RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 PDZD9Q8IXQ8 264 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 LINC01561Q8N1V8 128 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 C15orf54Q8N8G6 183 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 SMRP1Q8NCR6 262 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 NFAM1Q8NET5 270 aaPredicted RBP3.3□□□□□ -1.88
NEDD4-209ENST00000508871 GPR32P1Q8NGA4 272 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 CLEC7AQ9BXN2 247 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 HOXD1Q9GZZ0 328 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 PRO3102Q9H379 93 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 BOKQ9UMX3 212 aaPredicted RBP3.3□□□□□ -1.88
NEDD4-209ENST00000508871 DNAJC15Q9Y5T4 150 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 K7ERS5 55 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 M0R1B8 84 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 HSD17B6O14756 317 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 BCL2L11O43521 198 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 H2AFB1P0C5Y9 115 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 SELEP16581 610 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 HTR1EP28566 365 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 POLR2JP52435 117 aaKnown RBP3.3□□□□□ -1.88
NEDD4-209ENST00000508871 PPP1CAP62136 330 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 C1orf61Q13536 156 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 IAH1Q2TAA2 248 aaPredicted RBP3.3□□□□□ -1.88
NEDD4-209ENST00000508871 AMMECR1LQ6DCA0 310 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 LCN8Q6JVE9 175 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 SLC22A18ASQ8N1D0 253 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 NUP37Q8NFH4 326 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 APOBEC3DQ96AK3 386 aaPredicted RBP3.3□□□□□ -1.88
NEDD4-209ENST00000508871 PPDPFQ9H3Y8 114 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 Q9HAA7 133 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 IL36RNQ9UBH0 155 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 RNF114Q9Y508 228 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 MTCH2Q9Y6C9 303 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 C1orf105O95561 183 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 NAPSAO96009 420 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 SOD1P00441 154 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 CERS1P27544 350 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 GABRA2P47869 451 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 TMEM241Q24JQ0 296 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 Q6ZVH6 145 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 SLC16A13Q7RTY0 426 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 OR2M7Q8NG81 312 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 OR2T27Q8NH04 317 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 RHOXF1Q8NHV9 184 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 FAM168AQ92567 244 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 HS3ST3B1Q9Y662 390 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 GGT3PA6NGU5 568 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 J3QRK9 145 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 MPZL1O95297 269 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 PIRTP0C851 137 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 NFYBP25208 207 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 NBL1P41271 181 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 KIR2DS2P43631 304 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 GRB2P62993 217 aaKnown RBP3.3□□□□□ -1.88
NEDD4-209ENST00000508871 PMAIP1Q13794 54 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 OR8B8Q15620 311 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 ZNF630Q2M218 657 aaPredicted RBP3.3□□□□□ -1.88
NEDD4-209ENST00000508871 LINC00596Q86U02 117 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 OR2L13Q8N349 312 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 SVOPLQ8N434 492 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 OR5R1Q8NH85 324 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 LRRC61Q9BV99 259 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 PLA2G2FQ9BZM2 168 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 TCRBV3S1A0A5B6 114 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 TRAPPC13A5PLN9 417 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 EPOPA6NHQ4 379 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 D6RAR5 112 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 M0R1X1 148 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 CREBL2O60519 120 aaPredicted RBP3.3□□□□□ -1.88
NEDD4-209ENST00000508871 CTSVO60911 334 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 DAD1P61803 113 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 LYG2Q86SG7 212 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 OR4C3Q8NH37 302 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 CMBLQ96DG6 245 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 RCHY1Q96PM5 261 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 EXOSC3Q9NQT5 275 aaKnown RBP3.3□□□□□ -1.88
NEDD4-209ENST00000508871 KLHDC2Q9Y2U9 406 aa3.3□□□□□ -1.88
NEDD4-209ENST00000508871 A0A0G2JK05 382 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 LINC00587B1AMM8 73 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 DLEU1O43261 78 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 CLDN1O95832 211 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 HLA-DRB1P01911 266 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 CSN1S1P47710 185 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 PFN3P60673 137 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 SPCS2Q15005 226 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 GLT8D1Q68CQ7 371 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 OR1P1Q8NH06 330 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 OR10J5Q8NHC4 309 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 OR5P2Q8WZ92 322 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 OR5P3Q8WZ94 311 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 TMEM131Q92545 1883 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 AJUBAQ96IF1 538 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 C2orf48Q96LS8 159 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 CIB3Q96Q77 187 aaPredicted RBP3.29□□□□□ -1.88
NEDD4-209ENST00000508871 OR2H1Q9GZK4 316 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 LRTM1Q9HBL6 345 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 SLC22A11Q9NSA0 550 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 ZNF586Q9NXT0 402 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 MSRB1Q9NZV6 116 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 DOCK6Q96HP0 2047 aa3.29□□□□□ -1.88
NEDD4-209ENST00000508871 DHRS12A0PJE2 317 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms