RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 RNF150Q9ULK6 438 aa11.53□□□□□ -0.56
RNF4-208ENST00000507247 FLNAP21333 2647 aaKnown RBP11.53□□□□□ -0.56
RNF4-208ENST00000507247 CENPXA8MT69 81 aa11.52□□□□□ -0.57
RNF4-208ENST00000507247 TOR1AO14656 332 aa11.52□□□□□ -0.57
RNF4-208ENST00000507247 FSHBP01225 129 aa11.52□□□□□ -0.57
RNF4-208ENST00000507247 FOSL1P15407 271 aa11.52□□□□□ -0.57
RNF4-208ENST00000507247 POC5Q8NA72 575 aa11.52□□□□□ -0.57
RNF4-208ENST00000507247 TERB2Q8NHR7 220 aa11.52□□□□□ -0.57
RNF4-208ENST00000507247 TOMM40LQ969M1 308 aa11.52□□□□□ -0.57
RNF4-208ENST00000507247 OR2D2Q9H210 308 aa11.52□□□□□ -0.57
RNF4-208ENST00000507247 YAE1D1Q9NRH1 226 aa11.52□□□□□ -0.57
RNF4-208ENST00000507247 CCL28Q9NRJ3 127 aa11.52□□□□□ -0.57
RNF4-208ENST00000507247 SCP2D1Q9UJQ7 156 aa11.52□□□□□ -0.57
RNF4-208ENST00000507247 RBM7Q9Y580 266 aaKnown RBP11.52□□□□□ -0.57
RNF4-208ENST00000507247 IGHV1-69DA0A0B4J2H0 117 aa11.51□□□□□ -0.57
RNF4-208ENST00000507247 PROP1O75360 226 aa11.51□□□□□ -0.57
RNF4-208ENST00000507247 IGLV2-14P01704 120 aa11.51□□□□□ -0.57
RNF4-208ENST00000507247 IGHV1-69P01742 117 aa11.51□□□□□ -0.57
RNF4-208ENST00000507247 SLC6A1P30531 599 aa11.51□□□□□ -0.57
RNF4-208ENST00000507247 RAB7AP51149 207 aa11.51□□□□□ -0.57
RNF4-208ENST00000507247 PRRX1P54821 245 aa11.51□□□□□ -0.57
RNF4-208ENST00000507247 DEFA1P59665 94 aa11.51□□□□□ -0.57
RNF4-208ENST00000507247 DEFA3P59666 94 aa11.51□□□□□ -0.57
RNF4-208ENST00000507247 BAMBIQ13145 260 aa11.51□□□□□ -0.57
RNF4-208ENST00000507247 DIAPH2-AS1Q14236 149 aa11.51□□□□□ -0.57
RNF4-208ENST00000507247 BRD3OSQ6XYD6 125 aa11.51□□□□□ -0.57
RNF4-208ENST00000507247 LHFPL4Q7Z7J7 247 aa11.51□□□□□ -0.57
RNF4-208ENST00000507247 LYG1Q8N1E2 194 aa11.51□□□□□ -0.57
RNF4-208ENST00000507247 PIP4P2Q8N4L2 257 aa11.51□□□□□ -0.57
RNF4-208ENST00000507247 OR10X1Q8NGY0 326 aa11.51□□□□□ -0.57
RNF4-208ENST00000507247 MARCH1Q8TCQ1 289 aa11.51□□□□□ -0.57
RNF4-208ENST00000507247 C17orf50Q8WW18 174 aa11.51□□□□□ -0.57
RNF4-208ENST00000507247 SLC5A7Q9GZV3 580 aa11.51□□□□□ -0.57
RNF4-208ENST00000507247 VSIG4Q9Y279 399 aa11.51□□□□□ -0.57
RNF4-208ENST00000507247 SAA2-SAA4A0A096LPE2 208 aa11.5□□□□□ -0.57
RNF4-208ENST00000507247 A8MV72 311 aaPredicted RBP11.5□□□□□ -0.57
RNF4-208ENST00000507247 BUB1B-PAK6H3BSN5 160 aa11.5□□□□□ -0.57
RNF4-208ENST00000507247 HSD17B6O14756 317 aa11.5□□□□□ -0.57
RNF4-208ENST00000507247 NPFFO15130 113 aa11.5□□□□□ -0.57
RNF4-208ENST00000507247 SAA2P0DJI9 122 aaPredicted RBP11.5□□□□□ -0.57
RNF4-208ENST00000507247 GNRHRP30968 328 aa11.5□□□□□ -0.57
RNF4-208ENST00000507247 UCP3P55916 312 aa11.5□□□□□ -0.57
RNF4-208ENST00000507247 PLA1AQ53H76 456 aa11.5□□□□□ -0.57
RNF4-208ENST00000507247 RPL39P5Q59GN2 51 aa11.5□□□□□ -0.57
RNF4-208ENST00000507247 GPR157Q5UAW9 335 aa11.5□□□□□ -0.57
RNF4-208ENST00000507247 MZT2BQ6NZ67 158 aa11.5□□□□□ -0.57
RNF4-208ENST00000507247 ZNF818PQ6ZRF7 136 aa11.5□□□□□ -0.57
RNF4-208ENST00000507247 IL17RELQ6ZVW7 336 aa11.5□□□□□ -0.57
RNF4-208ENST00000507247 ZNF645Q8N7E2 425 aa11.5□□□□□ -0.57
RNF4-208ENST00000507247 FAM216AQ8WUB2 273 aa11.5□□□□□ -0.57
RNF4-208ENST00000507247 ST6GALNAC6Q969X2 333 aa11.5□□□□□ -0.57
RNF4-208ENST00000507247 AJUBAQ96IF1 538 aa11.5□□□□□ -0.57
RNF4-208ENST00000507247 ZNF251Q9BRH9 671 aa11.5□□□□□ -0.57
RNF4-208ENST00000507247 GSX1Q9H4S2 264 aaPredicted RBP11.5□□□□□ -0.57
RNF4-208ENST00000507247 OCEL1Q9H607 264 aa11.5□□□□□ -0.57
RNF4-208ENST00000507247 SDHAF2Q9NX18 166 aa11.5□□□□□ -0.57
RNF4-208ENST00000507247 CSPG4Q6UVK1 2322 aa11.49□□□□□ -0.57
RNF4-208ENST00000507247 MAP1AP78559 2803 aaPredicted RBP11.49□□□□□ -0.57
RNF4-208ENST00000507247 LY6LH3BQJ8 138 aa11.49□□□□□ -0.57
RNF4-208ENST00000507247 NDUFB6O95139 128 aa11.49□□□□□ -0.57
RNF4-208ENST00000507247 PGAM2P15259 253 aa11.49□□□□□ -0.57
RNF4-208ENST00000507247 PI3P19957 117 aa11.49□□□□□ -0.57
RNF4-208ENST00000507247 PAX6P26367 422 aa11.49□□□□□ -0.57
RNF4-208ENST00000507247 HTR1DP28221 377 aa11.49□□□□□ -0.57
RNF4-208ENST00000507247 SAA4P35542 130 aa11.49□□□□□ -0.57
RNF4-208ENST00000507247 GPR12P47775 334 aa11.49□□□□□ -0.57
RNF4-208ENST00000507247 ZNF137PP52743 207 aa11.49□□□□□ -0.57
RNF4-208ENST00000507247 RBMS2Q15434 407 aaKnown RBP11.49□□□□□ -0.57
RNF4-208ENST00000507247 FAM120AOSQ5T036 256 aa11.49□□□□□ -0.57
RNF4-208ENST00000507247 NRARPQ7Z6K4 114 aa11.49□□□□□ -0.57
RNF4-208ENST00000507247 DYNAPQ8N1N2 210 aa11.49□□□□□ -0.57
RNF4-208ENST00000507247 DRAM1Q8N682 238 aa11.49□□□□□ -0.57
RNF4-208ENST00000507247 ZFAND2BQ8WV99 257 aa11.49□□□□□ -0.57
RNF4-208ENST00000507247 RSRP1Q9BUV0 290 aa11.49□□□□□ -0.57
RNF4-208ENST00000507247 DPAGT1Q9H3H5 408 aa11.49□□□□□ -0.57
RNF4-208ENST00000507247 PIPOXQ9P0Z9 390 aa11.49□□□□□ -0.57
RNF4-208ENST00000507247 ZNF221Q9UK13 617 aa11.49□□□□□ -0.57
RNF4-208ENST00000507247 GPR132Q9UNW8 380 aa11.49□□□□□ -0.57
RNF4-208ENST00000507247 AMMECR1Q9Y4X0 333 aaPredicted RBP11.49□□□□□ -0.57
RNF4-208ENST00000507247 SOX21Q9Y651 276 aaPredicted RBP11.49□□□□□ -0.57
RNF4-208ENST00000507247 ACANP16112 2415 aa11.49□□□□□ -0.57
RNF4-208ENST00000507247 ZFHX3Q15911 3703 aa11.49□□□□□ -0.57
RNF4-208ENST00000507247 C2CD3Q4AC94 2353 aa11.48□□□□□ -0.57
RNF4-208ENST00000507247 FAM240BA0A1B0GVZ2 78 aa11.48□□□□□ -0.57
RNF4-208ENST00000507247 RAB29O14966 203 aa11.48□□□□□ -0.57
RNF4-208ENST00000507247 SPNP16150 400 aa11.48□□□□□ -0.57
RNF4-208ENST00000507247 REG1BP48304 166 aa11.48□□□□□ -0.57
RNF4-208ENST00000507247 LGALS4P56470 323 aa11.48□□□□□ -0.57
RNF4-208ENST00000507247 EIF4EBP1Q13541 118 aaPredicted RBP11.48□□□□□ -0.57
RNF4-208ENST00000507247 SURF2Q15527 256 aaPredicted RBP11.48□□□□□ -0.57
RNF4-208ENST00000507247 MIDNQ504T8 468 aa11.48□□□□□ -0.57
RNF4-208ENST00000507247 MINOS1Q5TGZ0 78 aa11.48□□□□□ -0.57
RNF4-208ENST00000507247 CLEC9AQ6UXN8 241 aa11.48□□□□□ -0.57
RNF4-208ENST00000507247 ZNF833PQ6ZTB9 187 aa11.48□□□□□ -0.57
RNF4-208ENST00000507247 SLC38A6Q8IZM9 456 aa11.48□□□□□ -0.57
RNF4-208ENST00000507247 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.48□□□□□ -0.57
RNF4-208ENST00000507247 NANPQ8TBE9 248 aa11.48□□□□□ -0.57
RNF4-208ENST00000507247 GPHA2Q96T91 129 aa11.48□□□□□ -0.57
RNF4-208ENST00000507247 C5orf66Q9H5L9 145 aa11.48□□□□□ -0.57
RNF4-208ENST00000507247 DPM3Q9P2X0 92 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms