RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 OR3A3P47888 321 aa8.11□□□□□ -1.11
NUP54-203ENST00000504173 RAB7AP51149 207 aa8.11□□□□□ -1.11
NUP54-203ENST00000504173 ZNF134P52741 427 aa8.11□□□□□ -1.11
NUP54-203ENST00000504173 CDK10Q15131 360 aa8.11□□□□□ -1.11
NUP54-203ENST00000504173 SSX2Q16385 188 aa8.11□□□□□ -1.11
NUP54-203ENST00000504173 PLA1AQ53H76 456 aa8.11□□□□□ -1.11
NUP54-203ENST00000504173 LDLRAD2Q5SZI1 272 aa8.11□□□□□ -1.11
NUP54-203ENST00000504173 H1FOOQ8IZA3 346 aaPredicted RBP8.11□□□□□ -1.11
NUP54-203ENST00000504173 LYG1Q8N1E2 194 aa8.11□□□□□ -1.11
NUP54-203ENST00000504173 OR5AP2Q8NGF4 316 aa8.11□□□□□ -1.11
NUP54-203ENST00000504173 ZNF418Q8TF45 676 aaPredicted RBP8.11□□□□□ -1.11
NUP54-203ENST00000504173 C17orf50Q8WW18 174 aa8.11□□□□□ -1.11
NUP54-203ENST00000504173 TOMM40LQ969M1 308 aa8.11□□□□□ -1.11
NUP54-203ENST00000504173 RPEQ96AT9 228 aa8.11□□□□□ -1.11
NUP54-203ENST00000504173 MALSU1Q96EH3 234 aa8.11□□□□□ -1.11
NUP54-203ENST00000504173 ZNF48Q96MX3 618 aaPredicted RBP8.11□□□□□ -1.11
NUP54-203ENST00000504173 TOLLIPQ9H0E2 274 aa8.11□□□□□ -1.11
NUP54-203ENST00000504173 EHFQ9NZC4 300 aa8.11□□□□□ -1.11
NUP54-203ENST00000504173 KLK11Q9UBX7 282 aa8.11□□□□□ -1.11
NUP54-203ENST00000504173 RBM7Q9Y580 266 aaKnown RBP8.11□□□□□ -1.11
NUP54-203ENST00000504173 TENM3Q9P273 2699 aa8.1□□□□□ -1.11
NUP54-203ENST00000504173 CMYA5Q8N3K9 4069 aa8.1□□□□□ -1.11
NUP54-203ENST00000504173 ZNF736B4DX44 427 aaPredicted RBP8.1□□□□□ -1.11
NUP54-203ENST00000504173 ITGB1BP1O14713 200 aa8.1□□□□□ -1.11
NUP54-203ENST00000504173 GSTZ1O43708 216 aaPredicted RBP8.1□□□□□ -1.11
NUP54-203ENST00000504173 PMP2P02689 132 aa8.1□□□□□ -1.11
NUP54-203ENST00000504173 OR5H8P0DN80 308 aa8.1□□□□□ -1.11
NUP54-203ENST00000504173 NFYAP23511 347 aaPredicted RBP8.1□□□□□ -1.11
NUP54-203ENST00000504173 PAX6P26367 422 aa8.1□□□□□ -1.11
NUP54-203ENST00000504173 FCGR2CP31995 323 aa8.1□□□□□ -1.11
NUP54-203ENST00000504173 HRH1P35367 487 aa8.1□□□□□ -1.11
NUP54-203ENST00000504173 ARHGDIBP52566 201 aa8.1□□□□□ -1.11
NUP54-203ENST00000504173 SSBP1Q04837 148 aaKnown RBP8.1□□□□□ -1.11
NUP54-203ENST00000504173 ZNF79Q15937 498 aa8.1□□□□□ -1.11
NUP54-203ENST00000504173 ACTBL2Q562R1 376 aa8.1□□□□□ -1.11
NUP54-203ENST00000504173 TPTE2P1Q5T6R2 138 aa8.1□□□□□ -1.11
NUP54-203ENST00000504173 SHISA2Q6UWI4 295 aa8.1□□□□□ -1.11
NUP54-203ENST00000504173 AJUBAQ96IF1 538 aa8.1□□□□□ -1.11
NUP54-203ENST00000504173 C11orf54Q9H0W9 315 aaPredicted RBP8.1□□□□□ -1.11
NUP54-203ENST00000504173 IFI27L2Q9H2X8 130 aa8.1□□□□□ -1.11
NUP54-203ENST00000504173 ABCB10Q9NRK6 738 aa8.1□□□□□ -1.11
NUP54-203ENST00000504173 EPPK1P58107 5090 aaKnown RBP8.09□□□□□ -1.11
NUP54-203ENST00000504173 OOSP1A8MZH6 123 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 LY6LH3BQJ8 138 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 J3QRK9 145 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 HSD17B6O14756 317 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 VENTXO95231 258 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 CSF1P09603 554 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 OR8U9P0C7N5 309 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 GPR12P47775 334 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 REG1BP48304 166 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 RFX2P48378 723 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 TAS2R19P59542 299 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 ZNF45Q02386 682 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 BAMBIQ13145 260 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 DIAPH2-AS1Q14236 149 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 LRRC75BQ2VPJ9 315 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 RNASE10Q5GAN6 216 aaKnown RBP8.09□□□□□ -1.11
NUP54-203ENST00000504173 CCDC144NLQ6NUI1 221 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 LINC00299Q6ZSB3 139 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 OVCH2Q7RTZ1 564 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 LDLRAD3Q86YD5 345 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 LYSMD2Q8IV50 215 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 DYNAPQ8N1N2 210 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 Q8N402 240 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 TMEM229BQ8NBD8 167 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 OR8U1Q8NH10 309 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 FAM216AQ8WUB2 273 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 ABHD14BQ96IU4 210 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 THAP7Q9BT49 309 aaPredicted RBP8.09□□□□□ -1.11
NUP54-203ENST00000504173 ZNF747Q9BV97 191 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 SRRQ9GZT4 340 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 OR2D2Q9H210 308 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 TAS2R8Q9NYW2 309 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 PIPOXQ9P0Z9 390 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 ZNF107Q9UII5 783 aaPredicted RBP8.09□□□□□ -1.11
NUP54-203ENST00000504173 ZNF221Q9UK13 617 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 RNF150Q9ULK6 438 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 RBMX2Q9Y388 322 aaKnown RBP8.09□□□□□ -1.11
NUP54-203ENST00000504173 OR2W1Q9Y3N9 320 aa8.09□□□□□ -1.11
NUP54-203ENST00000504173 SAA2-SAA4A0A096LPE2 208 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 BTBD17A6NE02 478 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 M0QYG6 137 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 RAB29O14966 203 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 LANCL1O43813 399 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 TUSC2O75896 110 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 CD3DP04234 171 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 GAPDHP04406 335 aaKnown RBP8.08□□□□□ -1.12
NUP54-203ENST00000504173 IFNA6P05013 189 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 SAA2P0DJI9 122 aaPredicted RBP8.08□□□□□ -1.12
NUP54-203ENST00000504173 TBPP20226 339 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 AADACP22760 399 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 LUMP51884 338 aaPredicted RBP8.08□□□□□ -1.12
NUP54-203ENST00000504173 ZNF137PP52743 207 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 HERV-K104P61576 105 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 TSPAN5P62079 268 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 ZNF816Q0VGE8 651 aaPredicted RBP8.08□□□□□ -1.12
NUP54-203ENST00000504173 DYRK1AQ13627 763 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 TUSC1Q2TAM9 212 aa8.08□□□□□ -1.12
NUP54-203ENST00000504173 VAX1Q5SQQ9 334 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms