RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 OGFRL1Q5TC84 451 aaPredicted RBP2.36□□□□□ -2.03
TCOF1-208ENST00000506063 DDI2Q5TDH0 399 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 ZNF691Q5VV52 312 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 OR52W1Q6IF63 320 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 IZUMO2Q6UXV1 221 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 UTS2BQ765I0 119 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 GDPD3Q7L5L3 318 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 SLC16A13Q7RTY0 426 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 TRAPPC6BQ86SZ2 158 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 UBE2DNLQ8IWF7 75 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 BATF2Q8N1L9 274 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 NKAIN3Q8N8D7 197 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 DNAAF1Q8NEP3 725 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 OR5A2Q8NGI9 324 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 OR52I1Q8NGK6 324 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 OR5D18Q8NGL1 313 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 OR2G2Q8NGZ5 317 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 OR2T10Q8NGZ9 312 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 OR52N1Q8NH53 320 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 OR9G1Q8NH87 305 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 OR5AK2Q8NH90 309 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 CNIH3Q8TBE1 160 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 GPR148Q8TDV2 347 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 CORO2AQ92828 525 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 UFD1Q92890 307 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 LEAP2Q969E1 77 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 SLAMF9Q96A28 289 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 RITA1Q96K30 269 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 RASL11BQ9BPW5 248 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 JAM3Q9BX67 310 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 PARP12Q9H0J9 701 aaKnown RBP2.36□□□□□ -2.03
TCOF1-208ENST00000506063 PPIL3Q9H2H8 161 aaKnown RBP2.36□□□□□ -2.03
TCOF1-208ENST00000506063 GAL3ST2Q9H3Q3 398 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 ZCCHC4Q9H5U6 513 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 EXOSC4Q9NPD3 245 aaKnown RBP2.36□□□□□ -2.03
TCOF1-208ENST00000506063 PARP11Q9NR21 331 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 FAM118AQ9NWS6 357 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 PAK1IP1Q9NWT1 392 aaPredicted RBP2.36□□□□□ -2.03
TCOF1-208ENST00000506063 ERVK13-1Q9NX77 482 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 PGPEP1Q9NXJ5 209 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 SCN3BQ9NY72 215 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 CNOT2Q9NZN8 540 aaKnown RBP2.36□□□□□ -2.03
TCOF1-208ENST00000506063 FAM30AQ9NZY2 134 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 DIMT1Q9UNQ2 313 aaKnown RBP2.36□□□□□ -2.03
TCOF1-208ENST00000506063 ERGIC3Q9Y282 383 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 V9GYS6 101 aa2.36□□□□□ -2.03
TCOF1-208ENST00000506063 TRGV10A0A0A0MS01 117 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 A0A0B4J203 849 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 IGHV4-28A0A0C4DH34 117 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 PNMA8CA0A1B0GUJ8 204 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 PQLC2LA1A4F0 135 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 ANKRD34BA5PLL1 514 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 A6NIN4 97 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 C2orf70A6NJV1 201 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 PRR32B1ATL7 298 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 ANKRD65E5RJM6 399 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 TOR1AO14656 332 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 HSD17B6O14756 317 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 MAGEB4O15481 346 aaPredicted RBP2.35□□□□□ -2.03
TCOF1-208ENST00000506063 ZNF780AO75290 641 aaPredicted RBP2.35□□□□□ -2.03
TCOF1-208ENST00000506063 SRSF10O75494 262 aaKnown RBP2.35□□□□□ -2.03
TCOF1-208ENST00000506063 KDM4BO94953 1096 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 HAND1O96004 215 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 MOSP00540 346 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 IGLV3-1P01715 115 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 IGHV3-7P01780 117 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 CSTBP04080 98 aaKnown RBP2.35□□□□□ -2.03
TCOF1-208ENST00000506063 ISG15P05161 165 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 FOLR2P14207 255 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 RPL35AP18077 110 aaKnown RBP2.35□□□□□ -2.03
TCOF1-208ENST00000506063 GABRB1P18505 474 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 ATF1P18846 271 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 MPZP25189 248 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 PSMA1P25786 263 aaKnown RBP2.35□□□□□ -2.03
TCOF1-208ENST00000506063 CD1BP29016 333 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 ERP29P30040 261 aaKnown RBP2.35□□□□□ -2.03
TCOF1-208ENST00000506063 PTGFRP43088 359 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 GLP1RP43220 463 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 OR3A1P47881 315 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 REG1BP48304 166 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 SOX2P48431 317 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 KCNJ3P48549 501 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 HNRNPA3P51991 378 aaKnown RBP2.35□□□□□ -2.03
TCOF1-208ENST00000506063 PRRX1P54821 245 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 SNU13P55769 128 aaKnown RBP2.35□□□□□ -2.03
TCOF1-208ENST00000506063 WNT4P56705 351 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 FAM3BP58499 235 aaPredicted RBP2.35□□□□□ -2.03
TCOF1-208ENST00000506063 TPPP2P59282 170 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 MADCAM1Q13477 382 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 RSU1Q15404 277 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 MED22Q15528 200 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 GRK1Q15835 563 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 ECSCRQ19T08 205 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 Q499Y3 187 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 PAN3Q58A45 887 aaKnown RBP2.35□□□□□ -2.03
TCOF1-208ENST00000506063 YIF1BQ5BJH7 314 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 RBM48Q5RL73 367 aaKnown RBP2.35□□□□□ -2.03
TCOF1-208ENST00000506063 TMEM42Q69YG0 159 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 AWAT2Q6E213 333 aa2.35□□□□□ -2.03
TCOF1-208ENST00000506063 ZNF343Q6P1L6 599 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms