RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 FGFRL1Q8N441 504 aa10.04□□□□□ -0.8
UBE3D-206ENST00000505226 RNASEH2CQ8TDP1 164 aaKnown RBP10.04□□□□□ -0.8
UBE3D-206ENST00000505226 RNF150Q9ULK6 438 aa10.04□□□□□ -0.8
UBE3D-206ENST00000505226 USF3Q68DE3 2245 aa10.03□□□□□ -0.8
UBE3D-206ENST00000505226 DSPP15924 2871 aaKnown RBP10.03□□□□□ -0.8
UBE3D-206ENST00000505226 IGKV3D-15A0A087WSY6 115 aa10.03□□□□□ -0.8
UBE3D-206ENST00000505226 XKRY2A2RUG3 117 aa10.03□□□□□ -0.8
UBE3D-206ENST00000505226 MKRN2OSH3BPM6 223 aa10.03□□□□□ -0.8
UBE3D-206ENST00000505226 DVL1O14640 695 aa10.03□□□□□ -0.8
UBE3D-206ENST00000505226 TGOLN2O43493 480 aa10.03□□□□□ -0.8
UBE3D-206ENST00000505226 CA6P23280 308 aa10.03□□□□□ -0.8
UBE3D-206ENST00000505226 S100GP29377 79 aa10.03□□□□□ -0.8
UBE3D-206ENST00000505226 DRAM1Q8N682 238 aa10.03□□□□□ -0.8
UBE3D-206ENST00000505226 PARLQ9H300 379 aa10.03□□□□□ -0.8
UBE3D-206ENST00000505226 TMEM9BQ9NQ34 198 aa10.03□□□□□ -0.8
UBE3D-206ENST00000505226 KCNS2Q9ULS6 477 aa10.03□□□□□ -0.8
UBE3D-206ENST00000505226 DNAJC13O75165 2243 aa10.03□□□□□ -0.8
UBE3D-206ENST00000505226 SIRPB1O00241 398 aa10.03□□□□□ -0.8
UBE3D-206ENST00000505226 DEGS1O15121 323 aa10.03□□□□□ -0.8
UBE3D-206ENST00000505226 NPPCP23582 126 aa10.03□□□□□ -0.8
UBE3D-206ENST00000505226 GALR1P47211 349 aa10.03□□□□□ -0.8
UBE3D-206ENST00000505226 SSTP61278 116 aa10.03□□□□□ -0.8
UBE3D-206ENST00000505226 GNB2P62879 340 aa10.03□□□□□ -0.8
UBE3D-206ENST00000505226 HOXA4Q00056 320 aaPredicted RBP10.03□□□□□ -0.8
UBE3D-206ENST00000505226 SPATA46Q5T0L3 261 aa10.03□□□□□ -0.8
UBE3D-206ENST00000505226 TMEM14EPQ6UXP3 125 aa10.03□□□□□ -0.8
UBE3D-206ENST00000505226 WDR86Q86TI4 376 aa10.03□□□□□ -0.8
UBE3D-206ENST00000505226 C5orf30Q96GV9 206 aa10.03□□□□□ -0.8
UBE3D-206ENST00000505226 HES7Q9BYE0 225 aa10.03□□□□□ -0.8
UBE3D-206ENST00000505226 OR51I2Q9H344 312 aa10.03□□□□□ -0.8
UBE3D-206ENST00000505226 NPIPB11E5RHQ5 1161 aa10.02□□□□□ -0.8
UBE3D-206ENST00000505226 LHX2P50458 406 aa10.02□□□□□ -0.8
UBE3D-206ENST00000505226 ZNF66Q6ZN08 573 aa10.02□□□□□ -0.8
UBE3D-206ENST00000505226 UBE2ZQ9H832 354 aaPredicted RBP10.02□□□□□ -0.8
UBE3D-206ENST00000505226 SPENQ96T58 3664 aaKnown RBP10.02□□□□□ -0.8
UBE3D-206ENST00000505226 NTN3O00634 580 aaPredicted RBP10.02□□□□□ -0.81
UBE3D-206ENST00000505226 NUBP1P53384 320 aa10.02□□□□□ -0.81
UBE3D-206ENST00000505226 PMS2P11Q13670 270 aa10.02□□□□□ -0.81
UBE3D-206ENST00000505226 COA6Q5JTJ3 125 aaKnown RBP10.02□□□□□ -0.81
UBE3D-206ENST00000505226 VASH2Q86V25 355 aa10.02□□□□□ -0.81
UBE3D-206ENST00000505226 TMEM37Q8WXS4 190 aa10.02□□□□□ -0.81
UBE3D-206ENST00000505226 PINX1Q96BK5 328 aaKnown RBP10.02□□□□□ -0.81
UBE3D-206ENST00000505226 LINC00470Q9BZP3 86 aa10.02□□□□□ -0.81
UBE3D-206ENST00000505226 ACTR3CQ9C0K3 210 aaPredicted RBP10.02□□□□□ -0.81
UBE3D-206ENST00000505226 STRADBQ9C0K7 418 aa10.02□□□□□ -0.81
UBE3D-206ENST00000505226 CLN8Q9UBY8 286 aa10.02□□□□□ -0.81
UBE3D-206ENST00000505226 ASPMQ8IZT6 3477 aa10.02□□□□□ -0.81
UBE3D-206ENST00000505226 A0A1W2PPQ1 181 aa10.02□□□□□ -0.81
UBE3D-206ENST00000505226 PATE3B3GLJ2 98 aa10.02□□□□□ -0.81
UBE3D-206ENST00000505226 CLDN1O95832 211 aa10.02□□□□□ -0.81
UBE3D-206ENST00000505226 IFNA10P01566 189 aa10.02□□□□□ -0.81
UBE3D-206ENST00000505226 CEACAM6P40199 344 aa10.02□□□□□ -0.81
UBE3D-206ENST00000505226 TAS2R60P59551 318 aa10.02□□□□□ -0.81
UBE3D-206ENST00000505226 SSX2Q16385 188 aa10.02□□□□□ -0.81
UBE3D-206ENST00000505226 ZNF497Q6ZNH5 498 aa10.02□□□□□ -0.81
UBE3D-206ENST00000505226 LINC00596Q86U02 117 aa10.02□□□□□ -0.81
UBE3D-206ENST00000505226 WFIKKN1Q96NZ8 548 aa10.02□□□□□ -0.81
UBE3D-206ENST00000505226 PARD6GQ9BYG4 376 aaPredicted RBP10.02□□□□□ -0.81
UBE3D-206ENST00000505226 RBM7Q9Y580 266 aaKnown RBP10.02□□□□□ -0.81
UBE3D-206ENST00000505226 PMS2P5A8MQ11 134 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 OR2H2O95918 312 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 CLDN18P56856 261 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 BRWD1-AS2P59051 145 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 RPL30P62888 115 aaKnown RBP10.01□□□□□ -0.81
UBE3D-206ENST00000505226 GNG3P63215 75 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 TNFRSF9Q07011 255 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 TFF3Q07654 80 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 ZNF573Q86YE8 665 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 PILRBQ9UKJ0 227 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 FUT9Q9Y231 359 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 LOC400499M0QZD8 3231 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 C1QTNF9BB2RNN3 333 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 H7BYZ3 331 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 SELEP16581 610 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 G6PCP35575 357 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 LINC00205P59089 165 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 OR4F5Q8NH21 305 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 OR4F4Q96R69 305 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 AURKAIP1Q9NWT8 199 aaPredicted RBP10.01□□□□□ -0.81
UBE3D-206ENST00000505226 ZNF705GA8MUZ8 300 aaPredicted RBP10.01□□□□□ -0.81
UBE3D-206ENST00000505226 KRASP01116 189 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 IFNA1P01562 189 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 COX5BP10606 129 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 CYB561P49447 251 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 PDLIM4P50479 330 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 C3AR1Q16581 482 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 TCEAL6Q6IPX3 200 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 OR1L1Q8NH94 360 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 ZDHHC16Q969W1 377 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 TRAPPC2LQ9UL33 140 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 MRPS18CQ9Y3D5 142 aaKnown RBP10.01□□□□□ -0.81
UBE3D-206ENST00000505226 CACNA1DQ01668 2161 aa10.01□□□□□ -0.81
UBE3D-206ENST00000505226 ANKRD30BLA7E2S9 258 aa10□□□□□ -0.81
UBE3D-206ENST00000505226 PPP5D1E7EU14 171 aa10□□□□□ -0.81
UBE3D-206ENST00000505226 ST8SIA5O15466 376 aa10□□□□□ -0.81
UBE3D-206ENST00000505226 OR4A8P0C604 315 aa10□□□□□ -0.81
UBE3D-206ENST00000505226 EGR1P18146 543 aa10□□□□□ -0.81
UBE3D-206ENST00000505226 FGF7P21781 194 aa10□□□□□ -0.81
UBE3D-206ENST00000505226 ZXDAP98168 799 aa10□□□□□ -0.81
UBE3D-206ENST00000505226 PMP22Q01453 160 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms