RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 TMEM56-RWDD3S4R434 201 aa4.84□□□□□ -1.63
SCLT1-207ENST00000506233 MAP1AP78559 2803 aaPredicted RBP4.84□□□□□ -1.63
SCLT1-207ENST00000506233 AHCTF1Q8WYP5 2266 aa4.84□□□□□ -1.63
SCLT1-207ENST00000506233 USP24Q9UPU5 2620 aa4.84□□□□□ -1.63
SCLT1-207ENST00000506233 A0A0B4J2A0 478 aa4.84□□□□□ -1.63
SCLT1-207ENST00000506233 SERPINE3A8MV23 424 aa4.84□□□□□ -1.63
SCLT1-207ENST00000506233 SEC61GP60059 68 aa4.84□□□□□ -1.63
SCLT1-207ENST00000506233 EFNB3Q15768 340 aa4.84□□□□□ -1.63
SCLT1-207ENST00000506233 HAGHLQ6PII5 290 aaPredicted RBP4.84□□□□□ -1.63
SCLT1-207ENST00000506233 SSX7Q7RTT5 188 aa4.84□□□□□ -1.63
SCLT1-207ENST00000506233 DOLPP1Q86YN1 238 aa4.84□□□□□ -1.63
SCLT1-207ENST00000506233 TNFAIP8L1Q8WVP5 186 aa4.84□□□□□ -1.63
SCLT1-207ENST00000506233 SSMEM1Q8WWF3 244 aa4.84□□□□□ -1.63
SCLT1-207ENST00000506233 MRPL24Q96A35 216 aaKnown RBP4.84□□□□□ -1.63
SCLT1-207ENST00000506233 LINC00574Q9H8X3 128 aa4.84□□□□□ -1.63
SCLT1-207ENST00000506233 RASL12Q9NYN1 266 aa4.84□□□□□ -1.63
SCLT1-207ENST00000506233 SHPKQ9UHJ6 478 aa4.84□□□□□ -1.63
SCLT1-207ENST00000506233 IGKV1-5P01602 117 aa4.84□□□□□ -1.64
SCLT1-207ENST00000506233 HOXD4P09016 255 aaPredicted RBP4.84□□□□□ -1.64
SCLT1-207ENST00000506233 ZNF20P17024 532 aa4.84□□□□□ -1.64
SCLT1-207ENST00000506233 BLVRBP30043 206 aaPredicted RBP4.84□□□□□ -1.64
SCLT1-207ENST00000506233 TALDO1P37837 337 aa4.84□□□□□ -1.64
SCLT1-207ENST00000506233 BEAN1Q3B7T3 259 aa4.84□□□□□ -1.64
SCLT1-207ENST00000506233 MIDNQ504T8 468 aa4.84□□□□□ -1.64
SCLT1-207ENST00000506233 ABHD17BQ5VST6 288 aa4.84□□□□□ -1.64
SCLT1-207ENST00000506233 RUSC1-AS1Q66K80 236 aa4.84□□□□□ -1.64
SCLT1-207ENST00000506233 ZNF841Q6ZN19 808 aa4.84□□□□□ -1.64
SCLT1-207ENST00000506233 IL17RELQ6ZVW7 336 aa4.84□□□□□ -1.64
SCLT1-207ENST00000506233 H1FOOQ8IZA3 346 aaPredicted RBP4.84□□□□□ -1.64
SCLT1-207ENST00000506233 OSR2Q8N2R0 312 aa4.84□□□□□ -1.64
SCLT1-207ENST00000506233 SUMF2Q8NBJ7 301 aa4.84□□□□□ -1.64
SCLT1-207ENST00000506233 LINC00052Q96N35 136 aa4.84□□□□□ -1.64
SCLT1-207ENST00000506233 AQP10Q96PS8 301 aa4.84□□□□□ -1.64
SCLT1-207ENST00000506233 Q9H8V8 135 aa4.84□□□□□ -1.64
SCLT1-207ENST00000506233 TAS2R8Q9NYW2 309 aa4.84□□□□□ -1.64
SCLT1-207ENST00000506233 TEX13DA0A0J9YY54 714 aaPredicted RBP4.83□□□□□ -1.64
SCLT1-207ENST00000506233 CENPXA8MT69 81 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 MRPL33O75394 65 aaKnown RBP4.83□□□□□ -1.64
SCLT1-207ENST00000506233 UBBP0CG47 229 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 TBPP20226 339 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 AADACP22760 399 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 NFYAP23511 347 aaPredicted RBP4.83□□□□□ -1.64
SCLT1-207ENST00000506233 FAM27E3Q08E93 113 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 OPCMLQ14982 345 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 TMEM128Q5BJH2 165 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 C6orf183Q5T699 404 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 DPPA2Q7Z7J5 298 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 LHFPL4Q7Z7J7 247 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 ARRDC1Q8N5I2 433 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 SLC30A7Q8NEW0 376 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 OR5A2Q8NGI9 324 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 SEC22AQ96IW7 307 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 MED28Q9H204 178 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 HIPK2Q9H2X6 1198 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 SPACA1Q9HBV2 294 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 ST3GAL6Q9Y274 331 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 H7C1Q1 480 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 NDUFS8O00217 210 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 NUP62P37198 522 aaPredicted RBP4.83□□□□□ -1.64
SCLT1-207ENST00000506233 RBP2P50120 134 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 RPL30P62888 115 aaKnown RBP4.83□□□□□ -1.64
SCLT1-207ENST00000506233 ARL16Q0P5N6 197 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 ZNF826PQ6ZT77 177 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 ZNF561Q8N587 486 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 CCDC54Q8NEL0 328 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 DDB2Q92466 427 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 IP6K3Q96PC2 410 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 NARFLQ9H6Q4 476 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 RANBP3Q9H6Z4 567 aaPredicted RBP4.83□□□□□ -1.64
SCLT1-207ENST00000506233 GEMIN7Q9H840 131 aaKnown RBP4.83□□□□□ -1.64
SCLT1-207ENST00000506233 RNF24Q9Y225 148 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 APCP25054 2843 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 TRAV39A0A0B4J263 110 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 K7ENP7 123 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 DEDDO75618 318 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 DHFRP00374 187 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 CRYGCP07315 174 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 UCP1P25874 307 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 OR3A3P47888 321 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 ACTBP60709 375 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 ACTG1P63261 375 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 SCRN3Q0VDG4 424 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 AANATQ16613 207 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 PHLDA2Q53GA4 152 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 ASPHD1Q5U4P2 390 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 OR2T2Q6IF00 324 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 SLC25A26Q70HW3 274 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 LYZL2Q7Z4W2 148 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 FTMTQ8N4E7 242 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 ZNF439Q8NDP4 499 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 SLC25A40Q8TBP6 338 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 PIK3IP1Q96FE7 263 aa4.83□□□□□ -1.64
SCLT1-207ENST00000506233 MRPL48Q96GC5 212 aaKnown RBP4.83□□□□□ -1.64
SCLT1-207ENST00000506233 EP300Q09472 2414 aaPredicted RBP4.82□□□□□ -1.64
SCLT1-207ENST00000506233 KLRC4-KLRK1H3BQV0 150 aa4.82□□□□□ -1.64
SCLT1-207ENST00000506233 XRCC2O43543 280 aa4.82□□□□□ -1.64
SCLT1-207ENST00000506233 CREBL2O60519 120 aaPredicted RBP4.82□□□□□ -1.64
SCLT1-207ENST00000506233 PDCD6O75340 191 aa4.82□□□□□ -1.64
SCLT1-207ENST00000506233 CDS2O95674 445 aa4.82□□□□□ -1.64
SCLT1-207ENST00000506233 CTSDP07339 412 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms