RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 IGFBP3P17936 291 aaPredicted RBP1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 ATF1P18846 271 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 ELK1P19419 428 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 TBPP20226 339 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 CCNOP22674 350 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 CRYGSP22914 178 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 IL32P24001 234 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 PRSS3P35030 304 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 TGFBR1P36897 503 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 RPS27P42677 84 aaKnown RBP1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 PTGFRP43088 359 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 KIR3DL2P43630 455 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 CBX5P45973 191 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 CAMLGP49069 296 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 RBP2P50120 134 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 ATP1B3P54709 279 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 RIPPLY3P57055 190 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 RAB25P57735 213 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 MRPS15P82914 257 aaKnown RBP1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 PSG4Q00888 419 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 KLRB1Q12918 225 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 ASAH1Q13510 395 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 INSL4Q14641 139 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 OXA1LQ15070 435 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 RSU1Q15404 277 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 KISS1Q15726 138 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 CARTPTQ16568 116 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 PABPC1L2AQ5JQF8 200 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 TIMM23BQ5SRD1 257 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 PHYHD1Q5SRE7 291 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 CLVS2Q5SYC1 327 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 FAM27D1Q5T7N8 215 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 C1orf185Q5T7R7 199 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 HES5Q5TA89 166 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 ZNF57Q68EA5 555 aaPredicted RBP1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 Q6ZSR3 168 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 MRPL21Q7Z2W9 205 aaKnown RBP1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 ANGPTL5Q86XS5 388 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 ZNF573Q86YE8 665 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 SKA3Q8IX90 412 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 MKXQ8IYA7 352 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 SAXO1Q8IYX7 474 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 ZNF101Q8IZC7 436 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 RDH10Q8IZV5 341 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 GABRG1Q8N1C3 465 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 CENPSQ8N2Z9 138 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 CNEP1R1Q8N9A8 125 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 SPERTQ8NA61 448 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 ZSCAN4Q8NAM6 433 aaPredicted RBP1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 SLC30A7Q8NEW0 376 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 OR4M2Q8NGB6 313 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 OR8B12Q8NGG6 310 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 OR5A2Q8NGI9 324 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 OR51A4Q8NGJ6 313 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 OR51A2Q8NGJ7 313 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 SYNPRQ8TBG9 265 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 FAM57AQ8TBR7 257 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 ENKURQ8TC29 256 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 OR51E1Q8TCB6 317 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 RGP1Q92546 391 aaPredicted RBP1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 FAM3DQ96BQ1 224 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 SGK3Q96BR1 496 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 HAVCR1Q96D42 359 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 C14orf79Q96F83 325 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 BORCS8Q96FH0 119 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 REEP6Q96HR9 211 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 SCGB3A2Q96PL1 93 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 AMELYQ99218 206 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 TTTY10Q9BZA0 68 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 BCL2L14Q9BZR8 327 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 CHST5Q9GZS9 411 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 SRRQ9GZT4 340 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 SPACA1Q9HBV2 294 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 GPR84Q9NQS5 396 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 RBFOX1Q9NWB1 397 aaKnown RBP1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 RHBDL2Q9NX52 303 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 SPRR3Q9UBC9 169 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 CLCF1Q9UBD9 225 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 GLS2Q9UI32 602 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 PIGLQ9Y2B2 252 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 MRPS7Q9Y2R9 242 aaKnown RBP1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 N6AMT1Q9Y5N5 214 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 V9GYH0 126 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 V9GYS6 101 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 SCN3AQ9NY46 2000 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 MDC1Q14676 2089 aaKnown RBP1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 CFAP54Q96N23 3096 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 BRWD1Q9NSI6 2320 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 RIF1Q5UIP0 2472 aaKnown RBP1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 TRAV8-7A0A075B6U6 113 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 FUOMA2VDF0 154 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 OR5H1A6NKK0 313 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 LRRC30A6NM36 301 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 DISC1C4P0D8 188 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 H7C417 338 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 EEF1E1O43324 174 aaKnown RBP1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 LYRM1O43325 122 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 AKR7A2O43488 359 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 GMDSO60547 372 aa1.81□□□□□ -2.12
TOPBP1-205ENST00000506779 CA11O75493 328 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms