RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 IGHG4P01861 327 aa9.37□□□□□ -0.91
MED28-203ENST00000503945 GSTP1P09211 210 aaKnown RBP9.37□□□□□ -0.91
MED28-203ENST00000503945 VEGFCP49767 419 aa9.37□□□□□ -0.91
MED28-203ENST00000503945 RPS25P62851 125 aaKnown RBP9.37□□□□□ -0.91
MED28-203ENST00000503945 EGFEM1PQ0D2K5 195 aa9.37□□□□□ -0.91
MED28-203ENST00000503945 ZNF880Q6PDB4 577 aa9.37□□□□□ -0.91
MED28-203ENST00000503945 ETV3LQ6ZN32 361 aa9.37□□□□□ -0.91
MED28-203ENST00000503945 MOB1BQ7L9L4 216 aa9.37□□□□□ -0.91
MED28-203ENST00000503945 SVOPQ8N4V2 548 aa9.37□□□□□ -0.91
MED28-203ENST00000503945 RNF152Q8N8N0 203 aa9.37□□□□□ -0.91
MED28-203ENST00000503945 RBMXL1Q96E39 390 aaKnown RBP9.37□□□□□ -0.91
MED28-203ENST00000503945 RAX2Q96IS3 184 aa9.37□□□□□ -0.91
MED28-203ENST00000503945 CYYR1Q96J86 154 aa9.37□□□□□ -0.91
MED28-203ENST00000503945 DUX3Q96PT4 197 aa9.37□□□□□ -0.91
MED28-203ENST00000503945 MRPL20Q9BYC9 149 aaKnown RBP9.37□□□□□ -0.91
MED28-203ENST00000503945 LPAR5Q9H1C0 372 aa9.37□□□□□ -0.91
MED28-203ENST00000503945 OR51J1Q9H342 316 aa9.37□□□□□ -0.91
MED28-203ENST00000503945 AK3Q9UIJ7 227 aa9.37□□□□□ -0.91
MED28-203ENST00000503945 ZNF580Q9UK33 172 aa9.37□□□□□ -0.91
MED28-203ENST00000503945 RAB22AQ9UL26 194 aa9.37□□□□□ -0.91
MED28-203ENST00000503945 WSB1Q9Y6I7 421 aa9.37□□□□□ -0.91
MED28-203ENST00000503945 V9GY05 133 aa9.37□□□□□ -0.91
MED28-203ENST00000503945 SAA2-SAA4A0A096LPE2 208 aa9.36□□□□□ -0.91
MED28-203ENST00000503945 TRBV6-6A0A0A6YYG2 114 aa9.36□□□□□ -0.91
MED28-203ENST00000503945 ERICH4A6NGS2 130 aa9.36□□□□□ -0.91
MED28-203ENST00000503945 H7C2Y5 167 aa9.36□□□□□ -0.91
MED28-203ENST00000503945 ITGB1BP1O14713 200 aa9.36□□□□□ -0.91
MED28-203ENST00000503945 ST8SIA5O15466 376 aa9.36□□□□□ -0.91
MED28-203ENST00000503945 DENRO43583 198 aaKnown RBP9.36□□□□□ -0.91
MED28-203ENST00000503945 SAA2P0DJI9 122 aaPredicted RBP9.36□□□□□ -0.91
MED28-203ENST00000503945 CT45A6P0DMU7 189 aa9.36□□□□□ -0.91
MED28-203ENST00000503945 CT45A5P0DMU8 189 aa9.36□□□□□ -0.91
MED28-203ENST00000503945 CT45A7P0DMV0 189 aa9.36□□□□□ -0.91
MED28-203ENST00000503945 CALRP27797 417 aaKnown RBP9.36□□□□□ -0.91
MED28-203ENST00000503945 HSPA13P48723 471 aa9.36□□□□□ -0.91
MED28-203ENST00000503945 MRPS15P82914 257 aaKnown RBP9.36□□□□□ -0.91
MED28-203ENST00000503945 FAM71F2Q6NXP2 309 aa9.36□□□□□ -0.91
MED28-203ENST00000503945 NPBQ8NG41 125 aa9.36□□□□□ -0.91
MED28-203ENST00000503945 OR56B1Q8NGI3 324 aa9.36□□□□□ -0.91
MED28-203ENST00000503945 OR5M8Q8NGP6 311 aa9.36□□□□□ -0.91
MED28-203ENST00000503945 EDARADDQ8WWZ3 215 aa9.36□□□□□ -0.91
MED28-203ENST00000503945 FAM3DQ96BQ1 224 aa9.36□□□□□ -0.91
MED28-203ENST00000503945 RNF5Q99942 180 aa9.36□□□□□ -0.91
MED28-203ENST00000503945 CMSS1Q9BQ75 279 aaKnown RBP9.36□□□□□ -0.91
MED28-203ENST00000503945 KCNK15Q9H427 330 aa9.36□□□□□ -0.91
MED28-203ENST00000503945 BLOC1S6Q9UL45 172 aa9.36□□□□□ -0.91
MED28-203ENST00000503945 A0A0A6YYD4 124 aa9.35□□□□□ -0.91
MED28-203ENST00000503945 PDCD5O14737 125 aa9.35□□□□□ -0.91
MED28-203ENST00000503945 RAMP3O60896 148 aa9.35□□□□□ -0.91
MED28-203ENST00000503945 HLA-DRB1P01911 266 aa9.35□□□□□ -0.91
MED28-203ENST00000503945 SCTP09683 121 aa9.35□□□□□ -0.91
MED28-203ENST00000503945 CNTFRP26992 372 aa9.35□□□□□ -0.91
MED28-203ENST00000503945 PSMB8P28062 276 aa9.35□□□□□ -0.91
MED28-203ENST00000503945 MAP2K4P45985 399 aa9.35□□□□□ -0.91
MED28-203ENST00000503945 TMEM50BP56557 158 aa9.35□□□□□ -0.91
MED28-203ENST00000503945 DGCR2P98153 550 aa9.35□□□□□ -0.91
MED28-203ENST00000503945 FABP5Q01469 135 aa9.35□□□□□ -0.91
MED28-203ENST00000503945 CFHR3Q02985 330 aa9.35□□□□□ -0.91
MED28-203ENST00000503945 TMEM267Q0VDI3 215 aaPredicted RBP9.35□□□□□ -0.91
MED28-203ENST00000503945 PLGLAQ15195 96 aa9.35□□□□□ -0.91
MED28-203ENST00000503945 C5orf64Q2M2E5 130 aa9.35□□□□□ -0.91
MED28-203ENST00000503945 ZNF660Q6AZW8 331 aaPredicted RBP9.35□□□□□ -0.91
MED28-203ENST00000503945 ARHGAP5-AS1Q96IT6 56 aa9.35□□□□□ -0.91
MED28-203ENST00000503945 ABHD14BQ96IU4 210 aa9.35□□□□□ -0.91
MED28-203ENST00000503945 UBE2E2Q96LR5 201 aa9.35□□□□□ -0.91
MED28-203ENST00000503945 CNBD2Q96M20 576 aa9.35□□□□□ -0.91
MED28-203ENST00000503945 GFI1Q99684 422 aa9.35□□□□□ -0.91
MED28-203ENST00000503945 AGMATQ9BSE5 352 aa9.35□□□□□ -0.91
MED28-203ENST00000503945 C11orf54Q9H0W9 315 aaPredicted RBP9.35□□□□□ -0.91
MED28-203ENST00000503945 IFI27L2Q9H2X8 130 aa9.35□□□□□ -0.91
MED28-203ENST00000503945 Q9N2K0 584 aa9.35□□□□□ -0.91
MED28-203ENST00000503945 ZNF221Q9UK13 617 aa9.35□□□□□ -0.91
MED28-203ENST00000503945 RNF150Q9ULK6 438 aa9.35□□□□□ -0.91
MED28-203ENST00000503945 TRAV41A0A0B4J266 112 aa9.34□□□□□ -0.91
MED28-203ENST00000503945 OR5H14A6NHG9 310 aa9.34□□□□□ -0.91
MED28-203ENST00000503945 TRDCB7Z8K6 153 aa9.34□□□□□ -0.91
MED28-203ENST00000503945 G3V318 75 aa9.34□□□□□ -0.91
MED28-203ENST00000503945 PPIFP30405 207 aaKnown RBP9.34□□□□□ -0.91
MED28-203ENST00000503945 RAB9AP51151 201 aa9.34□□□□□ -0.91
MED28-203ENST00000503945 CLDN12P56749 244 aa9.34□□□□□ -0.91
MED28-203ENST00000503945 DCTN2Q13561 401 aaKnown RBP9.34□□□□□ -0.91
MED28-203ENST00000503945 DEFB136Q30KP8 78 aa9.34□□□□□ -0.91
MED28-203ENST00000503945 RPL39P5Q59GN2 51 aa9.34□□□□□ -0.91
MED28-203ENST00000503945 OR11H1Q8NG94 326 aa9.34□□□□□ -0.91
MED28-203ENST00000503945 OR1N2Q8NGR9 330 aa9.34□□□□□ -0.91
MED28-203ENST00000503945 C4orf3Q8WVX3 66 aa9.34□□□□□ -0.91
MED28-203ENST00000503945 PTX4Q96A99 478 aa9.34□□□□□ -0.91
MED28-203ENST00000503945 PECRQ9BY49 303 aa9.34□□□□□ -0.91
MED28-203ENST00000503945 KLK15Q9H2R5 256 aa9.34□□□□□ -0.91
MED28-203ENST00000503945 C12orf4Q9NQ89 552 aa9.34□□□□□ -0.91
MED28-203ENST00000503945 PARP11Q9NR21 331 aa9.34□□□□□ -0.91
MED28-203ENST00000503945 VSIG4Q9Y279 399 aa9.34□□□□□ -0.91
MED28-203ENST00000503945 IGHV7-81A0A0B4J1V7 117 aa9.33□□□□□ -0.92
MED28-203ENST00000503945 TRAV1-2A0A0B4J238 106 aa9.33□□□□□ -0.92
MED28-203ENST00000503945 RRHO14718 337 aa9.33□□□□□ -0.92
MED28-203ENST00000503945 RBBP9O75884 186 aa9.33□□□□□ -0.92
MED28-203ENST00000503945 IGLV1-40P01703 118 aa9.33□□□□□ -0.92
MED28-203ENST00000503945 CD3GP09693 182 aa9.33□□□□□ -0.92
MED28-203ENST00000503945 CD40LGP29965 261 aa9.33□□□□□ -0.92
MED28-203ENST00000503945 SERPINB10P48595 397 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms