RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 CA11O75493 328 aa12.21□□□□□ -0.45
CXCL1-202ENST00000509101 RGS11O94810 467 aa12.21□□□□□ -0.45
CXCL1-202ENST00000509101 TRGV3P03979 118 aa12.21□□□□□ -0.45
CXCL1-202ENST00000509101 LIMS3P0CW19 117 aa12.21□□□□□ -0.45
CXCL1-202ENST00000509101 LIMS4P0CW20 117 aa12.21□□□□□ -0.45
CXCL1-202ENST00000509101 IGFBP3P17936 291 aaPredicted RBP12.21□□□□□ -0.45
CXCL1-202ENST00000509101 HTD2P86397 168 aa12.21□□□□□ -0.45
CXCL1-202ENST00000509101 RPL22L1Q6P5R6 122 aaKnown RBP12.21□□□□□ -0.45
CXCL1-202ENST00000509101 GLDNQ6ZMI3 551 aaPredicted RBP12.21□□□□□ -0.45
CXCL1-202ENST00000509101 GTSCR1Q86UQ5 136 aa12.21□□□□□ -0.45
CXCL1-202ENST00000509101 JAGN1Q8N5M9 183 aa12.21□□□□□ -0.45
CXCL1-202ENST00000509101 LFNGQ8NES3 379 aa12.21□□□□□ -0.45
CXCL1-202ENST00000509101 MRPL30Q8TCC3 161 aaKnown RBP12.21□□□□□ -0.45
CXCL1-202ENST00000509101 RDH12Q96NR8 316 aa12.21□□□□□ -0.45
CXCL1-202ENST00000509101 YPEL2Q96QA6 119 aa12.21□□□□□ -0.45
CXCL1-202ENST00000509101 SELENOIQ9C0D9 397 aa12.21□□□□□ -0.45
CXCL1-202ENST00000509101 SLA2Q9H6Q3 261 aa12.21□□□□□ -0.45
CXCL1-202ENST00000509101 ST8SIA5O15466 376 aa12.2□□□□□ -0.46
CXCL1-202ENST00000509101 SNRPBP14678 240 aaKnown RBP12.2□□□□□ -0.46
CXCL1-202ENST00000509101 ZP3P21754 424 aa12.2□□□□□ -0.46
CXCL1-202ENST00000509101 CD40LGP29965 261 aa12.2□□□□□ -0.46
CXCL1-202ENST00000509101 SMN1Q16637 294 aaKnown RBP12.2□□□□□ -0.46
CXCL1-202ENST00000509101 AKIRIN2Q53H80 203 aa12.2□□□□□ -0.46
CXCL1-202ENST00000509101 RPL39P5Q59GN2 51 aa12.2□□□□□ -0.46
CXCL1-202ENST00000509101 AWAT2Q6E213 333 aa12.2□□□□□ -0.46
CXCL1-202ENST00000509101 RANGRFQ9HD47 186 aaPredicted RBP12.2□□□□□ -0.46
CXCL1-202ENST00000509101 TRAV8-7A0A075B6U6 113 aa12.19□□□□□ -0.46
CXCL1-202ENST00000509101 ANKRD34BA5PLL1 514 aa12.19□□□□□ -0.46
CXCL1-202ENST00000509101 OR5H14A6NHG9 310 aa12.19□□□□□ -0.46
CXCL1-202ENST00000509101 FAM90A7PA6NKC0 464 aa12.19□□□□□ -0.46
CXCL1-202ENST00000509101 FAM90A23PA8MXZ1 464 aa12.19□□□□□ -0.46
CXCL1-202ENST00000509101 H0Y980 276 aa12.19□□□□□ -0.46
CXCL1-202ENST00000509101 CASQ2O14958 399 aaPredicted RBP12.19□□□□□ -0.46
CXCL1-202ENST00000509101 WBP4O75554 376 aaKnown RBP12.19□□□□□ -0.46
CXCL1-202ENST00000509101 CRTAPO75718 401 aaPredicted RBP12.19□□□□□ -0.46
CXCL1-202ENST00000509101 CA2P00918 260 aa12.19□□□□□ -0.46
CXCL1-202ENST00000509101 TFAP2AP05549 437 aa12.19□□□□□ -0.46
CXCL1-202ENST00000509101 GSTP1P09211 210 aaKnown RBP12.19□□□□□ -0.46
CXCL1-202ENST00000509101 MGMTP16455 207 aa12.19□□□□□ -0.46
CXCL1-202ENST00000509101 FUT3P21217 361 aa12.19□□□□□ -0.46
CXCL1-202ENST00000509101 CCDC58Q4VC31 144 aa12.19□□□□□ -0.46
CXCL1-202ENST00000509101 OGFRL1Q5TC84 451 aaPredicted RBP12.19□□□□□ -0.46
CXCL1-202ENST00000509101 DMKNQ6E0U4 476 aaPredicted RBP12.19□□□□□ -0.46
CXCL1-202ENST00000509101 SIGIRRQ6IA17 410 aa12.19□□□□□ -0.46
CXCL1-202ENST00000509101 FAM71F2Q6NXP2 309 aa12.19□□□□□ -0.46
CXCL1-202ENST00000509101 ZNF554Q86TJ5 538 aa12.19□□□□□ -0.46
CXCL1-202ENST00000509101 ZNF555Q8NEP9 628 aa12.19□□□□□ -0.46
CXCL1-202ENST00000509101 OR9G4Q8NGQ1 327 aa12.19□□□□□ -0.46
CXCL1-202ENST00000509101 IL17DQ8TAD2 202 aa12.19□□□□□ -0.46
CXCL1-202ENST00000509101 Q96M66 194 aa12.19□□□□□ -0.46
CXCL1-202ENST00000509101 Q96MT0 163 aa12.19□□□□□ -0.46
CXCL1-202ENST00000509101 THAP7Q9BT49 309 aaPredicted RBP12.19□□□□□ -0.46
CXCL1-202ENST00000509101 ZNF355PQ9NSJ1 428 aa12.19□□□□□ -0.46
CXCL1-202ENST00000509101 METTL1Q9UBP6 276 aaKnown RBP12.19□□□□□ -0.46
CXCL1-202ENST00000509101 CKLFQ9UBR5 152 aa12.19□□□□□ -0.46
CXCL1-202ENST00000509101 C13orf42A0A1B0GVH6 325 aa12.18□□□□□ -0.46
CXCL1-202ENST00000509101 H0YJW9 148 aa12.18□□□□□ -0.46
CXCL1-202ENST00000509101 H7C2Y5 167 aa12.18□□□□□ -0.46
CXCL1-202ENST00000509101 PDCD6O75340 191 aa12.18□□□□□ -0.46
CXCL1-202ENST00000509101 CT45A6P0DMU7 189 aa12.18□□□□□ -0.46
CXCL1-202ENST00000509101 CT45A5P0DMU8 189 aa12.18□□□□□ -0.46
CXCL1-202ENST00000509101 CT45A7P0DMV0 189 aa12.18□□□□□ -0.46
CXCL1-202ENST00000509101 SYNJ2BPP57105 145 aa12.18□□□□□ -0.46
CXCL1-202ENST00000509101 LY6G6FQ5SQ64 297 aa12.18□□□□□ -0.46
CXCL1-202ENST00000509101 OR2G6Q5TZ20 316 aa12.18□□□□□ -0.46
CXCL1-202ENST00000509101 PACRGLQ8N7B6 248 aa12.18□□□□□ -0.46
CXCL1-202ENST00000509101 GRPEL2Q8TAA5 225 aa12.18□□□□□ -0.46
CXCL1-202ENST00000509101 CYGBQ8WWM9 190 aa12.18□□□□□ -0.46
CXCL1-202ENST00000509101 IL1F10Q8WWZ1 152 aa12.18□□□□□ -0.46
CXCL1-202ENST00000509101 GALMQ96C23 342 aa12.18□□□□□ -0.46
CXCL1-202ENST00000509101 SMIM19Q96E16 107 aa12.18□□□□□ -0.46
CXCL1-202ENST00000509101 HIPK2Q9H2X6 1198 aa12.18□□□□□ -0.46
CXCL1-202ENST00000509101 PIPOXQ9P0Z9 390 aa12.18□□□□□ -0.46
CXCL1-202ENST00000509101 CEPT1Q9Y6K0 416 aa12.18□□□□□ -0.46
CXCL1-202ENST00000509101 TRBV5-5A0A0J9YX44 114 aa12.17□□□□□ -0.46
CXCL1-202ENST00000509101 IZUMO1RA6ND01 250 aa12.17□□□□□ -0.46
CXCL1-202ENST00000509101 GLAP06280 429 aa12.17□□□□□ -0.46
CXCL1-202ENST00000509101 FSTP19883 344 aa12.17□□□□□ -0.46
CXCL1-202ENST00000509101 ETV1P50549 477 aa12.17□□□□□ -0.46
CXCL1-202ENST00000509101 DEFA5Q01523 94 aa12.17□□□□□ -0.46
CXCL1-202ENST00000509101 KLF5Q13887 457 aaPredicted RBP12.17□□□□□ -0.46
CXCL1-202ENST00000509101 HMGN3Q15651 99 aa12.17□□□□□ -0.46
CXCL1-202ENST00000509101 C6orf141Q5SZD1 244 aa12.17□□□□□ -0.46
CXCL1-202ENST00000509101 LCN12Q6JVE5 192 aa12.17□□□□□ -0.46
CXCL1-202ENST00000509101 IL34Q6ZMJ4 242 aa12.17□□□□□ -0.46
CXCL1-202ENST00000509101 POC5Q8NA72 575 aa12.17□□□□□ -0.46
CXCL1-202ENST00000509101 FAM46BQ96A09 425 aa12.17□□□□□ -0.46
CXCL1-202ENST00000509101 PLEKHA3Q9HB20 300 aa12.17□□□□□ -0.46
CXCL1-202ENST00000509101 MRPS18AQ9NVS2 196 aaKnown RBP12.17□□□□□ -0.46
CXCL1-202ENST00000509101 STEAP1Q9UHE8 339 aa12.17□□□□□ -0.46
CXCL1-202ENST00000509101 ADAM30Q9UKF2 790 aa12.17□□□□□ -0.46
CXCL1-202ENST00000509101 WASHC3Q9Y3C0 194 aa12.17□□□□□ -0.46
CXCL1-202ENST00000509101 RPL36Q9Y3U8 105 aaKnown RBP12.17□□□□□ -0.46
CXCL1-202ENST00000509101 RAB29O14966 203 aa12.16□□□□□ -0.46
CXCL1-202ENST00000509101 GPX5O75715 221 aa12.16□□□□□ -0.46
CXCL1-202ENST00000509101 RBBP9O75884 186 aa12.16□□□□□ -0.46
CXCL1-202ENST00000509101 PSG5Q15238 335 aa12.16□□□□□ -0.46
CXCL1-202ENST00000509101 Q499Y3 187 aa12.16□□□□□ -0.46
CXCL1-202ENST00000509101 ZNF562Q6V9R5 426 aa12.16□□□□□ -0.46
CXCL1-202ENST00000509101 TMPRSS11AQ6ZMR5 421 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms