RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 WDR61Q9GZS3 305 aaKnown RBP1.9□□□□□ -2.1
CAST-226ENST00000509529 S1PR5Q9H228 398 aa1.9□□□□□ -2.1
CAST-226ENST00000509529 SCRT2Q9NQ03 307 aa1.9□□□□□ -2.1
CAST-226ENST00000509529 MRPL16Q9NX20 251 aaKnown RBP1.9□□□□□ -2.1
CAST-226ENST00000509529 MRPL15Q9P015 296 aaKnown RBP1.9□□□□□ -2.1
CAST-226ENST00000509529 AK3Q9UIJ7 227 aa1.9□□□□□ -2.1
CAST-226ENST00000509529 SLC13A4Q9UKG4 626 aa1.9□□□□□ -2.1
CAST-226ENST00000509529 ERG28Q9UKR5 140 aa1.9□□□□□ -2.1
CAST-226ENST00000509529 HS3ST2Q9Y278 367 aa1.9□□□□□ -2.1
CAST-226ENST00000509529 Q9Y3F1 56 aa1.9□□□□□ -2.1
CAST-226ENST00000509529 OR1A2Q9Y585 309 aa1.9□□□□□ -2.1
CAST-226ENST00000509529 SOX21Q9Y651 276 aaPredicted RBP1.9□□□□□ -2.1
CAST-226ENST00000509529 A0A0G2JMM0 328 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 A0A1W2PPB8 328 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 LINC01546A6NGU7 62 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 A6NIN4 97 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 ZNF705GA8MUZ8 300 aaPredicted RBP1.9□□□□□ -2.11
CAST-226ENST00000509529 KIR3DP1A8MWS1 328 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 FNDC10F2Z333 226 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 F8W1H4 67 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 SLC25A17O43808 307 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 NKX2-2O95096 273 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 IL33O95760 270 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 PNMTP11086 282 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 LAMP2P13473 410 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 HRH1P35367 487 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 SOAT1P35610 550 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 ZNF93P35789 620 aaPredicted RBP1.9□□□□□ -2.11
CAST-226ENST00000509529 RBMXP38159 391 aaKnown RBP1.9□□□□□ -2.11
CAST-226ENST00000509529 RGRP47804 291 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 FASLGP48023 281 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 TCL1AP56279 114 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 PPP1CBP62140 327 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 RPL23AP62750 156 aaKnown RBP1.9□□□□□ -2.11
CAST-226ENST00000509529 RPL24P83731 157 aaKnown RBP1.9□□□□□ -2.11
CAST-226ENST00000509529 MEF2BQ02080 365 aaPredicted RBP1.9□□□□□ -2.11
CAST-226ENST00000509529 EGR4Q05215 589 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 CPEB4Q17RY0 729 aaKnown RBP eCLIP1.9□□□□□ -2.11
CAST-226ENST00000509529 TDRG1Q3Y452 100 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 LDLRAD2Q5SZI1 272 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 ZNF776Q68DI1 518 aaPredicted RBP1.9□□□□□ -2.11
CAST-226ENST00000509529 CCDC144NLQ6NUI1 221 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 INO80CQ6PI98 192 aaPredicted RBP1.9□□□□□ -2.11
CAST-226ENST00000509529 PARS2Q7L3T8 475 aaKnown RBP1.9□□□□□ -2.11
CAST-226ENST00000509529 ATP5L2Q7Z4Y8 100 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 C5orf17Q8NAS9 161 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 GLMPQ8WWB7 406 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 NINJ1Q92982 152 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 CHCHD1Q96BP2 118 aaKnown RBP1.9□□□□□ -2.11
CAST-226ENST00000509529 SEC22AQ96IW7 307 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 ADTRPQ96IZ2 230 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 OR2D2Q9H210 308 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 MMP25Q9NPA2 562 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 G6PC2Q9NQR9 355 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 TNFRSF19Q9NS68 423 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 SERTAD4Q9NUC0 356 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 EHFQ9NZC4 300 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 IL36BQ9NZH7 164 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 CD84Q9UIB8 345 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 ABT1Q9ULW3 272 aaKnown RBP1.9□□□□□ -2.11
CAST-226ENST00000509529 BOKQ9UMX3 212 aaPredicted RBP1.9□□□□□ -2.11
CAST-226ENST00000509529 VDAC3Q9Y277 283 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 RBM7Q9Y580 266 aaKnown RBP1.9□□□□□ -2.11
CAST-226ENST00000509529 MRPL42Q9Y6G3 142 aaKnown RBP1.9□□□□□ -2.11
CAST-226ENST00000509529 CASP8AP2Q9UKL3 1982 aa1.9□□□□□ -2.11
CAST-226ENST00000509529 IGLV1-36A0A0B4J1U3 117 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 CENPVL3A0A0U1RRI6 287 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 CTXND1A0A1B0GTU2 59 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 A0A1B0GWB2 263 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 MEIS3P1A6NDR6 274 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 ANKUB1A6NFN9 424 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 AQP7P3A6NL99 342 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 SLC38A8A6NNN8 435 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 ANKRD30BLA7E2S9 258 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 EEF1E1-BLOC1S5C9J1V9 151 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 G3V3Y1 287 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 J3QR89 54 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 M0QYG6 137 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 BMPR1BO00238 502 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 SMAD7O15105 426 aaKnown RBP1.89□□□□□ -2.11
CAST-226ENST00000509529 SLC31A1O15431 190 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 NDUFS4O43181 175 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 ZNF324O75467 553 aaPredicted RBP1.89□□□□□ -2.11
CAST-226ENST00000509529 MT-ATP6P00846 226 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 HIST1H1CP16403 213 aaKnown RBP1.89□□□□□ -2.11
CAST-226ENST00000509529 SPINT3P49223 89 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 PIGPP57054 158 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 IGLV3-21P80748 117 aaPredicted RBP1.89□□□□□ -2.11
CAST-226ENST00000509529 SLAQ13239 276 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 MMDQ15546 238 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 ADIPOQQ15848 244 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 ZNF726P1Q15940 193 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 ODF4Q2M2E3 257 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 GAGE13Q4V321 117 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 WDR38Q5JTN6 314 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 OR4C11Q6IEV9 310 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 FOXL2NBQ6ZUU3 175 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 FAM231DQ6ZW35 169 aa1.89□□□□□ -2.11
CAST-226ENST00000509529 YRDCQ86U90 279 aaKnown RBP1.89□□□□□ -2.11
CAST-226ENST00000509529 SBSPONQ8IVN8 264 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms