RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 ANXA10Q9UJ72 324 aa20.13■□□□□ 0.81
LSM6-202ENST00000502781 ANAPC10Q9UM13 185 aa20.13■□□□□ 0.81
LSM6-202ENST00000502781 STAB1Q9NY15 2570 aa20.12■□□□□ 0.81
LSM6-202ENST00000502781 SAA2-SAA4A0A096LPE2 208 aa20.12■□□□□ 0.81
LSM6-202ENST00000502781 CCDC160A6NGH7 325 aa20.12■□□□□ 0.81
LSM6-202ENST00000502781 TPPPO94811 219 aa20.12■□□□□ 0.81
LSM6-202ENST00000502781 SAA2P0DJI9 122 aaPredicted RBP20.12■□□□□ 0.81
LSM6-202ENST00000502781 DHRS7BQ6IAN0 325 aaPredicted RBP20.12■□□□□ 0.81
LSM6-202ENST00000502781 FAM71F2Q6NXP2 309 aa20.12■□□□□ 0.81
LSM6-202ENST00000502781 H1FOOQ8IZA3 346 aaPredicted RBP20.12■□□□□ 0.81
LSM6-202ENST00000502781 BEST4Q8NFU0 473 aa20.12■□□□□ 0.81
LSM6-202ENST00000502781 NXF2Q9GZY0 626 aaKnown RBP20.12■□□□□ 0.81
LSM6-202ENST00000502781 PIPOXQ9P0Z9 390 aa20.12■□□□□ 0.81
LSM6-202ENST00000502781 ADAM30Q9UKF2 790 aa20.12■□□□□ 0.81
LSM6-202ENST00000502781 FAM25AB3EWG3 89 aa20.11■□□□□ 0.81
LSM6-202ENST00000502781 FAM25CB3EWG5 89 aa20.11■□□□□ 0.81
LSM6-202ENST00000502781 FAM25GB3EWG6 89 aa20.11■□□□□ 0.81
LSM6-202ENST00000502781 RAB29O14966 203 aa20.11■□□□□ 0.81
LSM6-202ENST00000502781 TSPAN9O75954 239 aa20.11■□□□□ 0.81
LSM6-202ENST00000502781 EBI3Q14213 229 aa20.11■□□□□ 0.81
LSM6-202ENST00000502781 TMEM219Q86XT9 240 aa20.11■□□□□ 0.81
LSM6-202ENST00000502781 SNAPC3Q92966 411 aa20.11■□□□□ 0.81
LSM6-202ENST00000502781 LPLP06858 475 aa20.1■□□□□ 0.81
LSM6-202ENST00000502781 PRSS3P35030 304 aa20.1■□□□□ 0.81
LSM6-202ENST00000502781 OR3A3P47888 321 aa20.1■□□□□ 0.81
LSM6-202ENST00000502781 FOXL1Q12952 345 aa20.1■□□□□ 0.81
LSM6-202ENST00000502781 Q6ZSV7 163 aa20.1■□□□□ 0.81
LSM6-202ENST00000502781 LAX1Q8IWV1 398 aa20.1■□□□□ 0.81
LSM6-202ENST00000502781 GPX8Q8TED1 209 aa20.1■□□□□ 0.81
LSM6-202ENST00000502781 MRPS7Q9Y2R9 242 aaKnown RBP20.1■□□□□ 0.81
LSM6-202ENST00000502781 SNRNP70P08621 437 aaKnown RBP20.09■□□□□ 0.81
LSM6-202ENST00000502781 FAM106CPP0CH98 169 aa20.09■□□□□ 0.81
LSM6-202ENST00000502781 RAG2P55895 527 aa20.09■□□□□ 0.81
LSM6-202ENST00000502781 C16orf82Q7Z2V1 217 aa20.09■□□□□ 0.81
LSM6-202ENST00000502781 MOB3BQ86TA1 216 aa20.09■□□□□ 0.81
LSM6-202ENST00000502781 SPATA3Q8NHX4 192 aa20.09■□□□□ 0.81
LSM6-202ENST00000502781 CAPSLQ8WWF8 208 aa20.09■□□□□ 0.81
LSM6-202ENST00000502781 ABHD14BQ96IU4 210 aa20.09■□□□□ 0.81
LSM6-202ENST00000502781 GINS4Q9BRT9 223 aa20.09■□□□□ 0.81
LSM6-202ENST00000502781 SCPEP1Q9HB40 452 aa20.09■□□□□ 0.81
LSM6-202ENST00000502781 EXTL2Q9UBQ6 330 aa20.09■□□□□ 0.81
LSM6-202ENST00000502781 MMP24Q9Y5R2 645 aa20.09■□□□□ 0.81
LSM6-202ENST00000502781 RGS5O15539 181 aa20.08■□□□□ 0.81
LSM6-202ENST00000502781 PROP1O75360 226 aa20.08■□□□□ 0.81
LSM6-202ENST00000502781 OR2F2O95006 317 aa20.08■□□□□ 0.81
LSM6-202ENST00000502781 NAT1P18440 290 aa20.08■□□□□ 0.81
LSM6-202ENST00000502781 CD1BP29016 333 aa20.08■□□□□ 0.81
LSM6-202ENST00000502781 RBM14Q96PK6 669 aaKnown RBP20.08■□□□□ 0.81
LSM6-202ENST00000502781 C16orf95Q9H693 158 aa20.08■□□□□ 0.81
LSM6-202ENST00000502781 RANBP3Q9H6Z4 567 aaPredicted RBP20.08■□□□□ 0.81
LSM6-202ENST00000502781 AWAT1Q58HT5 328 aa20.08■□□□□ 0.8
LSM6-202ENST00000502781 RPL39P5Q59GN2 51 aa20.08■□□□□ 0.8
LSM6-202ENST00000502781 OR4F5Q8NH21 305 aa20.08■□□□□ 0.8
LSM6-202ENST00000502781 S1PR3Q99500 378 aa20.08■□□□□ 0.8
LSM6-202ENST00000502781 NABP2Q9BQ15 211 aa20.08■□□□□ 0.8
LSM6-202ENST00000502781 MRPL20Q9BYC9 149 aaKnown RBP20.08■□□□□ 0.8
LSM6-202ENST00000502781 NDUFA13Q9P0J0 144 aa20.08■□□□□ 0.8
LSM6-202ENST00000502781 GAB2Q9UQC2 676 aa20.08■□□□□ 0.8
LSM6-202ENST00000502781 IGHV3-72A0A0B4J1Y9 119 aa20.07■□□□□ 0.8
LSM6-202ENST00000502781 MEIS3P1A6NDR6 274 aa20.07■□□□□ 0.8
LSM6-202ENST00000502781 IGKV1D-33P01593 117 aa20.07■□□□□ 0.8
LSM6-202ENST00000502781 IGKV1-33P01594 117 aa20.07■□□□□ 0.8
LSM6-202ENST00000502781 LSAMPQ13449 338 aa20.07■□□□□ 0.8
LSM6-202ENST00000502781 SNX29P2Q8IUI4 249 aa20.07■□□□□ 0.8
LSM6-202ENST00000502781 ZNF436-AS1Q8NC38 126 aaPredicted RBP20.07■□□□□ 0.8
LSM6-202ENST00000502781 NPFFR1Q9GZQ6 430 aa20.07■□□□□ 0.8
LSM6-202ENST00000502781 RNF150Q9ULK6 438 aa20.07■□□□□ 0.8
LSM6-202ENST00000502781 A0A1B0GUS0 222 aa20.06■□□□□ 0.8
LSM6-202ENST00000502781 DPPA5A6NC42 116 aa20.06■□□□□ 0.8
LSM6-202ENST00000502781 ZNF736B4DX44 427 aaPredicted RBP20.06■□□□□ 0.8
LSM6-202ENST00000502781 SULT1C2O00338 296 aa20.06■□□□□ 0.8
LSM6-202ENST00000502781 TUSC2O75896 110 aa20.06■□□□□ 0.8
LSM6-202ENST00000502781 OR8U9P0C7N5 309 aa20.06■□□□□ 0.8
LSM6-202ENST00000502781 MDKP21741 143 aaPredicted RBP20.06■□□□□ 0.8
LSM6-202ENST00000502781 Q8N6K4 173 aa20.06■□□□□ 0.8
LSM6-202ENST00000502781 OR8U1Q8NH10 309 aa20.06■□□□□ 0.8
LSM6-202ENST00000502781 MCFD2Q8NI22 146 aa20.06■□□□□ 0.8
LSM6-202ENST00000502781 LINC01006Q8NI28 216 aa20.06■□□□□ 0.8
LSM6-202ENST00000502781 DGCR14Q96DF8 476 aaKnown RBP20.06■□□□□ 0.8
LSM6-202ENST00000502781 EAF1Q96JC9 268 aaPredicted RBP20.06■□□□□ 0.8
LSM6-202ENST00000502781 ABHD1Q96SE0 405 aa20.06■□□□□ 0.8
LSM6-202ENST00000502781 SLC25A33Q9BSK2 321 aa20.06■□□□□ 0.8
LSM6-202ENST00000502781 DCUN1D5Q9BTE7 237 aa20.06■□□□□ 0.8
LSM6-202ENST00000502781 C6orf62Q9GZU0 229 aaPredicted RBP20.06■□□□□ 0.8
LSM6-202ENST00000502781 IFT46Q9NQC8 304 aa20.06■□□□□ 0.8
LSM6-202ENST00000502781 OR2W1Q9Y3N9 320 aa20.06■□□□□ 0.8
LSM6-202ENST00000502781 CT45A6P0DMU7 189 aa20.05■□□□□ 0.8
LSM6-202ENST00000502781 CT45A5P0DMU8 189 aa20.05■□□□□ 0.8
LSM6-202ENST00000502781 CT45A7P0DMV0 189 aa20.05■□□□□ 0.8
LSM6-202ENST00000502781 ARPC4P59998 168 aa20.05■□□□□ 0.8
LSM6-202ENST00000502781 Q8N2B8 174 aa20.05■□□□□ 0.8
LSM6-202ENST00000502781 OR5AP2Q8NGF4 316 aa20.05■□□□□ 0.8
LSM6-202ENST00000502781 C15orf40Q8WUR7 153 aa20.05■□□□□ 0.8
LSM6-202ENST00000502781 AKR1E2Q96JD6 320 aa20.05■□□□□ 0.8
LSM6-202ENST00000502781 ZNF221Q9UK13 617 aa20.05■□□□□ 0.8
LSM6-202ENST00000502781 A3GALT2U3KPV4 340 aa20.05■□□□□ 0.8
LSM6-202ENST00000502781 AMY1AP04745 511 aa20.04■□□□□ 0.8
LSM6-202ENST00000502781 AMY2AP04746 511 aa20.04■□□□□ 0.8
LSM6-202ENST00000502781 FCER2P06734 321 aa20.04■□□□□ 0.8
LSM6-202ENST00000502781 TMEM11P17152 192 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms