59 477 aaKnown RBP3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 GAFA1Q96PS6 74 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 DIRC2Q96SL1 478 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 HSD17B10Q99714 261 aaKnown RBP3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 VKORC1Q9BQB6 163 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 AGMATQ9BSE5 352 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 DCTN5Q9BTE1 182 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 MS4A7Q9GZW8 240 aaPredicted RBP3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 SH3BGRL3Q9H299 93 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 IFI27L2Q9H2X8 130 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 HRH4Q9H3N8 390 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 ESRP2Q9H6T0 727 aaKnown RBP3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 GCM1Q9NP62 436 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 RAB9BQ9NP90 201 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 CALYQ9NYX4 217 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 OR6C3Q9NZP0 311 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 RNF7Q9UBF6 113 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 SH3BGRL2Q9UJC5 107 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 PSG11Q9UQ72 335 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 MMP24Q9Y5R2 645 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 WSB1Q9Y6I7 421 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 CADP27708 2225 aa3.96□□□□□ -1.78
PDLIM5-214ENST00000510099 GTF3C1Q12789 2109 aa3.95□□□□□ -1.78
PDLIM5-214ENST00000510099 ESPL1Q14674 2120 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms